Garra rufa (doctor fish): 141301580
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Entry
141301580 CDS
T11039
Symbol
clpxb
Name
(RefSeq) ATP-dependent clpX-like chaperone, mitochondrial
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141301580 (clpxb)
Chaperones and folding catalysts [BR:
grf03110
]
Heat shock proteins
HSP100
141301580 (clpxb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_22
AAA_14
AAA_7
Sigma54_activat
IstB_IS21
AAA_16
NACHT
Sigma54_activ_2
RuvB_N
AAA_28
nSTAND3
ABC_tran
DEAD
TsaE
AAA_18
ResIII
T2SSE
PduV-EutP
DUF5795
Motif
Other DBs
NCBI-GeneID:
141301580
NCBI-ProteinID:
XP_073687879
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Position
25:36535602..36564991
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AA seq
623 aa
AA seq
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MSCSCGPAVRVIIKSVHKGFPRSRVQLFSHTRAVCDEVHLPPFVYVRSFSQTAVCFASKD
STTRDGDGGKKGVSEAGGKRASGAGGSGKGGSQLRCPKCGDPCTHVETFVSSTRFVKCEK
CHHFFVVLSEADSKKGLNKEAESSEHVKFALAQKPPPPPKKIYAYLDKYVVGQSYAKKVL
AVAVYNHYKRIFNNLPAAGRQQAETEKQSSLSPRELEIRRREDEYRFTKLLQIAGISPHG
NALGASVQQQTNQQAPQDKRGRDVLESTHTDIKLEKSNIVLLGPTGSGKTLLAQTLAKCL
DVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYSVDKAQQGIVFLDEVDKIGSVPGIH
QLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVASGAFNGLDRII
SRRKNEKYLGFGTPSNLGKGRRAAAAADLANTSGNEMDAIAEIEEKDRLLRHVEARDLIE
FGMIPEFVGRLPVVVPLHSLDEEMLVQILTEPRNAVVPQYQALFSMDKCELNVTPDALRA
IARFALERKTGARGLRSIMEKLLLEPMFEVPQSDIIAVELSKEVVQGKCGPRYIRAPPKE
TEEEFDSAAEEDNWPRHADAANN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctcatgtggacctgcagtgagggtgatcataaagtctgttcataaaggtttt
cctcgttcacgtgttcaactcttcagccacactagagcagtgtgtgacgaagttcatctt
cctccgtttgtgtacgtgagatcgttttctcaaacagcggtgtgtttcgcctctaaagac
agtacgaccagagacggtgatggcggaaagaagggtgtaagtgaggcgggtggaaagcgg
gcgtcaggtgctggaggttcagggaaaggtggcagtcagctgagatgtccgaaatgtgga
gatccttgtacacacgtggagacttttgtgtcctccacacggtttgtgaaatgtgaaaag
tgccatcatttcttcgtagttctgtctgaggctgactccaagaagggtttgaataaggaa
gcggagagctctgagcatgttaaatttgcattagctcagaaaccccctccacctcctaaa
aagatttatgcctacctcgacaaatatgttgttggccagtcgtacgccaagaaagtgttg
gcagttgccgtctataatcattacaaacggatcttcaacaacctcccggcagcaggccga
cagcaagcggaaacagagaaacagagttccctctctcccagagagttagagatcagaaga
cgtgaagatgaatacaggtttacaaagctgcttcagatcgctggcatcagtccccatggc
aatgctctgggtgcgtctgttcagcagcagaccaatcagcaagctcctcaagacaaaagg
ggcagagacgtgcttgaatccactcacactgatattaagctggaaaagagcaacattgtg
ttgctgggacctactggatcaggtaaaactctgctggcccagactctggctaaatgcttg
gatgtgcccttcgccatctgcgattgtaccaccctgacgcaggcgggatatgtaggcgag
gacattgaatctgtgattgccaaacttctgcaggatgccaactattcagttgataaagcc
cagcaaggcatagtgttcctggatgaggtggataagattggcagtgtgcctggaattcat
cagctgagagatgttggaggtgaaggagttcagcagggtttgctgaaattgcttgaggga
acaatcgttaatgttccagagaagaacagcaggaagttgagaggagaaactgtgcaggtg
gatacaaccaacattttgtttgtggcatcaggtgctttcaacgggctggaccgaatcatt
agtcgtcggaaaaatgaaaagtatcttggttttgggacaccttctaacctgggtaaaggg
cgtcgagcggcagcagctgcagatctggccaacacctcagggaatgaaatggacgcaatt
gctgagattgaggaaaaggaccggctcctgcggcacgttgaagcacgggacctcatcgag
ttcggcatgatcccagagtttgtgggccgcctgcctgtggtggtgccactgcacagtctt
gacgaagagatgctggtgcagattcttacagagcctcgcaatgcagtggtccctcaatat
caggccctcttcagtatggataaatgtgagctgaatgtaaccccagatgcattaagggca
atcgcccgttttgcactggaacggaagacaggagccaggggtcttcgctccatcatggag
aagctcttgctggagcccatgtttgaggtgcctcagtctgacatcattgctgtggaactg
tctaaggaggtggtccagggcaagtgtggaccacgctacattagagctcctcccaaagaa
acagaggaagagtttgactctgccgctgaggaagacaactggcccagacacgctgacgcc
gccaacaactga
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