Garra rufa (doctor fish): 141301651
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Entry
141301651 CDS
T11039
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
grf04810
Regulation of actin cytoskeleton
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141301651
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141301651
09142 Cell motility
04820 Cytoskeleton in muscle cells
141301651
04810 Regulation of actin cytoskeleton
141301651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141301651
Cell adhesion molecules [BR:
grf04515
]
Integrins
Integrin alpha subunits
141301651
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_2
FG-GAP_3
EIF3I
Motif
Other DBs
NCBI-GeneID:
141301651
NCBI-ProteinID:
XP_073687948
LinkDB
All DBs
Position
25:complement(4828746..4897633)
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AA seq
959 aa
AA seq
DB search
MEYTYILLLWIAALMPGRWTCFNIDTRHAKIIKGSKEAQFGYTVQQHEADGQKWLLVGAP
FETSGEHQTGDVYRCPLDSKRATNCTRLHLGKISLNNVIERKDKMRLGMTLTSNPKDNSF
VACGPLWSYECGSSYYSTGICSRVNSSFDFTHSIAPAYQRCETYMDIVIVLDGSNSIYPW
YEVQDFLINVLQKFYIGPGQIQVGVVQYGERVVNEFRLDDFRTVEEVVAAAKNIDQRGGE
ETRTALAISEARSQAFKHGARPDAKKVMIVITDGESHDSPDLRKAVEESEKDNITLYGIA
VLGYYNRRGINPEAFLREIKFIATDPEEHFFSVTDESALKDIVDALGEKIFSLEGTNQNG
TAFGLQMSQAGFSSHIVEDGILVGAVGAYDWNGAVLKETRHGKVIPPKSSYVKEFPEELK
NHGAYLGYMVSSVVSAQHGQLYIAGAPRFNHTGKVVIFTLTNSGNLTILYSLYGQQIGSY
YGSELAPIDLDGDGLTDLLLVGAPMYFYKGWEKGRVYIYTISLQGSFIPDGTLGPSEKTH
DSRFGAAMSTLPDLNGDGFSELVVGAPLEDNHKGAIYLFYGQQNNIQPKYKQRIAAGDIS
PGLRYFGRSVHGMMDVNGDELIDLSVGSLGAAVLLWSRSVVRVGISVHFEPSKINVFNKD
CSRGGREVSCMLATVCLNVTARTPMTDPKTVALRYSFGFEENGYFPRAVLDSTEDPQPRD
VTFRPNSDYCQKVYFHVHEVTDYTRPLIFTVDVGLQNTDEGPVLDDGWPTSLQSELPFWN
GCDNDDQCIPNLILQSSSDLLDRRQFCGRRERSSWPPCVHQRMRTSGERLVEASRRKVLV
EARLENRGENAYGTILHITHSPNLQFSSLVVKAPSDIAIECLSSDDTSLYRTCNVSAPFM
KSFAQVYFRLEFEFSRSVFLNYVQITLRVSSEGEEMSLEDNINDIYHNLKYEADILFTR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggagtacacttacatcctgctgctgtggatcgccgctctgatgccagggcggtggacc
tgctttaatatcgacaccagacatgcaaaaatcatcaagggttcgaaggaggctcagttt
ggatatacggttcaacaacacgaggcggatgggcagaaatggctcctggtcggagctccc
tttgagaccagcggtgaacaccagacaggagacgtctacagatgtccactagacagcaaa
cgtgctacgaactgcacaagactgcatttagggaaaatatccttgaacaacgtgattgaa
cgcaaagacaaaatgaggctgggaatgactctcacctccaacccgaaagacaacagcttt
gtggcgtgtgggccgctgtggtcgtatgagtgtggaagttcctactacagcaccggcatc
tgttcaagagtcaacagcagctttgacttcacccacagcatcgctccagcctatcaaaga
tgcgagacctacatggacatagtaattgtgttagatggatccaactccatctacccctgg
