KEGG   Garra rufa (doctor fish): 141301694
Entry
141301694         CDS       T11039                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141301694 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141301694 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like EGF_Teneurin F5_F8_type_C Alanine_zipper DUF7652
Other DBs
NCBI-GeneID: 141301694
NCBI-ProteinID: XP_073687985
LinkDB
Position
25:28504988..28551025
AA seq 1785 aa
MLLQLAALSILGAWALADVPELGDVCTEGSCYPATGDLLIGRAHQLSATSTCGVQKPEPF
CIVSHLQEEKKCFVCDSSETYDESMHQVTSHRIENVVTTFAPNRLKTWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMLIERSADFGKTWQVYRYFAYDCESSFPYVSQGPMT
KVDDVICDSRYSDIEPSTEGEAIFRVLDPAFKIDDPYSPRIQNMLKITNLRVKFTKLHTL
GDNLLDSRIEIKEKYYYAVYDMVVRGNCFCYGHASECAPVDGVGEAVDGMVHGHCMCNHN
TMGLNCERCQDFYHDLPWRPAEGRNTNACKKCNCNHHSDTCHFDMALYRASGNVSGGVCD
DCRHNTMGHKCEQCKPFFYQHPEKDIRDPNICEPCNCDPVGSLNGGVCDALTDVSLGLIA
GQCRCKPNVEGERCDQCKQGHYGLSDDPLGCQPCTCNGLGTVPGGSPCDTDSGNCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDHGGAINNNCSPETGQCQCREHMFGRRCDQVE
SGFYFIALDHYTYEAEDAKFGPGVTVVPRPQPQDRSPTWTGIGFVNVPEGAYLEFSIDNI
PHSMEYDIIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQVVSLHPGSRYV
LLSRPVCFEEGLNYTVRLSLSRYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGSEGGD
LETNSAWETFQRYRCLENSQAVVKTPMTDICRNYIFSVSALLHQGVKACQCDPQGSLSTV
CDPSGGQCQCRPNVVGRNCDKCAPATFLFGPQGCRPCDCSPEGSIHSFCHEATGQCECIP
GAYGRQCDRCLPGYWGFPNCRPCTCNGHAEQCDTLTGQCLSCRDHTNGHNCERCLSGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFSGACYKGHDSSQVFCVCNQGYKGARCEECAPGYYG
NPHEVGGECRPCQCSNNIDMMDPESCDARTGACLKCLYHTEGEDCNRCKLGYYGNALTQS
CRKCVCNHMGTAEDTCPSPGNCNCDLNSGQCQCLPNVVGQHCDKCAPDTWNIASGKGCEA
CDCDLNHSFSSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQ
CNKVTGHCVCMEGVSGPRCDTCARGYTGEFPHCERCHQCFAEWDVIVGDLTNQTHRLVQK
VNTIKATGITGPYQTTINNVESSANSIRNILAQNPATQPLTEIQGLLEQATALMAEMNTN
LNLTEETLSEISSDNNSTDTKLNSLKEEAQKLEQTVKDLQEQVDFVKNSDIRGARASVNR
YYEQSQMAEIRANASTVDPYNLVNQSATLRTETEDLMNQTKEEFIQRQDDYSKKLDNLAG
QLETLDLSELSEKTCGSPAGSENCADSPCGGLSCLDGEGNRKCGGEGCDGLTTLAHNAWQ
KSKDFDFEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTNETKKRVDGSNEELRQ
LIKQIRDFLTQDGADLESIEAVANEVLQMQMPTTPAQLQNLTAEIRERVGSLTDVEDILN
QSAADILRAESLLEQARKARKEATDVKDTAEMVKEALQHAERAQSTVTEALKQASADIKG
TQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNTSTSANITEKEAESINAL
AEQLKKDLDSELKDKYSSVEELITQKAEGVAEAKKRAEKLQQEAKNLLLQASDKLQLLKN
LEKSYDENQKLLEDKANELVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgctgttacagctcgcagccctttcaattttaggggcatgggctctcgcagatgtgcct
gagctgggagatgtttgcacagaggggagctgttatcccgccacaggagatcttctcatt
ggacgagcgcaccaactttcggccacttccacatgcggtgtccagaaacctgagcctttt
tgtatcgtcagtcatttgcaggaagagaagaagtgctttgtttgcgattcctcggaaacc
