KEGG   Garra rufa (doctor fish): 141301430
Entry
141301430         CDS       T11039                                 
Name
(RefSeq) laminin subunit beta-4-like
  KO
K06245  laminin, beta 4
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141301430
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141301430
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMB1 LAMININ_IV_B EGF_LMN_ATRN LAMB4 F5_F8_type_C TMP_3 BNR_6
Other DBs
NCBI-GeneID: 141301430
NCBI-ProteinID: XP_073687761
LinkDB
Position
25:28460743..28504363
AA seq 1834 aa
MGDQGKRHRMDKSRLQAPMIAAPARLQDECVGNSCYPNLGDLMVGRASQLTASSTCGLYR
PQNYCILGYLENERKCFICDSRSPYNLQYNPNSHRVENIITTFRPERKMRWWQSENGAHE
VSIQLDLESMFQFSHLILTFKSFRPAAMLVERSQDFGKTWKVFRYFAEDCANSFPGISEG
PANSIDDLICDSRYSGTEPSTDGEVVLKALDPSFDIHDPYDPTVQELITLTNLRVNFTRL
VTLGDTLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDSTRGDTFSESGMVHG
RCVCQHNTAGYNCERCQDFYHDAPWRPAGKTDSDVCRRCNCHGHSEKCHFDLARYLATGG
VSGGVCDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPAGSVDRGLCDPVTG
QCVCKQNVEGERCDRCKFGFYGFSREDPNGCQLCRCNFMGTIRTGNPCDQTTGTCICEPF
AFGPQCDQCLSGYWGLGNTVYGCLPCDCDIGGALRTECSSENGQCECRPNMVGRKCSEPA
PGYFLAPLDFYIYEAEHAAPVVEISPFIQAPPLVYPQEQIPVRPTKLPLCPSAPKPSPAP
YKVTEPPTVKPSSTPYNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRRTRRRRQGQ
RTIPFEPGSPLQVILRQRAPDHPVTWTGPGFVRVQDGAGLRFNVSNVPATLDYYVVVRYE
PESTDDWTAIVNVVSFGSGDRRCPYDPYDKMFTLPGSGRTATLDLPVCLSDSNKYHVDVT
FRKKPSRDPQSSSYILIDSMGLIPKVDSLSNFCSQSYLAEFQQYSCIELGAQAGEHTLPE
VCEKLIGSMSAFIHNGAVSCSCHHFGAHGSSCSKFDGQCQCKPNVIGRCCDSCAPLTYGL
GPNGCSQCNCDPSGSTAELCDQTTGQCSCREGVTGRRCDKCYPGYYGFPLCRRCQCNGLA
DICDPFTGNCVDCREHSMGPNCERCKDGYVGSPVSGQPCEPCLCPDLNGSGRFFAISCNK
DPLSGAPYCECLPGHTGLHCDSCAPGYYGDLRLPDTQCEECCCNNNIDPRDGDACDAVTG
ECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDTKCTAGSPCFCDQETGQC
PCRTGVIGTLCNECEDGYWNLDGESGCQPCDCDPEHALNHVCDKITGQCFCQPEYGGRKC
DECGPNHFGNPDIQCMSCDCNMEGTIYPACDPYTGECLCKPGVTGLFCDDCAPGHDINFP
ACEPCHDCYHLWENIVSDVRLDIERTETMMPCPEDDRPRSELQNLMDLLEKLQNLANLTA
KDELKKLEELLARIRNETETIDPNIIIIDPTVLLNTDIDNIRLEFNRLLKNLIEKTKEIP
VTDSKAINDILNKIKKLYDEFTDSEKKVEAAKKVQEASRKTRENATLELAKCRIGEMDKL
ERKVKALSVANLNEEVCGAPGDAECEKAKCGGALCGKCGGLACTGSFPISLNASKLAEMT
GKNITDLRSKLKEADAKLLSTSKMTNYIKDQAEDLMNKMNQTKNKYEKEKIDTKNLIEKL
KNYLRDELVKPEDIDKLANAVLSIQLPKSPDEIKDMIENIKRILANVTDFDDDLEHLEKQ
ARIAEDMKKRAKKILNRSKAINVSEIEKALSDTAKLNDKIFNDLGEATENNDIIRENVNE
TEPKLKNIEDNLNSTRAKKLLDEIKALKDKTEMNRAQGKEAKDAANAAVDSAKDTEKDLE
ELKEQFEKLKQNSTSQNVNEEVNERLKNITMDAETLAKNVEDKMKEIEDLEKRILDAAER
KEERMKDLEALQKEADDLRNFIVDKLEKYNLCST
NT seq 5505 nt   +upstreamnt  +downstreamnt
atgggagaccaaggcaaacggcatcgcatggataagtctcgcttgcaggcgccaatgata
gcagctccagcccgcctccaagacgaatgcgtggggaattcatgttatcctaacctcggt
gacctcatggtgggccgcgcctcccagctcacggcttcctcaacctgtggactctacaga