tatgaggttcaagatttcctgataaatgtgctacagaagttttacatcggtccaggacag
atccaggttggggtggtccagtacggtgagagagtggtgaacgagtttcggctggatgat
ttccgcacggttgaggaggttgtagcagctgcgaagaatatcgaccagcgaggcggagag
gaaacacgcacagctctcgcgatcagtgaagctcgaagtcaagcattcaaacacggagct
cgtccagacgccaagaaagttatgattgtcatcaccgatggagaatcgcacgacagccca
gacctacggaaagccgtggaggaaagcgagaaggataatattacgttgtacggtattgcg
gttcttggctactacaacaggcgagggatcaatcctgaagcttttctgagggaaatcaag
ttcatcgccactgatcctgaggagcacttcttcagcgtcactgatgagtctgccctgaag
gatattgttgatgctctgggagagaagatcttcagcttggagggcaccaaccaaaatggt
acggcctttggtttgcagatgtctcaagctggattctcgtcacatatcgtagaggacggg
attctggttggtgccgttggggcgtacgactggaacggagctgttctgaaggagacccgc
catggtaaagtcatcccacccaagtcttcatatgtgaaagagttcccagaggagctgaag
aaccacggagcgtacttggggtacatggtgtcatcggtggtctcggctcaacatggtcag
ctatacatcgctggagctcctcgattcaaccacacggggaaagtcgtcatcttcacgctg
accaacagcggcaatctcaccatactgtactcactgtacggacagcagatcggatcgtat
tatggaagtgagctggcaccgattgatctggatggcgatggattgacagatcttttactg
gtcggagctcccatgtacttctacaaaggctgggagaaaggccgagtttacatctacacc
atcagcttacagggctcttttataccagacgggactcttgggccatcagaaaagactcat
gattcccggtttggcgctgctatgtccacccttccggacttgaatggtgacggcttcagt
gagctggttgtgggcgcaccactggaggacaatcataaaggagccatctatctcttctac
ggccaacaaaacaacatccaacccaaatacaaacagagaatagccgctggtgacatctct
ccaggtctccgttatttcggccgcagtgttcatgggatgatggatgtgaatggagatgag
ctcatagatctgtccgtggggtctctaggggccgcggttctgctttggtctcgcagtgtc
gtccgtgtggggatcagcgttcattttgagccttcaaaaatcaacgtttttaataaagac
tgcagtcgaggaggtcgagaggtgtcgtgtatgttggccacggtttgcctgaacgtgacg
gcgcggacacccatgacggatccaaaaacagtcgcgctgaggtacagctttggttttgag
gagaacggttatttccccagagccgtgttagacagcaccgaagacccacagccaagagac
gtcacctttcgaccaaactcagattactgccagaaagtgtatttccacgttcatgaagtg
acagactacacaagacccctgatcttcactgttgacgtcggcctgcagaacacagatgaa
gggccggttctggatgacgggtggcccaccagcctgcagtcagagcttccgttctggaac
ggttgtgataatgacgatcagtgcattcccaacctcatcctgcagagcagctctgaccta
ttagatcgcaggcagttctgtgggcgtcgcgagcgctcctcgtggccgccgtgtgtccat
cagaggatgaggacgagcggggagcgtttagtggaggccagccggaggaaagttctggtg
gaggcgcgtttggagaaccgaggagagaacgcatacggcacgatcctgcacatcacgcat
tctccaaacctccagttctccagtctggtggtgaaggcaccctcagatattgcaatcgag
tgtctgagctccgacgatacgagtctctaccgaacctgcaacgtcagtgcgccgttcatg
aagtcattcgctcaggtgtattttcgactggagtttgagttcagcagatctgtcttcttg
aactatgtccagatcaccttgagagtctccagtgaaggtgaagaaatgtctctggaggac
aacatcaatgacatatatcataatctgaaatatgaggctgatattctcttcacaaggtaa
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