Garra rufa (doctor fish): 141301788
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Entry
141301788 CDS
T11039
Symbol
rfx7b
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141301788 (rfx7b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Other basic domains
RF-X
141301788 (rfx7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
141301788
NCBI-ProteinID:
XP_073688081
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All DBs
Position
25:3197546..3224320
Genome browser
AA seq
1496 aa
AA seq
DB search
MNLTVMADDQQQQPGAPGPSLQSPEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIE
KLYLYLKLPSGPSSGNDKRTENQRGSASPAICDQNSMSSSRTQQMYAFNWIRNHLEEHPE
TSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRK
KAFVHMPSLPNLDLHKSGDGCELLESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSV
EELARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTGEANSFQPQVKTLPSPS
VDAKQQLQRKIQKKQQEQKLTSPLPTDAQARRAEAGTPGPGSSLTSGSPALLSPQPTIGF
VVSAVPSPITVQRNRQLMTSPSPVGAAEGKVVPVNFQVVTQPVKQSPKTPQNIPASPVGD
RLARHRYAQILPKPSATSAIALRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAPT
SSSSSSSTPTPLRPASAGISSTASLEESIQTQQAQNGASIMSLQSFGKAGRPSTTPTPLA
STVTNEVKVTFEAVNDSSSATAVDKQSTASGASKNERATKFRASSEPSLLIKASPVPERV
TRAKSDSANPSSTIMGALAPSSNNNDQPESTLYLTVTSQNVDAELSSICAVATASTSKDV
GLAPKSPRKRSASVLETHTIPVKRVFISQQPLDIGSNAKPGIVIAAKKIQRPGTPARPES
APCKVTLKPSSSLPTQILALSDTPIGALNTPQTVNPQSCSQIENEVADISPSETAPANSA
ALLQQISSDVSQEVSAVSELKSSLQDYSQQMQTEHKPIAVNPLANETTSQLTLQQDIVDF
AGGQASIDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISLQGQATVGQGT
ILSPHQTGTQFYHSSHSSATPIHTPTPTPTPTPTPTPTPTSEMLPGGHSLTRESPCSRMA
PVTPVDSILGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGYHDGSVVSSSP
VKPMQRPMATHPDKAKLEWINNRYNSTAGSPVISTNSTIGILPSYQDLVEDHFRKPHAFA
IPGQSLQSQSRHQDGTLGRLTTVSPVQQGQQTTLGSKQESFAVPAPLDNKGAGSTSASGG
ATFRCRSVSPAVRQRNLSGTTAQTVTAPRSVVSPFNCPLTSEVLNILSNNQSVVSATSLA
QRSQSVPLNIMMQSELLPVSHQAQQSNSAKITTVLLSKMDTDGDDAVRGLGVNNLPANYT
ARMNLTQILETTQGFPGGSNSQNQQLPLDSSPSPFDFQKTGYLISTGEEQVTFSGGDTQA
QSGSGLQQAEEQLQLQEPQLELQDQQLQLQDQQPLQDDPDLTQQHLLPQTSQQVVDQEQQ
EQLDFNTTVKDLLGEDSLNPSSQLVGQVASELSAVASDFSSDIRLTSDLSSSINDLNTLD
PNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLENKDQPTVEMLG
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaccgtgatggctgatgatcaacaacaacagcccggtgctcccggaccgtcc
ctgcagagccccgaggcgacggcgctgcagtacaacaagatcaagaattcaatttgcaaa
tctgtacaatcaaaagtggagagtatattgcaagatgttgagaagtttacagatatcgaa
aagctctacctctaccttaagttgccttctggtcccagtagtggcaatgacaaaagaact
gagaatcagaggggctctgcaagtcctgcgatatgtgaccagaattccatgtcgtccagc
cggactcaacagatgtacgcattcaactggatccgaaatcacttggaagagcacccggaa
acctcactgccaaaacaagaggtgtacgacgaatacaagagttattgcgacaatctgggt
taccatcctctaagcgcagctgatttcgggaagatcatgaaaaacgtttttccgaacatg
aaggcacgccgtttgggcatgagggggaaatctaagtactgctacagtgggctgaggaaa
aaagcatttgtgcacatgccgtcactccctaacctggacttacacaaatcaggagatggg
tgtgagttgttggagtcgaccggacagtctcccagtgctgaggacgagatgcgctcggca
gcttgcggtctggtctgcgaatgggctcagaaggttttgagtcgccagtttgatagcgtg
gaggaacttgcacgctttcttctcaacagtcactatataggcactaagtccatggcagct
cttactgttatgactggaaccccaacaggtatgaaaacccctacgcctgcctctgccttt
gtgccaactggtgaagccaactcattccagccccaagtgaagaccctcccttccccttct
gtagacgccaaacagcagcttcagcggaagatccaaaagaaacagcaggagcagaagctc
acctctcctttgcccaccgatgcccaggccagaagggcagaggcgggcacacctggccct
ggatccagcctgacctctggaagtcctgcactattgtcccctcaaccaaccataggcttt
gtggtgtctgctgttccaagtcctatcacagttcagagaaacaggcaactgatgacctct
ccaagtcctgttggggcggcagagggaaaagtcgtacctgttaacttccaggttgtgaca