tacgatgagagcatgcaccaagtaaccagccatagaattgaaaatgtcgtgactacattt
gccccaaaccgccttaagacttggtggcagtcggaaaacggcctggagaacgtcacaatc
cagttgaaccttgaggcagagttccactttacccatctcatcatgacttttaaaacattc
agacctgctgcaatgttaatcgaacgttctgcggacttcgggaagacttggcaagtgtat
cgttacttcgcctacgactgcgagtcctccttcccctacgtttctcaaggacccatgacc
aaagtggacgatgttatctgtgattctcgctactccgacatcgagccttcaactgagggc
gaggccatcttcagggttttggatccagctttcaagattgatgatccctacagccccaga
atccaaaacatgttgaagatcactaatctgagggtgaagttcactaagctgcacactctc
ggagacaatcttctggactcgcgtatagagatcaaggagaagtactactatgcagtctac
gatatggtggtcagaggaaactgtttttgctatggtcacgcatctgaatgcgcccccgtc
gatggagttggagaagctgtggatggcatggtccatggccattgtatgtgtaatcataac
accatgggtctgaactgtgagcgctgtcaggacttttaccatgacctgccctggaggcca
gcagagggacgcaacaccaacgcctgtaaaaagtgtaactgcaatcatcactctgatacc
tgtcatttcgacatggccttgtaccgggcctcgggtaacgtgagtggcggcgtgtgcgac
gactgcaggcacaacaccatgggtcacaagtgtgagcagtgcaagccgttcttctaccaa
catccggagaaagacatccgcgaccctaacatctgcgagccatgtaactgtgatccagtt
ggctctctgaatggcggagtttgtgatgcgctgacagacgtgtctcttgggctgatcgcg
ggtcagtgtcgctgtaagcctaatgtggagggcgaacgctgtgaccagtgcaaacagggt
cattacggactcagcgacgaccctctgggatgccagccatgcacatgcaatggtttggga
acggttccaggaggaagtccatgtgatacagactcaggaaactgctactgtaaacgtctg
gttaccggaaggaactgtgaccagtgtctgcctcagcactggggtctcagtaacgacatg
gatggctgcagaccatgtgactgtgatcatggtggtgcaatcaacaacaattgctctcct
gaaacgggtcagtgtcagtgtcgtgagcacatgtttggcagacgctgcgaccaggtggaa
tctggtttttacttcatcgctctggaccactacacttacgaagcagaggatgccaagttt
ggacctggtgtgacggttgtcccaagaccccagcctcaggacagatcccctacgtggaca
ggcattggttttgtgaacgttcctgaaggtgcctaccttgagttcagcattgacaacatc
ccccactctatggagtatgacattatcatccgatatgaacctcagctgccagagcagtgg
gaagaagtgttgatgactgtcatcaggcctcgtgtcattaccgccgacagccgctgtgca
aacacaatgcccgacgatgacaaccaggtggtgtctttgcatcccggatccaggtatgtg
ctgctgtctaggcctgtgtgttttgaagaaggcttgaactacaccgtgcgcttgagtctg
tctcgctactcggctctcagcgatgtgcagtctccgtacacgctcatcgactcgatcgtc
ctcatgccacactgcaaaaacctggatattttctctggctctggatcagagggtggagac
ttggagaccaacagcgcctgggaaaccttccagcgctaccgctgtttggaaaacagccaa
gcggtggtgaaaacccccatgactgatatctgcaggaattacatcttcagtgtgtcagct
cttctgcaccagggagttaaagcttgtcagtgcgacccgcagggctctctcagcacagtt
tgtgacccgagcggtggccagtgccagtgtcgccccaacgtggttggcagaaactgcgac
aaatgcgccccagcgaccttcctttttggcccgcaaggctgcaggccatgtgattgcagt
cctgaggggtccatccactccttctgccacgaggccaccggtcagtgtgagtgtattccc
ggagcatatgggcgccagtgcgaccgctgtctgcctggatactggggtttccctaactgt
cgcccttgcacttgcaatggccacgccgagcagtgcgacacactcacgggacagtgtctg
tcctgcagggaccacaccaatggacacaactgcgagaggtgtttgagcggctactatggt
gaccctgtccttggctctggagatcattgccgcccttgcatgtgtccggatggtcctggc
agtggcagacagttctccggcgcgtgttataagggccacgactccagccaggtgttctgc
