Garra rufa (doctor fish): 141301694
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Entry
141301694 CDS
T11039
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141301694 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141301694 (lamb1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
EGF_Teneurin
F5_F8_type_C
Alanine_zipper
DUF7652
Motif
Other DBs
NCBI-GeneID:
141301694
NCBI-ProteinID:
XP_073687985
LinkDB
All DBs
Position
25:28504988..28551025
Genome browser
AA seq
1785 aa
AA seq
DB search
MLLQLAALSILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGVQKPEPF
CIVSHLQEEKKCFVCDSSETYDESMHQVTSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMLIERSADFGKTWQVYRYFAYDCESSFPYVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPAFKIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGVGEAVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDTCHFDMALYRASGNVSGGVCD
DCRHNTMGHKCEQCKPFFYQHPEKDIRDPNICEPCNCDPVGSLNGGVCDALTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNGLGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PHSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
LLSRPVCFEEGLNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LETNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSIHSFCHEATGQCECIP
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDTLTGQCLSCRDHTNGHNCERCLSGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKGHDSSQVFCVCNQGYKGARCEECAPGYYG
NPHEVGGECRPCQCSNNIDMMDPESCDARTGACLKCLYHTEGEDCNRCKLGYYGNALTQS
CRKCVCNHMGTAEDTCPSPGNCNCDLNSGQCQCLPNVVGQHCDKCAPDTWNIASGKGCEA
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKVTGHCVCMEGVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQTTINNVESSANSIRNILAQNPATQPLTEIQGLLEQATALMAEMNTN
LNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKDLQEQVDFVKNSDIRGARASVNR
YYEQSQMAEIRANASTVDPYNLVNQSATLRTETEDLMNQTKEEFIQRQDDYSKKLDNLAG
QLETLDLSELSEKTCGSPAGSENCADSPCGGLSCLDGEGNRKCGGEGCDGLTTLAHNAWQ
KSKDFDFEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKKRVDGSNEELRQ
LIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILN
QSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQHAERAQSTVTEALKQASADIKG
TQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANITEKEAESINAL
AEQLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacagctcgcagccctttcaattttaggggcatgggctctcgcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcccgccacaggagatcttctcatt
ggacgagcgcaccaactttcggccacttccacatgcggtgtccagaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtttgcgattcctcggaaacc
tacgatgagagcatgcaccaagtaaccagccatagaattgaaaatgtcgtgactacattt
gccccaaaccgccttaagacttggtggcagtcggaaaacggcctggagaacgtcacaatc
cagttgaaccttgaggcagagttccactttacccatctcatcatgacttttaaaacattc
agacctgctgcaatgttaatcgaacgttctgcggacttcgggaagacttggcaagtgtat
cgttacttcgcctacgactgcgagtcctccttcccctacgtttctcaaggacccatgacc
aaagtggacgatgttatctgtgattctcgctactccgacatcgagccttcaactgagggc
gaggccatcttcagggttttggatccagctttcaagattgatgatccctacagccccaga
atccaaaacatgttgaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggagacaatcttctggactcgcgtatagagatcaaggagaagtactactatgcagtctac
gatatggtggtcagaggaaactgtttttgctatggtcacgcatctgaatgcgcccccgtc
gatggagttggagaagctgtggatggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgagcgctgtcaggacttttaccatgacctgccctggaggcca
gcagagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgatacc
tgtcatttcgacatggccttgtaccgggcctcgggtaacgtgagtggcggcgtgtgcgac
gactgcaggcacaacaccatgggtcacaagtgtgagcagtgcaagccgttcttctaccaa
catccggagaaagacatccgcgaccctaacatctgcgagccatgtaactgtgatccagtt
ggctctctgaatggcggagtttgtgatgcgctgacagacgtgtctcttgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggcgaacgctgtgaccagtgcaaacagggt
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaatggtttggga
acggttccaggaggaagtccatgtgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaacaacaattgctctcct
gaaacgggtcagtgtcagtgtcgtgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttacgaagcagaggatgccaagttt
