Garra rufa (doctor fish): 141301578
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Entry
141301578 CDS
T11039
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04620
Toll-like receptor signaling pathway
grf04621
NOD-like receptor signaling pathway
grf04622
RIG-I-like receptor signaling pathway
grf04623
Cytosolic DNA-sensing pathway
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
141301578 (irf7)
04621 NOD-like receptor signaling pathway
141301578 (irf7)
04622 RIG-I-like receptor signaling pathway
141301578 (irf7)
04623 Cytosolic DNA-sensing pathway
141301578 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141301578 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141301578 (irf7)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
141301578 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
141301578
NCBI-ProteinID:
XP_073687877
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All DBs
Position
25:complement(33469410..33480259)
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AA seq
426 aa
AA seq
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MAAMQGSAICKPQFGPWLIEQVESGKYEGLRMIDNDKFRIPWKHNSRRDLGDDDVKIFKE
WAVVSGKISEHPNDKAKWKTNFRCALHCLKTFQMLEDHSKDPDDQHKVYRIIRPQNHQET
PSVEPAQLAIPFIPEVYTGSNYLSDEMEQELLNQVERMELNHPQTESGWDTCSQQIIPTT
SCNYYETPYSDGPSMQNNTPVPDQQPYTTVQQWNLPFPWDLEISISYRRTEVLKTRLCTQ
LIQFHYQCDPTQLRGHPISFPSTENLIDQRQILFTKRILDSIQRGLLLEVNQYGIYGFRQ
DKCKVFVSTSNPSEIQNPEPRKLHQNTRELLFSFDKYIKDLMDFKENRRGSPDYTIYLCF
GEKLADGKPLEKKLITVKIVPLICRELHERAQMEGASSLSNESISLQFSHNSLFDLISSL
GLPTVA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgcaaggaagtgcaatttgcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatacgagggattgcgcatgatagacaatgacaaatttcggatc
ccctggaaacacaactcgcgaagggaccttggggacgacgatgtgaaaatatttaaggaa
tgggctgtggtcagcgggaagatcagcgagcaccctaatgacaaagcgaaatggaagacg
aatttccgttgtgcgcttcattgtctaaaaacctttcagatgctagaggatcactccaaa
gatccagacgaccagcacaaagtctatcgtatcatccgtcctcaaaatcaccaagagaca
ccgagtgtagagccagctcagcttgcaattccattcattcctgaggtctacactggatct
aattacctgtctgatgaaatggagcaggagttgctcaaccaggtggagagaatggagcta
aatcatccacaaacagaatccggatgggacacctgttcccaacaaatcattccgaccact
tcatgcaactactatgagactccctactcagatggcccaagcatgcagaataacacacct
gtcccagaccagcaaccctacactacagtgcagcaatggaaccttccatttccctgggac
ctggagatctccatcagctacagaagaacagaagttttgaaaacgcgcctgtgtacgcaa
ctcattcagtttcactaccagtgcgacccaactcagctgagaggacaccccatcagcttc
ccgtccaccgagaatctgattgatcaaaggcagatcctcttcactaaacgcatcctagac
agcattcagagaggtctgctgctggaggtaaaccagtatggcatctatggcttccgacag
gacaagtgtaaagtgtttgtcagcaccagcaacccgtctgagatccagaacccagagccc
agaaagctgcatcagaacaccagagagctactgttcagctttgataagtacataaaagat
ctgatggattttaaagaaaacagacgaggttctccagattacaccatctacctgtgcttc
ggagagaagctcgcggatggaaaaccactggagaagaaactgattactgtcaaaattgta
cctctgatatgccgtgaacttcatgagagagctcaaatggagggagcctcctctcttagc
aatgaaagcattagcttgcagttctcccacaacagcctttttgaccttataagttctttg
ggtctgcctacagtggcctaa
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