Garra rufa (doctor fish): 141301430
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Entry
141301430 CDS
T11039
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141301430
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141301430
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
F5_F8_type_C
TMP_3
BNR_6
Motif
Other DBs
NCBI-GeneID:
141301430
NCBI-ProteinID:
XP_073687761
LinkDB
All DBs
Position
25:28460743..28504363
Genome browser
AA seq
1834 aa
AA seq
DB search
MGDQGKRHRMDKSRLQAPMIAAPARLQDECVGNSCYPNLGDLMVGRASQLTASSTCGLYR
PQNYCILGYLENERKCFICDSRSPYNLQYNPNSHRVENIITTFRPERKMRWWQSENGAHE
VSIQLDLESMFQFSHLILTFKSFRPAAMLVERSQDFGKTWKVFRYFAEDCANSFPGISEG
PANSIDDLICDSRYSGTEPSTDGEVVLKALDPSFDIHDPYDPTVQELITLTNLRVNFTRL
VTLGDTLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDSTRGDTFSESGMVHG
RCVCQHNTAGYNCERCQDFYHDAPWRPAGKTDSDVCRRCNCHGHSEKCHFDLARYLATGG
VSGGVCDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPAGSVDRGLCDPVTG
QCVCKQNVEGERCDRCKFGFYGFSREDPNGCQLCRCNFMGTIRTGNPCDQTTGTCICEPF
AFGPQCDQCLSGYWGLGNTVYGCLPCDCDIGGALRTECSSENGQCECRPNMVGRKCSEPA
PGYFLAPLDFYIYEAEHAAPVVEISPFIQAPPLVYPQEQIPVRPTKLPLCPSAPKPSPAP
YKVTEPPTVKPSSTPYNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRRTRRRRQGQ
RTIPFEPGSPLQVILRQRAPDHPVTWTGPGFVRVQDGAGLRFNVSNVPATLDYYVVVRYE
PESTDDWTAIVNVVSFGSGDRRCPYDPYDKMFTLPGSGRTATLDLPVCLSDSNKYHVDVT
FRKKPSRDPQSSSYILIDSMGLIPKVDSLSNFCSQSYLAEFQQYSCIELGAQAGEHTLPE
VCEKLIGSMSAFIHNGAVSCSCHHFGAHGSSCSKFDGQCQCKPNVIGRCCDSCAPLTYGL
GPNGCSQCNCDPSGSTAELCDQTTGQCSCREGVTGRRCDKCYPGYYGFPLCRRCQCNGLA
DICDPFTGNCVDCREHSMGPNCERCKDGYVGSPVSGQPCEPCLCPDLNGSGRFFAISCNK
DPLSGAPYCECLPGHTGLHCDSCAPGYYGDLRLPDTQCEECCCNNNIDPRDGDACDAVTG
ECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDTKCTAGSPCFCDQETGQC
PCRTGVIGTLCNECEDGYWNLDGESGCQPCDCDPEHALNHVCDKITGQCFCQPEYGGRKC
DECGPNHFGNPDIQCMSCDCNMEGTIYPACDPYTGECLCKPGVTGLFCDDCAPGHDINFP
ACEPCHDCYHLWENIVSDVRLDIERTETMMPCPEDDRPRSELQNLMDLLEKLQNLANLTA
KDELKKLEELLARIRNETETIDPNIIIIDPTVLLNTDIDNIRLEFNRLLKNLIEKTKEIP
VTDSKAINDILNKIKKLYDEFTDSEKKVEAAKKVQEASRKTRENATLELAKCRIGEMDKL
ERKVKALSVANLNEEVCGAPGDAECEKAKCGGALCGKCGGLACTGSFPISLNASKLAEMT
GKNITDLRSKLKEADAKLLSTSKMTNYIKDQAEDLMNKMNQTKNKYEKEKIDTKNLIEKL
KNYLRDELVKPEDIDKLANAVLSIQLPKSPDEIKDMIENIKRILANVTDFDDDLEHLEKQ
ARIAEDMKKRAKKILNRSKAINVSEIEKALSDTAKLNDKIFNDLGEATENNDIIRENVNE
TEPKLKNIEDNLNSTRAKKLLDEIKALKDKTEMNRAQGKEAKDAANAAVDSAKDTEKDLE
ELKEQFEKLKQNSTSQNVNEEVNERLKNITMDAETLAKNVEDKMKEIEDLEKRILDAAER
KEERMKDLEALQKEADDLRNFIVDKLEKYNLCST
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccaaggcaaacggcatcgcatggataagtctcgcttgcaggcgccaatgata
gcagctccagcccgcctccaagacgaatgcgtggggaattcatgttatcctaacctcggt
gacctcatggtgggccgcgcctcccagctcacggcttcctcaacctgtggactctacaga
ccacaaaactattgcatcctgggatacctagagaatgagcgcaagtgcttcatctgtgac