ggacctggtgtgacggttgtcccaagaccccagcctcaggacagatcccctacgtggaca
ggcattggttttgtgaacgttcctgaaggtgcctaccttgagttcagcattgacaacatc
ccccactctatggagtatgacattatcatccgatatgaacctcagctgccagagcagtgg
gaagaagtgttgatgactgtcatcaggcctcgtgtcattaccgccgacagccgctgtgca
aacacaatgcccgacgatgacaaccaggtggtgtctttgcatcccggatccaggtatgtg
ctgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgcttgagtctg
tctcgctactcggctctcagcgatgtgcagtctccgtacacgctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctggatcagagggtggagac
ttggagaccaacagcgcctgggaaaccttccagcgctaccgctgtttggaaaacagccaa
gcggtggtgaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcagct
cttctgcaccagggagttaaagcttgtcagtgcgacccgcagggctctctcagcacagtt
tgtgacccgagcggtggccagtgccagtgtcgccccaacgtggttggcagaaactgcgac
aaatgcgccccagcgaccttcctttttggcccgcaaggctgcaggccatgtgattgcagt
cctgaggggtccatccactccttctgccacgaggccaccggtcagtgtgagtgtattccc
ggagcatatgggcgccagtgcgaccgctgtctgcctggatactggggtttccctaactgt
cgcccttgcacttgcaatggccacgccgagcagtgcgacacactcacgggacagtgtctg
tcctgcagggaccacaccaatggacacaactgcgagaggtgtttgagcggctactatggt
gaccctgtccttggctctggagatcattgccgcccttgcatgtgtccggatggtcctggc
agtggcagacagttctccggcgcgtgttataagggccacgactccagccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccacacgaggtgggaggagaatgccggccctgtcagtgcagcaacaacattgacatg
atggacccggagtcctgcgacgcccgtacgggtgcctgtctcaaatgcctgtaccacaca
gagggcgaggactgcaaccgctgcaagctgggttattacggcaatgcactgacccagagc
tgcagaaagtgtgtgtgtaatcatatgggcactgctgaggacacgtgcccctctccgggt
aactgcaactgtgacttgaacagcgggcagtgccagtgtcttcctaatgtggtgggacag
cactgcgataagtgtgcgccggacacgtggaatatagccagcgggaaaggctgcgaggcc
tgcgactgcgaccttaaccattccttcagctcatcatgcaatgagattatgggccagtgt
tcttgtaaacctgggtttggtggcagaacctgccgagagtgtagagagctgttctggggg
aatcctgaggtcaaatgccacgcatgtgattgtgacccacgaggcatcgcggagcagcag
tgcaacaaggtcacaggtcactgtgtttgcatggagggcgtttccgggccccgatgtgac
acgtgcgctcgaggatacactggcgagttcccacattgcgagcgctgccaccagtgcttt
gccgaatgggatgtaatcgtgggcgacctcaccaaccagacccacagactggttcagaag
gtcaataccatcaaagccaccggcattacaggaccctaccagaccaccatcaataacgtt
gaaagcagcgccaactcaatccgcaacatcctggcccagaatccagccactcagcctcta
acggagatccagggacttctcgaacaagctactgccttgatggctgaaatgaacaccaac
cttaatctgacggaggaaaccttgtcagagatctcatccgacaacaacagcacggacacc
aaactgaactccctcaaagaagaagcccagaaactggaacagacggtgaaagatctgcag
gaacaagtggattttgtgaagaattcagacattcgaggagctagagccagcgtgaatcga
tactacgagcagtcccagatggcggagattcgtgcgaatgcttccactgttgacccttat
aacctggttaatcagtctgccaccctccggacagaaacagaggacttgatgaaccagact
aaagaagagttcattcaaaggcaggatgactattcgaagaaactggacaacctcgctgga
cagctggagactctggacctgtctgagcttagtgagaagacatgtggcagtccagctggc
tcagagaactgtgccgactccccgtgcggaggcctgagctgtctggatggggaaggaaac
aggaagtgtggaggagagggatgtgatggcctcaccacgctggcccacaatgcctggcag
aaatccaaggactttgactttgagattatcagcgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaggtaaaagcagatgaagctaaacttaacgctcaagaagtg
cttgcaaaaaccaatgagactaaaaaacgtgtggacggcagcaacgaggagctacgtcaa
ctcatcaaacagatcagagacttcctcactcaggatggagcggacctggaaagcattgag
gctgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctccagaac
ctcaccgcggagatcagggagcgcgtgggcagcttgacagacgtcgaggacatcctcaac
cagagtgccgctgacatcctcagagcagaaagccttctggaacaagcccgcaaggccagg
aaggaggcgacagatgtaaaagacacagctgagatggtgaaggaggccttgcagcatgct
gagcgtgcccagagtacagtaaccgaggcactgaaacaggcaagcgctgacatcaaggga
acacaagacttgttggtttcggtggagtccgagacctcagactcggagctaaaactgagt
aacgccacccgaaggctcctgaagttagaaagcgatgtagctctgctgaaagaaaaagct
ctcaatacctccaccagcgccaacatcacagagaaagaggctgagagcatcaacgcgctg
gctgagcagctcaaaaaggatctggattcagagctgaaagacaagtacagtagtgttgag
gagctgatcacacagaaggctgaaggagtggccgaggccaagaaaagagcggagaaactc
caacaggaggccaaaaatctgctgctacaagccagcgacaaacttcagcttttgaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaagccaatgagctggtg
gatctggagaaggctgtgaaagaactgcttcaggagatcagtcacaaagtcaccgtttac
agcacctgtctgttttaa
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integrated database retrieval system