Garra rufa (doctor fish): 141301830
Help
Entry
141301830 CDS
T11039
Symbol
hal
Name
(RefSeq) histidine ammonia-lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00340
Histidine metabolism
grf01100
Metabolic pathways
grf04382
Cornified envelope formation
Module
grf_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
141301830 (hal)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141301830 (hal)
Enzymes [BR:
grf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
141301830 (hal)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
141301830
NCBI-ProteinID:
XP_073688129
LinkDB
All DBs
Position
25:complement(11113864..11128395)
Genome browser
AA seq
654 aa
AA seq
DB search
MPRFTVHVRDEWLTVPCKDATCSIKWLGFEALKRYIKNKPDNGGIQHVKDVCFVVRRCQG
FGLLDNDDTIEDVLEDNDFVELAIEGDTMSEDFIPSQPGTSHLTRLYREPEQYISLDGNS
LTSTDLVNLGKGLYKIKLAPEAEQKVVQSRELLDTIVKEKKIVYGITTGFGKFARTVIPI
SKLKELQENLLRSHSSGLGSPLSPERTRMLLALRINVLAKGYSGVSPETLHRMIQAFNAS
CLSYVPEKGTVGASGDLAPLSHLALGLMGEGKMWSPKSGWADAKYVLEAHGLKPISLKPK
EGLALINGTQMITSLGAEAVERAEAIARQADIIAALTLEVLKGTTKAFDSDIHELRPHPG
QKEVALRFRSLLDSDHHPSEIAESHRFCDRVQDAYTMRCCPQVHGIVNDTIEFVKKIINT
EINSATDNPMVFAERGETISGGNFHGEYPAKALDYLAIGVHELASISERRIERLCNPSLS
ELPAFLVNEGGLNSGFMIAHCTAASLVSENKVLCHPSSIDSLSTSAATEDHVSMGGWAAR
KALRVVEHVEQVLAIELLAACQGIEFLRPLRTTTPLEKVYDLVRAAVKPWIKDRFMAPDI
EAVHRLLVDQKVWNIAGPYIEKYCMEYIPESRPSSPTAFALDPPPSPRKRVRLE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttcacggtccacgtccgggacgagtggctaaccgttccatgcaaagatgcc
acctgcagcatcaaatggttgggttttgaagctctcaagcgctacatcaagaacaaaccc
gacaatggagggatccagcacgtcaaagatgtgtgttttgtggtcagaagatgtcaggga
tttggcttgctggacaatgacgataccatagaagatgtgcttgaggataatgacttcgtt
gaacttgctattgaaggggacaccatgtcagaggatttcattccaagtcaacctgggacg
tcacatctaacaagattatacagagaaccagaacaatacatttctctagatgggaacagc
ctgacctcaactgaccttgtgaatttagggaaaggcctgtataagattaagctggcccca
gaggcagagcaaaaggttgtgcaatcaagagagcttctggacaccattgtgaaagaaaaa
aaaattgtgtatggcatcactacagggtttggtaaatttgctcggactgtcatccctatc
agcaagctcaaggagcttcaggaaaatcttctgcgctcacactcctcaggtctgggaagc
cctttaagtcctgaaagaactcgaatgctgctcgcactgaggatcaatgttttggccaaa
gggtacagcggggtttcaccggagacgctgcacagaatgatccaggccttcaatgcctcc
tgtttatcatacgtcccggagaagggtacagtaggtgcgagtggagatctcgctcctctt
tctcacctcgcccttggtctgatgggagaaggcaagatgtggtcacccaagagtggatgg
gcggatgcaaaatacgttttggaagcacacggtctgaagcccatatctctgaagccaaag
gaggggcttgctctgatcaatgggacccagatgattacttctttgggagcagaggccgtg
gagagagccgaggctatcgcccggcaggctgacattattgctgccctaaccctggaagtc
ctcaagggcaccaccaaagcctttgatagtgatattcatgagctgcggcctcatccagga
cagaaggaagtggccctgcgcttccgatccctgttagactctgatcaccacccgtctgaa
attgcagagagtcatcggttttgcgacagggttcaagatgcctacaccatgcgttgttgt
ccacaggtccatggaatcgtcaatgacacaattgagtttgtcaagaaaatcattaataca
gaaatcaacagcgccacagataatcctatggtgtttgcggagagaggtgagaccatatct
ggcggaaacttccatggagaatatccagcaaaggctcttgactatttggcgatcggggtg
cacgagttggcctccatcagtgagagacgcatcgaacgtctctgcaatccctctctcagc
gagctgcctgcgttcctggtcaacgaaggaggcctgaactctggattcatgatcgcacac
tgcactgctgcgtctcttgtttcagagaacaaagtgctttgtcacccttcctctattgac
tctctgtccactagtgccgccacggaggaccatgtgtctatgggaggctgggctgcgcgt
aaagccctcagagtggtcgagcacgtcgagcaagtgctagctatcgagttgttagctgcc
tgtcagggcattgagtttctgcggcccctacgtacaacgaccccattggagaaagtatac
gatcttgtgcgagccgcagtaaagccctggattaaagacaggttcatggctccagacatt
gaagctgtacatcggctactcgtagaccagaaggtgtggaacattgctgggccatacatt
gagaaatactgtatggaatacatcccagagtcccgcccctcttccccaacagcctttgct
ctggacccgcccccatcaccacggaaacgggtcaggctggagtga
DBGET
integrated database retrieval system