ccacaaaactattgcatcctgggatacctagagaatgagcgcaagtgcttcatctgtgac
tccaggagcccctacaatctccaatacaatcctaacagccaccgcgtagagaacatcatc
accaccttccgacctgaacgcaagatgaggtggtggcagtccgagaatggtgcgcatgaa
gtcagcattcagttggatctggaatcaatgtttcagtttagtcatctgatattgacgttc
aagagtttccggcctgctgccatgttggtcgagaggtcacaagactttgggaaaacctgg
aaggttttccgttattttgctgaggactgtgccaactcattccccggtatctctgagggg
ccagcaaatagtattgatgaccttatctgcgatagtcgctactctggaacagagccgtcc
accgatggagaggtggtgttgaaagccttggatcccagttttgacatccatgatccatac
gaccctactgtacaagagctgatcaccctgacgaacctgcgagtaaacttcacccgcttg
gtcaccctgggcgatacgttgctcacacgacggaggaggaacccacaggacaagtactat
tatgccctctatgaaatggtggttcggggcagctgcttctgcaatggccatgccagtcaa
tgcattcctgtggacagcacacgtggagataccttcagtgagtccggcatggtgcatgga
agatgtgtttgccaacacaacaccgcagggtacaactgtgagcgctgtcaagacttctac
catgatgccccctggaggccagctggcaaaacagactcggatgtttgcagaaggtgcaac
tgtcatggtcattcagagaagtgtcactttgacttagcacgctacctggccaccggtggg
gttagtggtggtgtgtgtgatgactgcagaaacaaccgtgttgggtcccagtgtgagctg
tgtgggccgtattactaccaggaccctcaacgctctgtggacgaccccaatgcctgtata
ccttgtgaatgtgatcctgctggctcagtggaccgtggtctgtgtgatccagtgactggt
cagtgtgtatgtaaacaaaacgttgaaggagagcgctgtgaccgctgcaagtttggtttt
tacgggttcagccgggaggaccctaatggctgtcagttgtgtaggtgtaatttcatggga
acgatacgcactggcaacccttgtgatcagacaactggaacgtgcatctgcgagcctttt
gcttttggcccacagtgtgaccaatgtctgtcaggttactggggtctgggaaacactgtc
tatggctgcttaccctgcgactgtgacattggaggggcattgagaactgaatgttcctca
gagaatggccagtgtgaatgcaggcctaacatggtaggccgcaaatgtagtgagccggca
cctggatacttcctggctcctcttgatttctatatctatgaggctgagcatgcagcacct
gtggtggaaatttcaccatttatacaagcccctccattggtctacccccaggaacaaata
cctgtacggccaaccaagctccctctctgcccttctgctccaaaaccctccccagcgcct
tataaagtaaccgaacccccaacggtgaagccatcttcaacgccatacaacccccatgtc
acactacccatctgtgagcactactatagacaaaggggttatgacttcaagatcagtaat
ggcagggtcgtggtggtcaagcgtgagaaacgaagaactcgaagacgaagacaaggccag
aggacaatcccctttgaaccaggctcacctcttcaggtcatcctgcgacagcgtgcccca
gatcatcccgtcacttggactggaccgggttttgtgcgagttcaggatggggctggactt
agatttaatgtcagcaatgtaccagctactcttgactactatgtagttgtccgctatgaa
ccagagtccaccgatgattggacagctatcgtgaatgttgtatcatttggatcaggagat
agacgttgtccatatgacccgtatgacaaaatgtttactcttccaggctctggaaggaca
gccactctggatcttccagtatgcctcagtgatagtaataaataccatgtggacgtcact
tttagaaagaagcccagtcgtgaccctcagtccagctcatacatccttattgactctatg
ggtcttattcccaaagtggactctctgtcaaacttctgctcgcagtcatatctagctgag
tttcagcaatacagctgtattgagttgggcgcacaggcaggggagcacacccttcctgaa
gtatgtgagaagcttattggaagtatgtcagcttttattcacaatggtgcagtgtcttgt
agctgtcatcattttggagcacatggctcatcttgcagtaaattcgatggacagtgtcaa
tgcaaacccaacgttattggtcgctgctgtgattcctgtgctcctttgacatatgggctt
ggacccaatggctgctcacaatgtaactgtgatccgtccggctctaccgctgagctgtgt
gaccagacaactggtcagtgctcgtgtcgtgaaggagtaactggtcgtcgatgtgataaa
tgttatcctggttactacgggtttcccctgtgcagacgctgccaatgcaacgggttggct
