KEGG   Garra rufa (doctor fish): 141301039
Entry
141301039         CDS       T11039                                 
Symbol
itga11b
Name
(RefSeq) integrin alpha-11
  KO
K06587  integrin alpha 11
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
grf04810  Regulation of actin cytoskeleton
grf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141301039 (itga11b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141301039 (itga11b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141301039 (itga11b)
   04810 Regulation of actin cytoskeleton
    141301039 (itga11b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:grf04515]
    141301039 (itga11b)
Cell adhesion molecules [BR:grf04515]
 Integrins
  Integrin alpha subunits
   141301039 (itga11b)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_2 FG-GAP_3 ITGAX-like_Ig_3 EIF3I
Other DBs
NCBI-GeneID: 141301039
NCBI-ProteinID: XP_073687392
LinkDB
Position
25:complement(4727200..4808390)
AA seq 1186 aa
MEYTYILLLWIAALMPGRWTCFNIDTRHAKIIKGSKEAQFGYTVQQHEADGQKWLLVGAP
FETSGEHQTGDVYRCPLDSKRATNCTRLHLGKISLNNVIERKDKMRLGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNSSFDFTHSIAPAYQRCETYMDIVIVLDGSNSIYPW
YEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTVEEVVAAAKNIDQRGGE
ETRTALAISEARSQAFKHGARPDAKKVMIVITDGESHDSPDLRKAVEESEKDNITLYGIA
VLGYYNRRGINPEAFLREIKFIATDPEEHFFSVTDESALKDIVDALGEKIFSLEGTNQNG
TAFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVIPPKSSYVKEFPEELK
NHGAYLGYMVSSVVSAQHGQLYIAGAPRFNHTGKVVIFTLTNSGNLTILYSLYGQQIGSY
YGSELAPIDLDGDGLTDLLLVGAPMYFYKGWEKGRVYIYTISLQGSFIPDGTLGPSEKTH
DSRFGAAMSTLPDLNGDGFSELVVGAPLEDNHKGAIYLFYGQQNNIQPKYKQRIAAGDIS
PGLRYFGRSVHGMMDVNGDELIDLSVGSLGAAVLLWSRSVVRVGISVHFEPSKINVFNKD
CSRGGREVSCMLATVCLNVTARTPMTDPKTVALRYSFGFEENGYFPRAVLDSTEDPQPRD
VTLRPNSDYCQKVYFHVHEVTDYTRPLIFTVDVGLQNTDEGPVLDDGWPTSLQSELPFWN
GCDNDDQCIPNLILQSSSDLLDRRQFCGRRERSSWPPCVHQRMRTSGERLVEASRRKVLV
EARLENRGENAYGTILHITHSPNLQFSSLVVKAPSDIAIECLSSDDTSLYRTCNVSAPFM
KSFAQVYFRLEFEFSRSVFLNYVQITLRVSSEGEEMSLEDNISDIYHNLKYEADILFTRD
SSPSRFEIKPELGQSVPVGTGPPFNLSYQIQNLGTFPISELLFTLNVFAVTRNANALLHL
SDLDVDQTARSHCSVPRVITAGSSSQEDLSLNPHMNASTSDTLFAQCRINLLPQGDVSIT
ATGWLNLHTLLAVKFKRLDLVMTAAVELNPSSPMFLHEERPMRHIILEIRKEEDYRIPIW
VIVGSTLGGLQLLALLVLALWKLGFFHRQKRKREEQATNEKTAEDR
NT seq 3561 nt   +upstreamnt  +downstreamnt
atggagtacacttacatcctgctgctgtggatcgccgctctgatgccagggcggtggacc
tgctttaatattgacaccagacatgcaaaaatcatcaagggttcgaaggaggctcagttt
ggatatacggtccaacaacacgaggcggatgggcagaaatggctcctggtcggagctccc
tttgagaccagcggtgaacaccagacaggagacgtctacagatgtccactagacagcaaa
cgtgctacgaactgcacaagactgcatttaggaaaaatatccttgaacaacgtgattgaa
cgcaaagacaaaatgaggctgggaatgactctcacctccaacccgaaagacaacagcttt
gtggcgtgtgggccgctgtggtcgtatgagtgtggaagttcctactacagcaccggcatc
tgttcaagagtcaacagcagctttgacttcacccacagcatcgctccagcctatcaaaga
tgcgagacctacatggacatagtaattgtgttagatggatccaactccatctacccctgg
tatgaggttcaagatttcctgataaatgtgctacagaagttttacatcggtccaggacag
atccaggttggggtggtccagtacggtgagagagtggtgaacgagtttcggctggatgat
ttccgcacggttgaggaggttgtagcagctgcgaagaatatcgaccagcgaggcggagag
