Garra rufa (doctor fish): 141301186
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Entry
141301186 CDS
T11039
Symbol
lsp1a
Name
(RefSeq) uncharacterized protein lsp1a isoform X1
KO
K12327
caldesmon
Organism
grf Garra rufa (doctor fish)
Pathway
grf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
141301186 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141301186 (lsp1a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141301186 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
141301186
NCBI-ProteinID:
XP_073687530
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Position
25:complement(31922774..31981134)
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AA seq
568 aa
AA seq
DB search
MSSAIIRRSSSKQGLQNLLRVTAQRSMEDAEEIERERRRRAREAFRSQQSLSGSAGSPQD
SVNPPETGLYESEFKPSSPIAVDEDEGFSDWSQKLERRTRSKMEENGSGEELQQEEKDKE
RSRQSEKSSFKTSIQYQQIQDREDEEKRPETRRSAERRMEISERVSSPKPEEWRDDMRDC
KRQQEIKPQMENKVKEEKKEVKVSYTSKVFLQQERTPNGNGVAAAEEMTSHLVKTKRSPS
RTVDVDQTFDTKKDMHAGLETELKLEKIRRSHQEKENQEMEQLRQRQAEAELELEELKKK
REERRKTREEEERRREEEEQEKLARKEEDKRQMKEDIERRRMEAAEKRMKNLNITSTDGD
DPFNTLNPISPTFKITERTESLNRSLKKSNSFKKTQRPVLLPKIDDKLEQYTHAIEISSK
EAKMTKAAAVDMPSVSAPVASKKNMFEAGEAWSPSSPKGTPMKDADCVKVGVANLINHWV
KGSPEGGNRNSPSTPSDVKPGDVLQKKNMWEIIGEGSAAERSGLGGKGSSSGKQYKFVVT
GHGKYEKISKTGDHYSAYPNGKSGEFFQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgcaatcataagacgaagctccagcaagcaaggcttgcagaacctcctgaga
gtgacggctcagagaagtatggaagatgctgaggagatcgagagagaaaggcgacgtcgg
gcccgggaggccttccgcagtcaacaaagcctgtctggatctgctggttcccctcaggac
agtgtgaaccctcctgagactggcctctatgaaagtgaattcaaacctagcagtcctatt
gctgtggatgaggatgaaggtttcagcgactggtcccagaagctggaacggagaacacgg
tccaaaatggaagagaacggcagtggagaagagttacagcaagaggagaaagacaaagag
agatctagacaaagtgagaaaagcagcttcaagacttccatacagtaccagcaaatacag
gacagggaggatgaagagaagaggccagagacgaggaggagtgctgagagacgtatggag
atcagtgagagggtgagcagtccaaaaccagaggaatggcgtgacgacatgagagactgt
aaaagacaacaggaaatcaaaccacagatggagaacaaggtgaaagaggagaagaaggag
gtgaaggtgtcgtacacgtccaaagtcttcctacagcaagaaagaacgcctaacggcaat
ggcgtggcagctgcagaggaaatgacatcacatctggtcaaaaccaaaagatcacccagc
agaactgtagatgtagatcagacctttgacactaagaaggacatgcacgctggtttggag
accgagctgaagctggagaagatcagacgtagccatcaggaaaaagagaaccaggagatg
gagcagctacggcagcgtcaggccgaagctgagctggagctggaggaactaaagaagaag
agagaagagcgacgcaaaactcgtgaagaggaggagcgaagaagagaggaagaagaacag
gagaaactagccagaaaagaggaggacaagagacagatgaaggaagacattgagaggagg
aggatggaagcagcagagaagagaatgaagaatctcaacatcacttccacagatggcgat
gatccatttaacacgctaaaccccataagtccaactttcaagatcacagagagaacagaa
tccttgaatcgatcattaaagaagagtaacagtttcaagaagacccagagacctgtactc
ctgcccaagattgatgacaaactggaacaatacacccatgcaatcgagatctcatctaaa
gaagcaaagatgactaaagcagcagcagtggacatgcccagtgtctctgcccctgtggcc
tccaaaaaaaacatgtttgaagcaggagaagcctggagtccaagcagcccaaaaggaaca
cctatgaaggatgcagactgtgtgaaagtgggtgtagcaaacctgatcaaccattgggtg
aaaggaagtccagaaggcgggaacagaaactccccttccacaccatctgatgttaaacct
ggagatgttcttcagaagaagaacatgtgggaaattattggagaaggttctgcagccgag
aggtcaggactgggaggaaagggctcctcctcaggtaaacagtacaagtttgttgtgaca
ggccatggaaaatacgagaagatttccaagactggtgatcattacagtgcctacccgaat
ggaaaatcaggtgaatttttccagtga
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