Garra rufa (doctor fish): 141301554
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Entry
141301554 CDS
T11039
Symbol
afg3l1
Name
(RefSeq) mitochondrial inner membrane m-AAA protease component AFG3L1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141301554 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141301554 (afg3l1)
Peptidases and inhibitors [BR:
grf01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
141301554 (afg3l1)
Chaperones and folding catalysts [BR:
grf03110
]
Other chaperones and cochaperones
AAA proteases
141301554 (afg3l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
AAA_16
TIP49
RuvB_N
AAA_2
AAA_14
AAA_28
nSTAND3
AAA_17
ThcOx
LonB_AAA-LID
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
141301554
NCBI-ProteinID:
XP_073687853
LinkDB
All DBs
Position
25:34629170..34652323
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AA seq
768 aa
AA seq
DB search
MAGLLSAAAAASVRCGSRALFRFNAGAVGRLAANVNVIHPRFLALNRLKPVSSIGNQYTF
PLLSYSTDAPKDGKASGPEHRPGGGGGGRGRKGGRKDWKSRLLQGDVPWDDKDFRYILIT
LGGVASVLLYLYLRDPGREITWKDFVHRYLDRGLVDRLEVVNKQFVRVILVPGADSSEGS
YVWFNIGSVDTFERNLEAAHYELGLEPSNRAAVVYTTESDGSFLMSFIPTLLLIGFLLFT
LRRGPMGGGMGGGRGGPFSMSESTAKMMKDDIDIKFKDVAGCEEAKVEIMEFVNFLKNPQ
QYQDLGAKIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRD
MFAMARKNAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNTSTNVVVLA
GTNRPDVLDPALMRPGRFDRQIYLGPPDIKGRASIFKVHLQPLKLDPNLDRNTIARKMAA
ATPGFTGADIANVCNEAALIAARHLNKFISVKHFEQAIDRVIGGLEKKTQVLQPTEKKTV
AYHEAGHAVVGWFLQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLFDRMCMMLGG
RVAEQVFFDRITTGAHDDLKKVTQSAYAQIVQFGMSDKVGQVSFDLPRQGEMVLEKPYSE
ATAELIDEEVRDLVDRAFKRTQDLVTEKREQVEMVGRRLLEKEVLDKADMIELLGPRPFE
EKSTYEEFVEGTGSFEEDTSLPEGLKDWNKERGEAQEEPPASKEKQVA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctgctctccgcggctgctgctgcttccgtgcgctgcggatccagagcttta
ttccgcttcaacgctggagctgttgggagactcgccgctaacgttaacgttattcatccg
cggtttttagccttgaaccgccttaaaccagtatcatccatagggaaccagtacacattc
ccgctcttgtcttattccacagacgcacctaaagatggtaaagcaagcggaccagagcat
cggccaggaggaggaggaggaggaagaggaaggaaaggagggaggaaagactggaagagt
cgattattacagggagatgtaccctgggacgataaggatttccgctatattttgatcact
ctgggaggcgttgcgtctgtcctgctgtacctctacctcagagatccaggccgggaaatt
acctggaaggattttgtccatcggtacctggacagaggactggttgaccgtttagaggtg
gtgaataaacagtttgttagggtcatcctggtacctggggctgacagctctgaaggaagt
tacgtgtggtttaacatcggcagcgtggacacgttcgagaggaatctagaagctgctcac
tatgagctgggtttggagccgtccaatagagctgcagtggtctacaccacagagagtgat
gggtcttttctgatgagtttcattcccaccctgcttttgattggcttcttgcttttcact
ctgcgccgtgggccaatgggaggagggatgggcggaggaaggggcgggcccttcagcatg
agcgaatcaaccgccaagatgatgaaggacgatattgacatcaagttcaaggatgtggct
ggatgcgaagaagccaaggtggagatcatggagtttgtcaatttcctcaagaacccacaa
caataccaggatctgggtgctaagattcctaagggtgctgtgctgtcaggtcctccagga
acaggtaaaacgctgctcgctaaagctactgctggagaggctaacgttcctttcattaca
gtcaacggttcagagtttctggagatgttcgttggagttggtccggccagagtgagagac
atgtttgctatggcgaggaagaacgccccgtgcatcctcttcattgatgagattgatgct
gtggggaggaaaaggggtgggggaaattttggtggccagagtgaacaggaaaacacactc
aatcagctattggtggaaatggatggatttaatacaagtacaaatgttgtagttctggct
ggtacaaacagaccggatgtccttgaccctgcactgatgcgaccagggaggttcgacaga
cagatttatttgggaccacctgacattaagggtcgagcatccatattcaaagtgcatctg
cagcccctcaaactggaccccaatctggaccggaataccattgcaaggaagatggcagct
gctacgcctggattcactggtgctgatattgcaaatgtctgtaatgaagcagcactcatt
gctgctaggcatctaaataaattcatcagtgttaagcactttgagcaggccatcgacaga
gtcatcggaggtctggagaagaagactcaggttttacaacccactgagaaaaagactgta
gcctatcatgaagcaggacatgctgtggtgggctggtttctccaacatgctgacccattg
ctcaaggtttccataattccaagagggaaaggcctgggctatgcacagtaccttccaaaa
gagcagtatttatatacacgggagcagcttttcgacaggatgtgtatgatgcttggcggg
cgcgtggccgagcaggtgttttttgacaggatcacgactggggctcatgacgaccttaag
aaggtcacacagtcggcgtatgctcagattgtacagtttggcatgagcgacaaagtgggc
caggtgtcatttgacctgccccgccagggtgagatggttctggagaagccctacagtgag
gctacagcagaactcattgacgaggaggtcagagatctggtcgaccgcgcctttaagaga
acacaggatctggtcactgagaaacgagagcaggtggaaatggttggtaggcgtttgctg
gaaaaagaagttctagacaaagctgatatgatagagttgctggggcccaggccatttgag
gagaagtccacatatgaggagtttgtcgagggcactggaagctttgaggaagatacaagt
cttccagaagggttgaaggactggaacaaagagagaggagaagcccaggaagaacctcca
gcttcaaaagaaaaacaggttgcttga
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