Garra rufa (doctor fish): 141301251
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Entry
141301251 CDS
T11039
Symbol
cald1b
Name
(RefSeq) caldesmon 1b isoform X1
KO
K12327
caldesmon
Organism
grf Garra rufa (doctor fish)
Pathway
grf04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
141301251 (cald1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141301251 (cald1b)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141301251 (cald1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
141301251
NCBI-ProteinID:
XP_073687606
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All DBs
Position
25:21666820..21714936
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AA seq
750 aa
AA seq
DB search
MDEDFDFERRRELRRQKREEMQREAEKMNSHDDDEEAARERRRRARQERLRNMENEESSN
TTTETNSTETSSLITSSAPGEDDDQDLLERIAKREERRQKRMQEALERQKELDPTITDEN
VTTDTTTEDEPSRRNGEQESSKNDVSSTETNSWKESEKKKEEEKIEESNTEVEESFTKKD
DLVPVTAAEEAKESPEKKDKPEEEDRPQRSHLREQESTEEKPKEPAVPNEEESNIETKEQ
TNADLASADLEKKEVEDESQISSQEPTKDAQIEVEFKVEPTTPQTEEVKLVEKEEQVKKP
EEKPVEVKTQIQDRASVKKDDEKPVKEQEKPHVLTEETPKKSIREVEVKTKTPKKEEEKP
QLKKEVEEKPLTPKKKIEDKPVTPKKEVEEKPKWKKEAEETKAKVEEKVKSKKEEVVEEK
LKPSFVRDKLKVSTKPQDVADSAAKAKKPEKTLSPTSLRSPDTEKQDPIAKLEAERKLQE
LKRRRNETDSEVLEKMKQKQQTAEAELEELKKKREERRKILEEEEKQKKQQLAEKKAKEE
EERRKMKEEIERRRAEAAEKKKQQEEAKEGSKAPFVAPKGASAKIGEKAEFLNKSALKSP
LKTSHTPLVCRIGNRLEQYTSAVQTKEVPKSPKSPVDVPGAEGMRSIKSMWEKGNVVNPT
PSPASPPAVTKETAGLNVGVAGRINSWKTKTPEPKPPEPKPAPEPEKPPAKTEQKPAEVT
KPRGPWETKGSTPAKVFAAKSKFVTNGTRK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggattttgattttgagcgccgcagagagttacggagacaaaagcgtgaagag
atgcagcgggaggcggagaagatgaactctcacgatgatgatgaggaggcggcccgggag
cgccggagacgagcccgtcaggaacgtctgcgcaatatggagaatgaagagtcgagtaat
actacaacagaaactaacagtacagagacatcctcattgatcactagttctgcaccaggc
gaggatgatgatcaggacctcttagagaggattgcgaagagagaagagcggagacagaaa
aggatgcaggaagctttggagagacagaaggaacttgatcccaccataacggatgaaaat
gttaccactgacaccaccacagaggacgagccaagtcgtagaaacggtgaacaagagtcc
tccaaaaatgatgtttcttcaacagaaaccaactcttggaaggaaagtgaaaagaaaaaa
gaggaggaaaagatagaggaaagcaacactgaagttgaggagagtttcacaaaaaaggat
gatctggtgccagtcacagcagcagaggaagccaaagaatctcctgagaagaaagacaaa
ccagaagaggaagatagaccacagaggtcccacctcagagaacaggaatccacagaggag
aaacccaaagaaccagctgttccaaatgaggaagaatcaaatatagaaactaaagaacaa
acaaatgcagatttagcaagtgcagatttagaaaagaaagaggttgaagacgaaagtcaa
atatcaagtcaagaaccaacaaaagatgcccaaatagaggtggaattcaaagtggagcca
accacaccacagaccgaagaggtgaagctggtggagaaagaagaacaggtaaagaaacct
gaagaaaaacctgttgaggtgaaaactcaaattcaagatagagcttcagtaaagaaggat
gatgagaaacccgtgaaggagcaagagaaaccccatgtactcactgaagaaacgccaaaa
aaatcaattagggaagttgaggtgaagaccaaaacccccaaaaaagaagaggagaaacca
cagctcaagaaggaggttgaagaaaaaccattaacacctaagaagaagattgaagacaaa
cctgtgactccaaagaaagaggttgaggaaaagcctaaatggaagaaagaggctgaagaa
acgaaggccaaagtagaagaaaaagtcaaatcaaagaaggaggaggttgtagaagaaaag
ctgaaaccttcctttgtacgtgacaaactgaaagtgtcaacaaagccgcaagatgtagct
gacagcgccgccaaggccaagaaaccagagaagacactaagtcccaccagcttgcgttct
cctgacacggagaagcaagatcccatcgccaagctggaggctgaacgcaagctgcaagag
ctgaagcgcaggcggaacgagacggacagcgaggtgctggagaagatgaagcagaagcag
caaactgcagaggccgagctggaggagctaaagaagaagagggaggaaagaaggaagatt
ctggaggaggaggagaagcagaagaaacagcagttggcagaaaagaaagccaaagaggag
gaagagaggaggaagatgaaggaagagattgagcgaaggagagcagaagcagcagagaaa
aaaaaacaacaggaggaggcgaaagaagggagcaaagcaccattcgtcgctccgaagggc
gcctctgcaaagattggagagaaagcagaatttctgaacaaatctgctctaaaaagtccg
ctgaagacgtcacacactccattagtttgcaggattggaaacagactagagcaatacact
tctgctgttcagaccaaagaagtgcccaaatcacccaaatcacctgtggatgtacctggg
gctgaagggatgcggagcatcaagagtatgtgggagaaggggaatgtggtcaatcccacc
ccgagtcctgcaagccccccagcggtcaccaaggaaacagctggtctgaatgttggtgtg
gctggtcgcattaacagctggaaaaccaagactccagaacccaaacctcctgaacccaaa
ccagctcctgaaccagaaaaaccacctgccaaaacagagcaaaagccagctgaggtcact
aaaccacgtggcccatgggaaacaaagggctccacacctgccaaggtgttcgcagccaag
agtaaatttgtcacaaacggaacaagaaaataa
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