caacctgttaagcagtccccaaaaacgccccagaatatccctgccagcccagttggtgac
cgcttggcccgacaccgatatgcccagattttaccgaaaccctccgcaacaagcgccatt
gcacttcgttcgcccccaacgctcctcatcaccaacagccccatcaagacggtgatgccc
acgccccatgttagctctgtaaatgtagtcaagatgactgcaatatcattagcgcctacc
agtagcagtagtagtagtagtactcctaccccgttgcgacctgcttcagcaggaattagt
agcacagcttccctggaagaatctatccaaacccagcaagctcagaatggggcgtcgatc
atgtctcttcagtcatttgggaaagctggacgtccctccacgaccccaaccccgttagcg
tccactgttaccaatgaagtaaaagtgacattcgaagctgtgaatgacagtagctcagct
actgctgttgataaacaaagcactgcatcaggggcaagcaagaatgaaagagccactaaa
ttcagggcttccagtgaaccctctcttcttattaaggcgtcccctgtgcctgagagagtg
acaagggccaagagtgactccgcaaacccttcaagtacaatcatgggggctcttgcccca
agcagcaataacaacgatcaaccagaaagtactttgtatttaactgttactagccagaat
gtagatgcagagttgtcatccatttgtgcggtggcaaccgcgagcacttctaaggatgtc
ggtctcgctccaaaaagtcctcggaaacgctctgcgtctgtattggaaacccacacaatc
ccagttaaaagagtattcatttcccagcaacctttagatattggcagcaatgccaaacct
ggtattgtaatagcagccaagaagattcagagacccggcaccccggcaagaccagagagc
gctccatgcaaagttacactgaaaccgagtagctctcttccgactcaaatcttagctctt
tccgacactcccatcggagccctgaacaccccccagactgttaatcctcagagctgttca
caaatcgagaacgaagttgctgatattagcccgagcgaaactgctcctgctaacagcgca
gctttgctgcagcaaatcagcagtgacgtttctcaggaggtatctgctgtaagtgagctc
aagagttcgctgcaagactactcgcaacagatgcaaaccgaacacaagccgatcgcagta
aatccgttggcaaatgagaccaccagtcagctcactcttcagcaggacattgttgatttt
gcaggaggccaagctagcatagactatttccccttcaatgatgatgatatgacccaggac
agtattgtagaagagcttgtacagatggaggaacaaatgaagctgaacagcagcttgcag
tcctacctgagttgcgttgatatatccctacaaggtcaagccacagttggccaaggaaca
atcctgtcgccccatcagacaggtacacaattttaccattcctcccacagtagcgccacg
ccaatccacacgccaactccgacacctacgccgaccccaacacctactccaactcctacc
tccgagatgctaccaggggggcatagcttgaccagagaaagcccttgttctcgaatggca
cctgttaccccagtggatagcatcttaggagggcgccatacacccatcagcactccgctg
tcgaactgcagcagcagcgttcctccgagccccatcgaatgccgcaatccctttgcgttc
actcctataaactccagtataactggatatcacgatggtagcgttgtgtctagcagtcca
gtaaaacccatgcaaaggccaatggccacccacccagataaagccaagctggagtggatc
aacaacaggtacaacagcaccgcagggtctcctgttatctccaccaactccaccattggt
attctgcccagttaccaggatctggtcgaggaccacttccgtaagccgcacgcctttgcc
atcccaggtcaatccctccagtctcaatcgaggcatcaggacggaaccttgggaaggttg
acaaccgtttctccagtgcaacaaggacagcaaaccaccctcggtagcaagcaagaaagt
ttcgctgttccagctccgctggacaacaaaggggcaggaagcacatctgcatctggaggg
gcgaccttccggtgtcgcagtgttagcccggcagtccgccagcgaaaccttagtggcacc
accgcacaaacagtcaccgccccacggtctgttgtttctccctttaattgccccttgaca
tctgaggtcctgaacattttgtccaacaaccagtccgtggtcagtgccaccagcttggcc
cagaggagccaatcagtgccgcttaacatcatgatgcagtctgagctgctgcccgtcagt
caccaggcgcagcaaagcaatagcgctaagatcaccaccgtgctccttagtaaaatggac
acggatggagacgatgcagtgcgagggctaggcgtaaacaacctacctgcaaattacaca
gcacggatgaacttaacccaaattctggagacaacacagggcttccccggaggctccaac
tctcagaaccagcagttgcctctggattcaagcccttcgccttttgacttccagaagacg
ggttacctcataagcacgggcgaggagcaagtcaccttctccggtggtgacactcaagca
caatcaggctctggactgcaacaagcggaagagcagcttcagctccaagagccacagttg
gagctgcaggatcaacagctgcaactccaggaccaacaaccgttgcaagacgacccggat
ctcacccagcagcacttgttgccccaaacctcgcagcaggtcgtggatcaggagcagcaa
gagcagctggacttcaacactaccgtcaaggatctcttgggggaggacagcctcaacccc
agctcgcaactcgtcggacaagtggcgtcggaactcagcgctgtcgcttctgacttttcc
agcgacatccggttgacttctgacctttcgagtagcattaatgacttgaacactttggac
cccaacttgctgttcgaccccagtcagcagcaggaccaatatgaagacgccacactggaa
gaactgaagaacgaccctctgtttcagcagatttgcagcgatactgtgaactctgctggc
ttcgattggctggagaataaagaccagccgaccgtggaaatgttgggataa
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