Garra rufa (doctor fish): 141301245
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Entry
141301245 CDS
T11039
Symbol
dhtkd1
Name
(RefSeq) 2-oxoadipate dehydrogenase complex component E1
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00310
Lysine degradation
grf00380
Tryptophan metabolism
grf00785
Lipoic acid metabolism
grf01100
Metabolic pathways
grf01210
2-Oxocarboxylic acid metabolism
Module
grf_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
141301245 (dhtkd1)
00380 Tryptophan metabolism
141301245 (dhtkd1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
141301245 (dhtkd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
grf03029
]
141301245 (dhtkd1)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
141301245 (dhtkd1)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
Motif
Other DBs
NCBI-GeneID:
141301245
NCBI-ProteinID:
XP_073687602
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All DBs
Position
25:complement(11172203..11189522)
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AA seq
922 aa
AA seq
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MSAGIMLINLHRLLHRARRPFLASLYHTQRGVYGFRPRDIPEKDTRLPQISALNQDHGLA
RLVEAYRAHGHKAAKINPLLPQTPVMDSVPEISLLNGAVHGVLNTTGLRHFGKAEATSEE
VVSYLENTYCGRISVETTQLQSLQEREWFADRFEELKKEAFSPEERRQLAKLMLESQEFD
HFLATKFATVKRYGGEGAESMMGFFYEVFRSAAYSGVTDVVMGMPHRGRLNLLTGLLQFP
SELMFRKMRGLSEFPENSPSIGDVLSHLTSTVELDFGAGHPLHVTMLPNPSHLEAINPVT
QGKTRGRQQVKQDGDYSTETHARPGDKVICLQVHGDASFSGQGIVPETFTLSNLPHYRVG
GSIHLIVNNQVGYTTPSERGRSSLYCSDVGKMVGCAIIHVNGDDAEEVLRATRLAVEYQR
RFRKDVIVDLLCYRQWGHNELDEPFFTNPAMYKIIRSRKSIPDSYADQLISEGLMTEEER
SQTKTTYYAMLNDRLNNMTLYSPPPTNLQGRWGDLVEPQNRVSFWDTGVSVPLLQFVGAK
SVDIPVEIQLHSHLRKTHVQARLQKLEEGTKLDWSTAEAMAFGSLLCQGFDIRVSGQDVG
RGTFSQRHVMVVCQETNDMYIPLNHINSEQKGHMEVCNSALSEEAVLGFEYGMSIAQPRL
LPIWEAQFGDFFNGAQIIFDTFLSGGEAKWLLQSGLVILLPHGYDGAGPEHSSCRIERFL
QLCDSKEEGVDSDTVNMAVVNPTLPAQYFHLLRRQMIRNFRKPLIVASPKTLLRFSGAVS
SLADMGPGTSFKPVIGDTSVNPASVQRILFCSGKHYYALLKHRETLPQAEKKTALIRVEE
LCPFPTEALQQELNKYTNAKEFIWTQEEPQNMGCWSFVSPRFEKQLACKLRLVSRPALPA
PAVGIGTMHHQQHEAIVTASFS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggcattatgcttataaacctacatcgacttttgcaccgtgccagacggccg
tttttagcgagtttataccacactcagaggggagtatatggtttcagaccgagggatatt
ccggagaaagacacccggcttccgcagatctccgcgcttaaccaagatcacgggctggcg
agactggtggaggcctatcgagcacatggacacaaagcagctaaaattaacccgttactc
cctcaaacgcctgtgatggacagcgtgccggagattagcctgttgaacggagccgttcat
ggggtcctcaacaccactggattgcggcattttgggaaagctgaagcaacatccgaagaa
gtggtttcctatctggagaacacatactgtgggagaatctcagtggaaaccactcagctc
cagagcttgcaagaaagagaatggtttgcagaccggtttgaggagctcaagaaagaggcg
ttttccccggaggagagaagacagctggcaaaactgatgcttgaatcacaggaatttgac
cactttctagccaccaagtttgccacggtcaagcgatatggaggtgagggagcagagagc
atgatgggatttttctacgaggtgtttcgctctgcggcgtacagtggagtgacagatgtg
gtcatgggaatgcctcaccgcggacgcctcaacctgcttacgggactactgcagttcccc
tcagagctcatgttccgtaagatgaggggtctcagcgagtttcctgagaactctccctct
attggagatgtgctgtcccatttgacctccacagtggagctggactttggggcaggacac
cctcttcatgtaactatgctgcctaacccctcacacctggaggccatcaaccctgtgacg
caaggaaagacccgtggccgtcagcaagtcaaacaggatggcgattactccactgagact
catgcacgaccaggagacaaagtcatctgcttgcaggttcacggcgatgcttcgttttca
ggccaaggcatagtgccagagaccttcaccctgtcaaatctcccccattatagagtaggt
ggaagcatccatctcatcgtaaacaatcaagtgggctacaccactccctcagagaggggc
cgatcatctttgtactgtagtgatgttggtaaaatggtgggatgtgcaataatccatgtg
aatggcgacgacgctgaggaggtcctcagggcgacccggctggccgtggaataccagcga
cgctttagaaaagacgttattgtagacctgctttgttaccgccaatgggggcacaacgag
ttggacgagccctttttcacaaaccccgcaatgtataaaattattaggtcaagaaaaagt
atcccagattcatatgctgaccagctcatctctgagggtctgatgacggaggaagagcgc
agtcagaccaagaccacctactacgctatgcttaacgaccggctaaacaacatgaccctc
tacagccctccgcccaccaacctccaggggcgctggggagacctggtggagccccagaac
agagtctcattctgggacacaggcgtatcggtgcccctgctgcagttcgtaggcgccaaa
tcagtagacatacctgtggagattcaattgcacagtcacctgagaaagactcacgtgcag
gcacgccttcaaaaactggaagagggcacaaaattggactggtccacagcggaagccatg
gcatttggctcattgctgtgccagggatttgatatccgtgtgagtggtcaggatgttggc
cggggtacattcagtcagcgccacgtgatggttgtgtgtcaggaaaccaacgacatgtac
atccccctcaatcacatcaactctgaacagaagggccacatggaggtgtgcaacagtgct
ctttctgaggaagctgttttagggtttgagtatggaatgagtattgctcagcctagactg
ctgcccatctgggaggcacagttcggagatttctttaacggcgcccagataatatttgac
actttcctctctggaggtgaggcgaaatggctcctgcagagtggattggtcattttactg
ccacacggatacgatggagccggaccagagcattcatcctgccgaatcgagcgtttctta
cagctctgtgacagtaaagaggaaggtgtggacagtgacacagtaaacatggcagtggtg
aatcctaccttgccagctcagtacttccaccttttacggagacagatgattagaaacttc
aggaaaccgctgattgtagcctcccctaagactctgctgcgcttttctggggcagtgtca
agcttggctgatatgggaccaggaacttcctttaagcctgtcattggtgatacttctgta
aaccctgcaagtgtgcagcggattctgttttgctcaggtaaacattactacgccctgctg
aaacatagagagacgttaccacaggcagaaaaaaaaacggcgctgatcagggtggaggaa
ctgtgtcctttccccacagaagccctacaacaggaactaaataaatacacaaacgccaaa
gagtttatctggactcaagaggagccacagaacatgggctgctggtcgtttgtatccccg
agattcgaaaaacagttagcctgcaagttgagattagtcagcagacctgcattacccgct
cctgccgtgggcatcggtaccatgcaccatcagcagcatgaagccatcgtgaccgcatcg
ttctcctga
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