tccaggagcccctacaatctccaatacaatcctaacagccaccgcgtagagaacatcatc
accaccttccgacctgaacgcaagatgaggtggtggcagtccgagaatggtgcgcatgaa
gtcagcattcagttggatctggaatcaatgtttcagtttagtcatctgatattgacgttc
aagagtttccggcctgctgccatgttggtcgagaggtcacaagactttgggaaaacctgg
aaggttttccgttattttgctgaggactgtgccaactcattccccggtatctctgagggg
ccagcaaatagtattgatgaccttatctgcgatagtcgctactctggaacagagccgtcc
accgatggagaggtggtgttgaaagccttggatcccagttttgacatccatgatccatac
gaccctactgtacaagagctgatcaccctgacgaacctgcgagtaaacttcacccgcttg
gtcaccctgggcgatacgttgctcacacgacggaggaggaacccacaggacaagtactat
tatgccctctatgaaatggtggttcggggcagctgcttctgcaatggccatgccagtcaa
tgcattcctgtggacagcacacgtggagataccttcagtgagtccggcatggtgcatgga
agatgtgtttgccaacacaacaccgcagggtacaactgtgagcgctgtcaagacttctac
catgatgccccctggaggccagctggcaaaacagactcggatgtttgcagaaggtgcaac
tgtcatggtcattcagagaagtgtcactttgacttagcacgctacctggccaccggtggg
gttagtggtggtgtgtgtgatgactgcagaaacaaccgtgttgggtcccagtgtgagctg
tgtgggccgtattactaccaggaccctcaacgctctgtggacgaccccaatgcctgtata
ccttgtgaatgtgatcctgctggctcagtggaccgtggtctgtgtgatccagtgactggt
cagtgtgtatgtaaacaaaacgttgaaggagagcgctgtgaccgctgcaagtttggtttt
tacgggttcagccgggaggaccctaatggctgtcagttgtgtaggtgtaatttcatggga
acgatacgcactggcaacccttgtgatcagacaactggaacgtgcatctgcgagcctttt
gcttttggcccacagtgtgaccaatgtctgtcaggttactggggtctgggaaacactgtc
tatggctgcttaccctgcgactgtgacattggaggggcattgagaactgaatgttcctca
gagaatggccagtgtgaatgcaggcctaacatggtaggccgcaaatgtagtgagccggca
cctggatacttcctggctcctcttgatttctatatctatgaggctgagcatgcagcacct
gtggtggaaatttcaccatttatacaagcccctccattggtctacccccaggaacaaata
cctgtacggccaaccaagctccctctctgcccttctgctccaaaaccctccccagcgcct
tataaagtaaccgaacccccaacggtgaagccatcttcaacgccatacaacccccatgtc
acactacccatctgtgagcactactatagacaaaggggttatgacttcaagatcagtaat
ggcagggtcgtggtggtcaagcgtgagaaacgaagaactcgaagacgaagacaaggccag
aggacaatcccctttgaaccaggctcacctcttcaggtcatcctgcgacagcgtgcccca
gatcatcccgtcacttggactggaccgggttttgtgcgagttcaggatggggctggactt
agatttaatgtcagcaatgtaccagctactcttgactactatgtagttgtccgctatgaa
ccagagtccaccgatgattggacagctatcgtgaatgttgtatcatttggatcaggagat
agacgttgtccatatgacccgtatgacaaaatgtttactcttccaggctctggaaggaca
gccactctggatcttccagtatgcctcagtgatagtaataaataccatgtggacgtcact
tttagaaagaagcccagtcgtgaccctcagtccagctcatacatccttattgactctatg
ggtcttattcccaaagtggactctctgtcaaacttctgctcgcagtcatatctagctgag
tttcagcaatacagctgtattgagttgggcgcacaggcaggggagcacacccttcctgaa
gtatgtgagaagcttattggaagtatgtcagcttttattcacaatggtgcagtgtcttgt
agctgtcatcattttggagcacatggctcatcttgcagtaaattcgatggacagtgtcaa
tgcaaacccaacgttattggtcgctgctgtgattcctgtgctcctttgacatatgggctt
ggacccaatggctgctcacaatgtaactgtgatccgtccggctctaccgctgagctgtgt
gaccagacaactggtcagtgctcgtgtcgtgaaggagtaactggtcgtcgatgtgataaa
tgttatcctggttactacgggtttcccctgtgcagacgctgccaatgcaacgggttggct
