Garra rufa (doctor fish): 141301249
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Entry
141301249 CDS
T11039
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
grf Garra rufa (doctor fish)
Pathway
grf03250
Viral life cycle - HIV-1
grf03272
Virion - Hepatitis viruses
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
141301249
03272 Virion - Hepatitis viruses
141301249
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141301249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141301249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141301249
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
141301249
Exosome [BR:
grf04147
]
Exosomal proteins
Proteins found in most exosomes
141301249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
DUF3450
Het-C
UQ_con
ANG-1
CC_Bre1
SlyX
FapA
Exonuc_VII_L
Prominin
Xpo1
FlaC_arch
Spc7
TPR_IF140_C
APG6_N
EMP24_GP25L
DUF5685
CCDC90-like
TcaA_2nd
DUF4200
Motif
Other DBs
NCBI-GeneID:
141301249
NCBI-ProteinID:
XP_073687604
LinkDB
All DBs
Position
25:29319940..29337055
Genome browser
AA seq
390 aa
AA seq
DB search
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPVMDPYVFNDGSSRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQPPYQAFQAAGPPNQSYMPGMPAVSPYGPNPN
PCGYPGYPYPGGNAYPATGGPAHYTSQTPVTTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEDMVSRLDQEVAEVDRNIELLKKKDEELSE
ALEKMENQSENNDIDDVIIPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcaacgaaggagctcttaaaaagatgctgaagcaatacaagtacagagat
ctcactgtcagagagataacaaacgtcatctctcagtacaaagacctcaaacctgttatg
gatccgtatgtgtttaatgacggatcgtccagagacttgatgagcctcacaggaactgtt
ccagttagttatagagggaatgtgtataatatccccgtgtgcttgtggctgctggatacg
tatccctacaatcctcctatatgctttgtgaagcccacaagtgcgatgatgatcaagacc
ggcaaacacatcgacgccaacggcaagatctacctgccatacctgcacgagtggaaacac
cctcagtcagatctgtacggcctcatccaggtcatgattgttgtgtttggtgaggagccg
cccgttttctccagacccaccacacaacctccttaccaggccttccaagcagccggaccc
ccgaaccagtcctacatgccaggaatgccagcagtatctccctatgggccgaacccaaac
ccctgtggttacccaggctacccttacccaggaggcaatgcttatcctgccacaggcggt
ccagcacattacacttcccagactcctgtcactactgtgggtccaagtcgtgatggtacc
atcggcgaagacaccatccgagcgtcgctgatctcagccgtgagcgataaactgcgctgg
agaatgaaggaggagatggacagagcacaagccgagctagacgccctgaagagaacagag
gaagacctgaagaaaggacaccagaagctggaagacatggtgtcccgcctggaccaggaa
gtggctgaggtggacagaaacatcgagctcctcaagaagaaggacgaggaactgagcgaa
gctctggagaagatggagaaccagtcggagaacaacgacatcgacgacgtgatcatcccg
acagcgccgctctacaaacagatcctgaacctgtacgcagaggagaacgccatcgaggac
accatcttctacctgggagaagccctgcgtagaggagtcatcgacctggaggtcttcctc
aagcatgtgcgtctgctgtcccggaagcagttccagctgcgagcgctcatgcagaaagcg
cgaaagacggccggactcagtgacctctactga
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