Garra rufa (doctor fish): 141301308
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Entry
141301308 CDS
T11039
Symbol
myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
grf Garra rufa (doctor fish)
Pathway
grf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141301308 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141301308 (myo5c)
04131 Membrane trafficking [BR:
grf04131
]
141301308 (myo5c)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141301308 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141301308 (myo5c)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
141301308 (myo5c)
mRNA cycle factors
P-body specific factors
141301308 (myo5c)
Membrane trafficking [BR:
grf04131
]
Others
Actin-binding proteins
Myosins
141301308 (myo5c)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
141301308 (myo5c)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
141301308 (myo5c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
IQ
ATG16
AAA_22
AAA_16
NPHP3_N
Myosin_N
CCDC89
Motif
Other DBs
NCBI-GeneID:
141301308
NCBI-ProteinID:
XP_073687659
LinkDB
All DBs
Position
25:9051113..9076290
Genome browser
AA seq
1435 aa
AA seq
DB search
MALSELYTKYNRVWIPDTEHVWKSAEILTDFKSGDTVLEIQLEDGTELQYPLEGGDKLPP
LRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGD
AVIHAYAGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
VVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQLCACANQPEFKDLRLLGADKFNYTCLGGDTEIEGVDD
RTDMAETRRTFGLLGLKDSFQADVFKVLAAILHLGNVKIKENGSEKSSIGSRDPHLSIFC
ELMGVNMDNMCRWLCHRRIVLSAETVVKPQPKERAINARDALAKHIYAHLFNWVINKINQ
ALMVPGKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFLQGTDKNWLQKLYNFLSSNSLFEKPR
MSNDSFVIQHFADKVEYQCKGFLEKNRDTLYEELVGIMRTSQFAVLADFFKEEQPNSVHK
MIKVTPAHPRVKASNKQLRKTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYD
SKRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSQSERKLGEKKQTCKTVLQ
RLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDHLRTACVTIQKHVRGWRQRRRFLHMRQA
AITIQLYVRGKKQIRCTITALALKQGWAAVVIQRHCRGYLVRKIYQLVLRATVIIQAYTR
GWMARKRYRKMLAEHKAVVLQKYARAWLVRRRFQTMRRLVINVQLSFRVQQLRKKIEDQN
KENLGLMERLASLCNARSQGLEKIQALEVELGKLTNEKTALEERARTNSEEAHQTITLLQ
SDKQKLTEANKALEQKLKDTTLKMQDQFEDVKRKLMEDLERQERLRKVAEHNSELQKEDT
DKEIVVLKEESRRLREERIRLQTQVEEDKKVNVELQEQVLQLTKHVKVIPDLRKEINGLQ
MQRAEADKTMRAQKLQTRAKMSLITRQLLGEAKEENLIQRLNEEALENDDGADLLNAFDA
MEKAAKVMETHLREQKETHKSQLEALVFKNEHLNKENKQLQALFQEKSDVNQSIGQEVAR
LTAENMVIPELKQQVSELNRHKQDLETQSQAQSAEMSAKIKELSNELQFAVKEEQAQRKH
LEEKMTESERRGEEMERQMADLQEENEQLQKAQLSESEAKSKLRQETSRLTAENMDFEEQ
LDMKDRLXKRLKDQIRALQTHATANQKEAPAVPKEYLGMLEYKKEDESRLIRTLILELKP
RGVGVLMIPGLAAHLLFMCVRHSDYLNDGNKLKSLMNGIISGIKEVITCKYFLYG
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtatacaaagtataacagggtgtggatccctgacacggaacat
gtttggaaatctgcggagattttgacagatttcaagtctggtgatactgtgctggaaata
cagctggaagatgggacggagttgcagtatccgctggaagggggtgataagttgccaccc
cttcgtaacccggatatcctggtgggtgagaatgaccttacggcccttagttaccttcat
gagccggccgtgctacataacctcaaagtcagatttgtcgagtccaaaatcatctataca
tattgcggaattatcctggtggcagtcaatccatacaagcagcttcccatctatggagat
gcagtcatccacgcttacgctggtcaaaacatgggcgacctcgaccctcatatattcgct
gtggctgaagaggcctacaagcaaatggccaggaataacaagaatcagtccatcattgtg
agcggtgagtccggagctggaaagaccgtatctgctcgctatgctatgaggtacttcgct
gtggttagcaaatctggcagcaagactcgggtggaagataaagttttggcatccaaccca
atcactgaggccattggaaatgcaaaaacaaccagaaatgataacagcagtcgattcggg
aagtacacagagatcagctttgacaaaagataccaaatcattggtgctaatatgaggaca
taccttctggaaaagtcaagggtggtttttcagtcagagaatgagagaaattatcacatc
ttctaccaattgtgtgcttgtgcaaatcagccggagtttaaagacttaagactgttgggc
gcagacaagtttaactacacatgtttgggtggtgatacagagatcgagggtgtggacgac
