Garra rufa (doctor fish): 141301895
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Entry
141301895 CDS
T11039
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141301895 (rfwd3)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141301895 (rfwd3)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141301895 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
WD40_CDC20-Fz
Beta-prop_THOC3
zf-C3HC4_2
Beta-prop_WDR5
EIF3I
zf-rbx1
zf-RING_UBOX
WDR55
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-RING_5
zf-C3HC4_3
WD40_Prp19
CFAP43_N
zf-RING_11
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
zf-RING_Vps41
Beta-prop_WDR36-Utp21_2nd
zf-C3HC4_4
zf-ANAPC11
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
141301895
NCBI-ProteinID:
XP_073688189
LinkDB
All DBs
Position
25:34103753..34120216
Genome browser
AA seq
665 aa
AA seq
DB search
MEDMEVEAAPASGEASVIVVSESGSSTEEEDVSMQVQGSSDRPRLSVRRQIRRRHIIGSH
TQFSTREESMRRLRELIVDNLAERLSGSQDARRSLSHANPSLMDPDPSGRHPAPAVNVPT
SDESSATGSSVSTDSEGTSAAAQPEEPQQESEPVSESVDPVSAAASPAGEAEADDGEGEN
CSICFEPWTSAGDHRLAALRCGHLFGFICISRWLTSGGNKCPQCNKPAKRGHIIFLYARK
LKAVDNAEEVRLKSRLELEQGSRRMEQLEVAQCRQQMQLISDENVRLRKEVEELRRWKAQ
AAFGSSQGASVSSSQRQDSSSGRHYVFSKAVLVSQSGGSRVLSYCEPLGCLLASQPSPQA
TFLPGFGVKKISTATLKPSQYVPIHSKQIRGLAFSRQQDSLLLSAALDNTIKLTSLMTNT
VVQAYNTGRPVWSCSWCHDNNNYIYAGLANGSVLVYDTRDTSTHVQELAPLRSSCPVVSL
SYIPRAASSTFPCGGLIAGTLEGGCFWEHVEGTTYTPHILPLESGSCTDIQVEPDSRHCL
VTYRPGRTNPSLRCVLMELSRTPQTDSSQPPICSCSPVQTFSAGSSCKLLTKNAVFKSPA
GEGATLVCAGDEATNSTMVWDAGTGALLQKMPADLPVLDICPFEVNQSSYLASLTEKMLK
VYKWE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatggaggtggaagcagctccagcatctggtgaggccagtgtgatcgtagtc
tctgaatctggaagcagcacagaggaagaggatgtttctatgcaggttcaaggctcgtct
gatcgacccagactttcagtccgtcggcagatcaggagaagacacataattggttcacat
acgcagttctccacacgtgaagaaagcatgcgtagactcagggaactcatcgtagacaat
ctggcagagcggctgagcgggtcccaggatgcacggcgttcactttcacacgcaaatcca
tcactgatggatcctgatcccagtggcaggcaccctgctcctgctgtgaatgtgccgacg
tctgatgaatccagtgctacagggtccagcgtttctacagattctgaagggacgagtgca
gctgctcaaccagaagagccacaacaagaatctgagcctgtctctgagtcggtggatcct
gtttcagctgctgcgagtccagcaggagaggctgaagcggatgatggcgagggagagaac
tgctccatctgttttgagccctggacctcggcaggtgaccaccgcttggccgctcttcgc
tgcggtcacctcttcggcttcatctgtatttcacggtggttgacgagtggaggaaataaa
tgtccacagtgcaataaaccagccaaacgtggtcatatcatctttctttatgcacggaaa
ctgaaagccgtggacaatgcggaggaagtgcgattaaaaagccgtttagagctggagcag
gggtcgcggagaatggaacagctggaagtcgctcagtgtcgtcaacagatgcagctcata
tctgatgaaaatgtgcgactgcgcaaagaggtcgaggagttgcggaggtggaaagctcag
gcggcgttcggctcctctcagggagcgtctgtctcatcgtcccaaaggcaggactcgtcc
agcgggagacattatgtcttctctaaagctgtgctggtgtctcagtcaggaggcagtagg
gttttgtcctactgtgagcctctcggctgcctgctggcatctcagccttctccacaagca
acgtttctgccaggcttcggtgtgaagaagatcagcactgcgactctcaaacctagtcag
tatgttcccattcactccaaacagatcagaggtctggccttcagccgacaacaggacagc
cttctgctgtctgcggccctcgacaacacaatcaaactcaccagtctgatgacaaacaca
gtggttcaggcctacaacacgggcagacctgtgtggagctgcagctggtgccatgataac
aacaactacatctacgccggtctcgccaacggctctgtgctggtgtacgacacgcgggac
accagcactcacgttcaggagctggcccccctgcgctccagctgtccagtggtctccctg
tcttacatcccgcgcgctgcgtccagcacgttcccgtgtggcggcctgatcgctggtacg
ctggagggcggctgtttctgggagcacgtggagggaaccacatacacgcctcacatcctg
cctctagagtctggcagctgcacagacatccaggtggagccggacagcagacactgtctc
gtcacgtacagaccaggtcgcacaaacccatcactgcgttgtgttttaatggagctcagc
cggacgcctcaaacagacagcagtcagccgcccatctgctcctgttctccagtccagacc
ttcagcgctggatcctcctgcaagttactcaccaagaacgccgtgtttaagagtccggca
ggagaaggagccacactagtgtgtgctggagatgaggccacaaactccaccatggtttgg
gatgctggcactggtgctctgcttcagaagatgcctgcggatctccccgtgttggacatc
tgtccgtttgaggtcaaccagagcagttatctggcctctctgaccgagaagatgctgaag
gtctataaatgggaatga
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integrated database retrieval system