gacatctgtgaccctttcactggaaactgtgtggactgcagggaacactccatgggaccc
aactgtgaaaggtgtaaggatggttatgttggtagccctgtctctgggcagccatgtgag
ccatgcttatgtccagatctgaatggaagtgggcgtttctttgccatttcctgcaacaag
gatccactctctggagcaccctactgtgaatgtctgcctggacatacaggcctacactgt
gactcctgcgctcctggttattatggtgacctgaggttgccagacacccaatgtgaggaa
tgttgttgcaacaataacatcgatcctcgtgacggcgatgcatgcgatgctgtaactggc
gaatgtttgcgctgcttacacaacacagagggaccgcgctgtcagagctgcaaacgtgga
tactatgggaatgcgctcgcccaagactgcaaagagtgttcttgtgaccgaaggggcaca
gatgacacaaagtgtacagctggaagcccctgtttctgtgaccaggaaactggccagtgc
ccatgtcgcacaggtgtcataggaaccctttgtaatgagtgtgaggatggatactggaac
ctggatggagaatctgggtgccagccctgcgactgtgacccagaacatgctctcaaccat
gtctgtgacaagatcacaggccagtgtttctgccagccagagtatggaggcagaaaatgt
gacgagtgtgggccgaatcactttggaaacccagatatacagtgcatgtcttgtgactgt
aacatggaaggcacaatttatccagcttgtgacccttacacgggtgagtgcttgtgtaag
ccaggggtgaccggccttttctgtgacgattgcgccccgggtcatgacataaactttcct
gcttgtgaaccctgccatgactgctaccacctctgggagaatattgtgtcagatgttaga
ctggatatcgagaggacagaaactatgatgccatgtcctgaagatgatcggcctagatct
gaactacaaaacttaatggatttgttggagaagctgcagaatctggctaacttgaccgcc
aaggatgagcttaagaagctagaggagctcttggcacgcattaggaatgaaacagagacc
attgacccaaacataatcattattgatccaaccgtactgctcaacactgacatcgacaat
atccgccttgagttcaacagactgttgaagaatctcatagagaagacaaaggagattcca
gtgacagactccaaagctattaatgatattttgaataagatcaaaaagctctatgacgaa
ttcactgacagtgagaagaaagtggaagcagctaaaaaggtccaagaagcctccaggaaa
acgagagagaatgctacattggaacttgcaaagtgtcgcataggagaaatggataagctg
gagagaaaagtaaaagctctgagtgttgccaacctcaacgaagaggtctgtggggctcca
ggcgatgcagaatgtgagaaggcgaaatgtggtggagctttgtgtgggaaatgtgggggg
ctggcctgtacagggagttttcccatcagcctcaatgcctccaaactggcagagatgacc
gggaagaacattactgatctgcgcagtaaactcaaggaagctgacgctaagcttttgagc
acatcgaaaatgactaattacatcaaagatcaagctgaggacctgatgaataaaatgaat
cagactaagaacaaatatgagaaggaaaagattgacaccaagaacctcatcgagaagctc
aagaactacttgagagatgagctggtgaagccagaggacattgacaaactggccaatgct
gtgttgtccattcagctgcccaagtcccctgatgagatcaaggacatgatagagaacatc
aagaggatcctggcaaatgtcaccgacttcgatgatgatctagagcacttggaaaaacaa
gcaagaattgctgaagacatgaaaaagagagccaaaaaaatcttgaacagatccaaggct
atcaatgtgagcgagatagagaaagcactcagtgatacagcaaagctcaatgacaagata
ttcaatgatttgggcgaggctacagaaaacaatgacattatcagggagaatgttaatgag
actgaacctaaactaaaaaatattgaggataatttgaattcgactcgtgccaaaaagtta
ctggatgaaatcaaggccttgaaggataaaacggagatgaacagagctcaggggaaggag
gccaaagatgctgccaatgcagcggtcgacagtgccaaagacaccgaaaaggatcttgag
gaactcaaagagcaatttgaaaaattaaaacagaatagcacaagccagaatgttaatgaa
gaggttaacgaacgtctgaagaacatcacaatggatgcggaaacgctggctaaaaatgtt
gaagataaaatgaaggaaattgaagacctggagaaaaggattctggatgcagctgagaga
aaagaggaaaggatgaaagatttggaggcactccagaaggaggcagatgacttgaggaac
tttattgttgacaaattggaaaaatacaatctgtgctccacttag
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