Garra rufa (doctor fish): 141301509
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Entry
141301509 CDS
T11039
Symbol
psma1
Name
(RefSeq) proteasome subunit alpha type-1 isoform X1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
141301509 (psma1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141301509 (psma1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
grf03051
]
141301509 (psma1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141301509 (psma1)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
141301509 (psma1)
Peptidases and inhibitors [BR:
grf01002
]
Threonine peptidases
Family T1: proteasome family
141301509 (psma1)
Proteasome [BR:
grf03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
141301509 (psma1)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141301509 (psma1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
141301509
NCBI-ProteinID:
XP_073687804
LinkDB
All DBs
Position
25:37278162..37282941
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AA seq
268 aa
AA seq
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MFVCFLQFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQS
ELAAHQKKILHVDNHVGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGS
KTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLER
HMEAFLDCELNDLVQHGLRALRETLPAEQDLTTKNVSVGILGKEMEFTIYDDEDVAKFLE
GLEERPQRRVAQPADEAAPAVPDEPMEH
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttgttttttgcagtttcgtaaccagtatgacaatgatgtgaccgtatggagt
cctcagggccgcattcatcagatcgagtatgccatggaggcggtgaagcagggttcagcc
accgtgggactcaaatcccgcactcacgccgttctggtggccctcaagagagctcagtct
gaactggccgcccatcagaagaagatccttcacgttgacaaccacgtgggcatctccatc
gcaggactgacggcggacgcccgactcctctgcaacttcatgcggcaggagtgtctggac
tccaggtttgtcttcgatagacctcttcctgtgtctagactggtctcgctcattggaagc
aaaactcagattcccacgcagcgctacggcagacggccgtatggagtggggctgctgatc
gcaggatatgacgacatggggccacacatcttccagacgtgcccctcggccaattacttc
gactgtaaggccatgtccatcggcgctcgctcgcagtcggcccgcacctacctggagaga
cacatggaggccttcctggactgtgagctgaatgatctggtgcagcatggtctgcgtgcg
ctgcgggagactcttcctgccgaacaggatctgaccacaaagaacgtgtccgtcgggatt
ttgggaaaggagatggagttcaccatctatgacgacgaagatgtggccaagttcctggag
ggtctggaggagagaccccaaagacgggtggcccagccagcagatgaagcggctccagct
gtacctgatgaacccatggagcactaa
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