gaaacacgcacagctctcgcgatcagtgaagctcgaagtcaagcattcaaacacggagct
cgtccagacgccaagaaagttatgattgtcatcaccgatggagaatcgcacgacagccca
gacctacggaaagccgtggaggaaagtgaaaaggataatattacgttgtacggtattgcg
gttctcggctactacaacaggcgaggaatcaatcctgaagcttttctgagggaaatcaag
ttcatcgccactgatcctgaggagcacttcttcagcgtcactgatgagtctgccctgaag
gatattgttgatgctctgggagagaagatcttcagcttggagggcaccaaccagaacggt
acggcctttggtttgcagatgtctcaagctggattctcgtcacatatcgtagaggacggg
attctggttggtgccgttggggcgtacgactggaacggagctgttctgaaggagacccgt
catggtaaagtcatcccacccaagtcttcgtatgtgaaagagttcccagaggagctgaag
aaccacggagcgtacttggggtacatggtgtcatcggtggtctcggctcaacatggtcag
ctatacatcgctggagctcctcgattcaaccacacggggaaagtcgtcatcttcacactg
accaacagcggcaatctcaccatactgtactcactgtacggacagcagatcggatcgtat
tatggaagtgagctggcaccgattgatctggatggcgatggattgacagatcttttactg
gtcggagctcccatgtacttctacaaaggctgggagaaaggccgagtttacatctacacc
atcagcttacagggctcttttataccagacgggactcttgggccatcagaaaagactcat
gattcccggtttggcgctgctatgtccacccttccggacttgaatggtgacggcttcagt
gagctggttgtgggcgcaccactggaggacaatcataaaggagccatctatctcttctac
ggccaacaaaacaacatccaacccaaatacaaacagagaatagccgctggtgacatctct
ccaggactccgttatttcggccgcagtgttcatgggatgatggatgtgaatggagatgag
ctcatagatctgtccgtggggtctctaggggccgcggttctgctttggtctcgcagtgtc
gtccgtgtggggatcagcgttcattttgagccttcaaaaatcaacgtttttaataaagac
tgcagtcgaggaggtcgagaggtgtcgtgtatgttggccacggtttgcctgaacgtgacg
gcgcggacacccatgacggatccaaaaacagtcgcgctgaggtacagctttggttttgag
gagaacggttatttccccagagccgtgttagacagcaccgaagacccacagccaagagac
gtcacccttcgaccaaactcagattactgccagaaagtgtatttccacgttcatgaagtg
acagactacacaagacccctgatcttcactgttgacgtcggcctgcagaacacagatgaa
gggccggttctggatgacgggtggcccaccagcctgcagtcagagcttccgttctggaac
ggttgtgataatgacgatcagtgcattcccaacctcatcctgcagagcagctctgaccta
ttagatcgcaggcagttctgtgggcgtcgcgagcgctcctcgtggccgccttgtgtccat
cagaggatgaggacgagcggggagcgtttagtggaggccagccggaggaaagttctggtg
gaggcgcgtttggagaaccgaggagagaacgcatacggcacgatcctgcacatcacgcat
tctccaaacctccagttctccagtctggtggtgaaggcaccctcagatattgcaatcgag
tgtctgagctctgacgatacgagtctctaccgaacctgcaacgtcagtgcgccgttcatg
aagtcattcgctcaggtgtattttcgactggagtttgagttcagcagatctgtcttcttg
aactacgtccagatcaccttgagagtctccagtgaaggtgaagaaatgtctctggaggac
aacatcagtgacatatatcataatctgaaatatgaggctgatattctcttcacaagggat
tccagcccgtcccgttttgagatcaaacctgagcttggccagagcgtcccagttgggacc
ggaccgcctttcaatctctcttatcagatccagaatctcggcacgtttcccatatctgag
cttctcttcacgttaaacgtcttcgctgtgaccagaaacgcaaacgctctcctgcacctc
tcagacttggatgtcgatcagacggctcgctcgcattgcagcgttccacgtgtcattacc
gccggctcttcctcgcaggaggatctctccctcaacccgcacatgaatgcatccaccagc
gacacgttatttgcacagtgtagaatcaacctgcttccccaaggagacgttagtatcacc
gcgacaggatggctcaatctgcatactttattagccgtgaaatttaaacggttagatctg
gtaatgacagctgcagttgaattgaacccctcaagtccgatgttcctccacgaggaacgt
cccatgagacatataatcctggagattaggaaggaggaagattaccgaatccccatctgg
gtgattgttgggagcacattgggaggactgcagcttctggctctgctcgtactggcactc
tggaagctcggattcttccacagacagaagagaaagagggaagagcaggcgaccaatgag
aagacagcagaggatcggtaa

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