cgcactgacatggcagaaacacgcagaacctttggtctactaggtcttaaggacagtttt
caggctgacgtgtttaaggtgctcgctgcgattctgcatttgggaaacgtaaaaatcaag
gaaaatggctctgagaaatcatccatcggttctagagaccctcacttatccatattttgt
gagctgatgggcgtcaacatggacaacatgtgccgctggctgtgtcacagacggatagtc
ctgtcagcagagacagtggtaaaaccgcagcccaaggagcgtgccatcaatgcccgtgat
gcccttgccaaacacatctacgcccatcttttcaactgggtcatcaacaagatcaaccag
gcactaatggtccctgggaagcaacattcatttattggggtgttggatatttatggattt
gagacctttgatattaacagttttgagcagttctgtatcaactacgccaatgagaagctg
cagcaacagttcaacctgcacgtctttaaactggagcaggaggagtacatgaaagaggac
attccatggacactgattgatttctacgacaatcagcctgttattgatctcatcgaggcc
aagatgggcatcctggaccttttggatgaggagtgtctgttcctgcaaggcactgataag
aactggctgcaaaagctgtataattttctaagctcaaactcgctgtttgagaaaccccgt
atgtctaatgactcttttgtgatccagcattttgctgataaggttgaataccagtgcaaa
ggttttttggagaagaacagagacacgctttatgaagagctggtgggcatcatgcgcacc
agtcagtttgctgtcttggcagatttttttaaagaggagcaaccaaattctgtgcataaa
atgattaaggtgacaccggcacatcccagagtcaaagcttcaaacaagcagctgagaaaa
accgtaggagacaagtttcgaagttccttgtacctgttaatggagacgctgaatgctact
acacctcattatgtgcgctgtattaaacccaatgaggagaaactgccatttgaatatgat
tcaaagcgtgtggtgcagcagctgagagcctgtggtgtgctggagaccatccgtatcagt
gcccagagttacccgtccaggtggacgtatatagagttttacagccgttacagtatctta
atgagccagtcagagcggaagctgggagagaagaagcagacgtgcaagacagttctgcag
agactcattcctgattccaaccagtacaagtttggtcggactaagatcttcttccgggca
ggacaggtggcgtacctggagaagctgcgtttggatcatcttcgcacggcttgcgtgacc
atccagaagcatgtgagaggctggaggcaaagacgcaggttcctgcacatgagacaagct
gccattactatccaactgtatgtgcgtggaaagaaacagatcagatgcaccataacagct
ttggcgctgaagcagggctgggccgctgtggtgattcagagacactgtcgtgggtatctg
gtacggaagatttaccagctcgtcctgagggctacagtcatcatacaggcctacaccaga
ggatggatggcccgcaagcgctacagaaagatgttggcagaacacaaggctgtggttctg
cagaaatacgcccgagcttggctggtgcgccggcgctttcaaaccatgcgacgactggtc
atcaacgtgcagctgtcgttccgagtccagcagctgcgcaagaaaatagaagatcagaat
aaagagaacctaggcctcatggaaagactcgccagtttgtgtaatgctcgatctcaagga
ctggaaaagattcaggctctggaggtggagcttggaaagctaaccaatgagaagacagct
ttagaggagagggcgagaacaaactctgaagaggcccatcagacaatcactctgcttcag
agtgacaaacagaaacttactgaggcgaataaggctttggagcagaaacttaaagacacg
accctgaagatgcaagatcaatttgaggatgtgaagagaaaactgatggaagatttagaa
agacaggagagactcagaaaggtggcggagcacaacagtgaactccagaaggaagacacg
gataaagagatcgtagtactgaaagaggaaagccgtagactgagggaggagcgcatcagg
ctccagacgcaagtagaggaggataagaaggtcaatgtggaactgcaggaacaagtgctg
cagctcaccaaacatgttaaggtcataccagatttacgaaaagaaatcaacggcctgcag
atgcagcgagctgaagctgataaaaccatgagagctcaaaaactacaaaccagagctaag
atgagcttgatcacgaggcagctactcggtgaagctaaagaggagaatctcatccaaaga
ctaaatgaagaagccttagagaatgatgatggagctgatcttctcaatgcttttgacgcc
atggagaaagctgctaaggtgatggaaactcatctgcgggagcagaaggaaactcacaag
agtcagctagaagctctggtcttcaaaaacgaacatctaaacaaagagaacaaacagctt
caagctctgtttcaagagaagagtgacgtcaaccaaagcatcggacaggaagtggcccgc
ctcactgccgagaacatggtgattccagaactaaagcagcaggtgtcagaattaaaccgc
cacaaacaagacctcgagacccagtcgcaagcacagagcgctgagatgagcgccaaaata
aaggagttatccaatgagcttcagtttgctgtcaaagaggagcaagcgcagcgcaagcac
ctggaggagaagatgacagagagcgagaggagaggagaagagatggaaagacagatggct
gacctccaggaggagaacgagcagctacagaaagcccagctctcggagagcgaagccaag
agcaaactcagacaggagacgtcacgcctcacagcggagaatatggactttgaggagcag
ctagacatgaaggacagactgnataaacgtctcaaagaccaaatcagagctcttcaaaca
catgcgacagccaatcagaaagaggcgccggctgtgcccaaagagtacttgggcatgttg
gaatacaagaaggaggatgaaagcaggctgatccggacgcttatactagagctgaaacct
cgcggtgtaggtgtgctaatgatccctggtctggctgcacatctcctcttcatgtgtgtg
agacattcagattacctcaatgatggaaacaagctcaagtctctcatgaacggcatcatc
tcaggcatcaaagaagtcatcacgtgcaaatacttcttgtatgggtga
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integrated database retrieval system
