Garra rufa (doctor fish): 141301623
Help
Entry
141301623 CDS
T11039
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141301623 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141301623 (lrrc4ca)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
NGL family
141301623 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
141301623
NCBI-ProteinID:
XP_073687921
LinkDB
All DBs
Position
25:complement(12714663..12748455)
Genome browser
AA seq
647 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDEGHPTVQQKSGPT
PSSGIWETLPPSFTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMEGHLALPPL
EHEHLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattatttgtgctgtcgctggccctgcagcttctagtggtggct
ggcctggtgcgagcgcagacctgcccctccgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tatctgaaccttcaggagaacctcatccaggtgatcaaagttgacagcttcaagcatcta
aggcacctggagatcctgcagctcagcaagaaccacatccgcaacattgaaatcggagct
ttcaatgggctggctaacctcaacactctggagctcttcgataatcgtctaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaagagctttggttgaggaataaccct
atcgagagtataccctcgtatgccttcaaccgcgtaccatcgctgcgaaggctggacttg
ggcgagctgaaaaggctctcgtatatttcagaaggtgccttcgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttgaaggagatccccaacctcattcctcttgtc
cgtttggatgagttggagatgtcaggaaaccagttgtctataattaggccagggtctttc
aaaggcctcgtccacttacagaaactgtggatgatgcatgcgcagatccagacgattgag
agaaatgcctttgatgatcttcagtcccttgtggagcttaatttggcccataataacctt
accctcctgccccatgacctcttcaccccactacaccacttggagagagtacacttgcac
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtgccggccaataccagttgctgtgcccgctgtgcatcacctaccagccacaaagggcgc
tatatcggcgaacttgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcagacctgaacgtgactgagggcatggcagcagaacttaaatgtcgagcgaattct
ttgacctcagtcagctggatcacgccaaatgggtccataatgacacacggagcatacaag
atacgcatttccgtgcttaacgatgggacgttaaactttaccaatgtcacaatgcaggac
acgggaacgtacacttgtatggtgagcaactccgcaggcaacacaacagcctcggctacg
ctcaacgtgtcttcgacagagaacagcagcttcagttacttcactacagttaccgtcgag
accacagaagcggcacatgatgagggccacccaacggtacagcagaagagtggcccaact
ccttcttctggaatttgggagaccttaccaccttccttcaccactactaccacaacagca
cggacaccactgtccaccaaggccaccgacaagacctacaccatccctgtcaccgccctg
attgacggctccctcaacaccttggatgaggtcatgaagaccacgaagatcatcattggt
tgctttgttgccatcaccctgatggcggccgtcatgctgatcatattttataaaatgcgc
aaacagcatcaccagcagaaccaccacgcaccgacgcgaaccatcgagatcatcaacgtg
gatgaggattgtgtaacaggtggacctaccatggagggccacctcgcccttccgccactg
gagcatgagcacctgaatcattacaacgcctacaagactgcgtacaaccatgcctccacc
atcaattctatacacagctctgcccacgaacctttgctaattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
DBGET
integrated database retrieval system