gtctgcaaccagggatataaaggtgccaggtgtgaagaatgcgcccctggttattacgga
aacccacacgaggtgggaggagaatgccggccctgtcagtgcagcaacaacattgacatg
atggacccggagtcctgcgacgcccgtacgggtgcctgtctcaaatgcctgtaccacaca
gagggcgaggactgcaaccgctgcaagctgggttattacggcaatgcactgacccagagc
tgcagaaagtgtgtgtgtaatcatatgggcactgctgaggacacgtgcccctctccgggt
aactgcaactgtgacttgaacagcgggcagtgccagtgtcttcctaatgtggtgggacag
cactgcgataagtgtgcgccggacacgtggaatatagccagcgggaaaggctgcgaggcc
tgcgactgcgaccttaaccattccttcagctcatcatgcaatgagattatgggccagtgt
tcttgtaaacctgggtttggtggcagaacctgccgagagtgtagagagctgttctggggg
aatcctgaggtcaaatgccacgcatgtgattgtgacccacgaggcatcgcggagcagcag
tgcaacaaggtcacaggtcactgtgtttgcatggagggcgtttccgggccccgatgtgac
acgtgcgctcgaggatacactggcgagttcccacattgcgagcgctgccaccagtgcttt
gccgaatgggatgtaatcgtgggcgacctcaccaaccagacccacagactggttcagaag
gtcaataccatcaaagccaccggcattacaggaccctaccagaccaccatcaataacgtt
gaaagcagcgccaactcaatccgcaacatcctggcccagaatccagccactcagcctcta
acggagatccagggacttctcgaacaagctactgccttgatggctgaaatgaacaccaac
cttaatctgacggaggaaaccttgtcagagatctcatccgacaacaacagcacggacacc
aaactgaactccctcaaagaagaagcccagaaactggaacagacggtgaaagatctgcag
gaacaagtggattttgtgaagaattcagacattcgaggagctagagccagcgtgaatcga
tactacgagcagtcccagatggcggagattcgtgcgaatgcttccactgttgacccttat
aacctggttaatcagtctgccaccctccggacagaaacagaggacttgatgaaccagact
aaagaagagttcattcaaaggcaggatgactattcgaagaaactggacaacctcgctgga
cagctggagactctggacctgtctgagcttagtgagaagacatgtggcagtccagctggc
tcagagaactgtgccgactccccgtgcggaggcctgagctgtctggatggggaaggaaac
aggaagtgtggaggagagggatgtgatggcctcaccacgctggcccacaatgcctggcag
aaatccaaggactttgactttgagattatcagcgctatggaggaagtggacaagctctcc
aaaatggtgtcagaggcaaaggtaaaagcagatgaagctaaacttaacgctcaagaagtg
cttgcaaaaaccaatgagactaaaaaacgtgtggacggcagcaacgaggagctacgtcaa
ctcatcaaacagatcagagacttcctcactcaggatggagcggacctggaaagcattgag
gctgtggccaatgaagttctgcagatgcagatgcccaccacaccagcccagctccagaac
ctcaccgcggagatcagggagcgcgtgggcagcttgacagacgtcgaggacatcctcaac
cagagtgccgctgacatcctcagagcagaaagccttctggaacaagcccgcaaggccagg
aaggaggcgacagatgtaaaagacacagctgagatggtgaaggaggccttgcagcatgct
gagcgtgcccagagtacagtaaccgaggcactgaaacaggcaagcgctgacatcaaggga
acacaagacttgttggtttcggtggagtccgagacctcagactcggagctaaaactgagt
aacgccacccgaaggctcctgaagttagaaagcgatgtagctctgctgaaagaaaaagct
ctcaatacctccaccagcgccaacatcacagagaaagaggctgagagcatcaacgcgctg
gctgagcagctcaaaaaggatctggattcagagctgaaagacaagtacagtagtgttgag
gagctgatcacacagaaggctgaaggagtggccgaggccaagaaaagagcggagaaactc
caacaggaggccaaaaatctgctgctacaagccagcgacaaacttcagcttttgaaaaat
cttgagaagagctatgatgaaaatcagaagctgctggaggacaaagccaatgagctggtg
gatctggagaaggctgtgaaagaactgcttcaggagatcagtcacaaagtcaccgtttac
agcacctgtctgttttaa

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