gacatctgtgaccctttcactggaaactgtgtggactgcagggaacactccatgggaccc
aactgtgaaaggtgtaaggatggttatgttggtagccctgtctctgggcagccatgtgag
ccatgcttatgtccagatctgaatggaagtgggcgtttctttgccatttcctgcaacaag
gatccactctctggagcaccctactgtgaatgtctgcctggacatacaggcctacactgt
gactcctgcgctcctggttattatggtgacctgaggttgccagacacccaatgtgaggaa
tgttgttgcaacaataacatcgatcctcgtgacggcgatgcatgcgatgctgtaactggc
gaatgtttgcgctgcttacacaacacagagggaccgcgctgtcagagctgcaaacgtgga
tactatgggaatgcgctcgcccaagactgcaaagagtgttcttgtgaccgaaggggcaca
gatgacacaaagtgtacagctggaagcccctgtttctgtgaccaggaaactggccagtgc
ccatgtcgcacaggtgtcataggaaccctttgtaatgagtgtgaggatggatactggaac
ctggatggagaatctgggtgccagccctgcgactgtgacccagaacatgctctcaaccat
gtctgtgacaagatcacaggccagtgtttctgccagccagagtatggaggcagaaaatgt
gacgagtgtgggccgaatcactttggaaacccagatatacagtgcatgtcttgtgactgt
aacatggaaggcacaatttatccagcttgtgacccttacacgggtgagtgcttgtgtaag
ccaggggtgaccggccttttctgtgacgattgcgccccgggtcatgacataaactttcct
gcttgtgaaccctgccatgactgctaccacctctgggagaatattgtgtcagatgttaga
ctggatatcgagaggacagaaactatgatgccatgtcctgaagatgatcggcctagatct
gaactacaaaacttaatggatttgttggagaagctgcagaatctggctaacttgaccgcc
aaggatgagcttaagaagctagaggagctcttggcacgcattaggaatgaaacagagacc
attgacccaaacataatcattattgatccaaccgtactgctcaacactgacatcgacaat
atccgccttgagttcaacagactgttgaagaatctcatagagaagacaaaggagattcca
gtgacagactccaaagctattaatgatattttgaataagatcaaaaagctctatgacgaa
ttcactgacagtgagaagaaagtggaagcagctaaaaaggtccaagaagcctccaggaaa
acgagagagaatgctacattggaacttgcaaagtgtcgcataggagaaatggataagctg
gagagaaaagtaaaagctctgagtgttgccaacctcaacgaagaggtctgtggggctcca
ggcgatgcagaatgtgagaaggcgaaatgtggtggagctttgtgtgggaaatgtgggggg
ctggcctgtacagggagttttcccatcagcctcaatgcctccaaactggcagagatgacc
gggaagaacattactgatctgcgcagtaaactcaaggaagctgacgctaagcttttgagc
acatcgaaaatgactaattacatcaaagatcaagctgaggacctgatgaataaaatgaat
cagactaagaacaaatatgagaaggaaaagattgacaccaagaacctcatcgagaagctc
aagaactacttgagagatgagctggtgaagccagaggacattgacaaactggccaatgct
gtgttgtccattcagctgcccaagtcccctgatgagatcaaggacatgatagagaacatc
aagaggatcctggcaaatgtcaccgacttcgatgatgatctagagcacttggaaaaacaa
gcaagaattgctgaagacatgaaaaagagagccaaaaaaatcttgaacagatccaaggct
atcaatgtgagcgagatagagaaagcactcagtgatacagcaaagctcaatgacaagata
ttcaatgatttgggcgaggctacagaaaacaatgacattatcagggagaatgttaatgag
actgaacctaaactaaaaaatattgaggataatttgaattcgactcgtgccaaaaagtta
ctggatgaaatcaaggccttgaaggataaaacggagatgaacagagctcaggggaaggag
gccaaagatgctgccaatgcagcggtcgacagtgccaaagacaccgaaaaggatcttgag
gaactcaaagagcaatttgaaaaattaaaacagaatagcacaagccagaatgttaatgaa
gaggttaacgaacgtctgaagaacatcacaatggatgcggaaacgctggctaaaaatgtt
gaagataaaatgaaggaaattgaagacctggagaaaaggattctggatgcagctgagaga
aaagaggaaaggatgaaagatttggaggcactccagaaggaggcagatgacttgaggaac
tttattgttgacaaattggaaaaatacaatctgtgctccacttag

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