Garra rufa (doctor fish): 141301919
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Entry
141301919 CDS
T11039
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
grf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141301919 (smc1b)
04114 Oocyte meiosis
141301919 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141301919 (smc1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141301919 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
141301919 (smc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
AAA_23
SbcC_Walker_B
AAA_13
Cys_Met_Meta_N
Motif
Other DBs
NCBI-GeneID:
141301919
NCBI-ProteinID:
XP_073688221
LinkDB
All DBs
Position
25:complement(18595124..18612110)
Genome browser
AA seq
1234 aa
AA seq
DB search
MGFLKQLEVENFKSWRGKQTIGPFKRFNCIIGTNGSGKSNVMDALGFVMGERAINLRVKH
TRDLIHGAHIGKPVSTFASVSMIYCGDDNEEITFSRRISGDSSEYRVNGKQVTLGKYTGE
LEKIGIVVKAKNCLVYQGAVESIAMMNPRERTKMFERISGSGELSAEYDAKLAALQKAKE
DTKFHFSRKKAATAEKKQVFKDKTEAEKYQALVDEHKENKLQMTLFQLFHNEKKIDAQLE
SLRDMQDAAAQQKISLDDYEQIVKAQKKEHGRLNRELQQLEKEIRSQEQILNQQRPQYIK
AKVNTSHHEKKVEEACRSLEKNQSQQAKKEQELDELRSELTELERAWKASERQMEEEAAQ
RGAGVQLEESQMERYKELKELARKKGAVLNQTAEKLHWEVKADCEKLQFDLRRKSEIQTN
IKHSQTRLEDLSRRAEKLEEFANSTRNAIEEQRQQEEQLAEELSRGFVRMEEVNEKLTQV
LTELQNARLDSQENRRQQRRDEVLESLRRLYPDGVYGRLVDLCQPIHRKYQVAVTKVFAK
NMNAIVVTSAKVAHDCIRFLKEERAEPETFLPIDYIDVRPLNERLREVQGAKMMVDVVQC
AQNAPQLKRVIQYVCGNTLVCETLKDARRIAFDGPERLQTVALDGTLFRKSGVISGGSLD
LRSKARRWEEKDMNKLKEEKDQLSSELRSLMKLKRKEEDLKQIRAQSQGNQTRLKYSNSE
LDSIRKNGIPACQAEISKLRSELSNLEAQIEIQTKSVEVKDNEMKAVRDKINQMEDVVFA
DFCAEIGVANIREYEQDYLRMQQELEKKCLQFESQHTRLSTQMEYEQAQLEKLVKQMKKI
EEIIEKEENVVISLKEVEDRLLIAVEQNQSNVIELNNQLSKKTTLVKEAKTELDKTLKGL
QERSRVLVKLQKEMICTEAALEHLRLSKHNLLLACKIDGLPLTLISGALDDISDIQLDSE
SESISTLDIFEREAQMMFDYSTLDRGLKALTEDSEVETELEKLKEGISSLETMIMMSRAP
NLKALEKIREVKDSFREVMDAFEMSTHVTKKCSQEFEQVKSRRFHLFSQCFEHVSVIIDQ
IYKKLCRNASAQAILTAENPNEPYLDGINYNCVAPGKRFMAMDNLSGGEKVIAALALVFA
IHSFRPAPFVVLDEVDAALDNTNIGKVTGFFQMMSRESCQIIVISLKEEFYSRADALLGV
YSMFDECMFSRLLTLDLTPYPLNDERATDREKDK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcttaaaacaattagaagtcgaaaatttcaagtcctggcgaggaaaacaaacc
atcggcccatttaaaagatttaattgcataattggcactaatggatcaggcaaatctaat
gtcatggacgctcttggattcgtgatgggagagagagccataaatcttcgtgtgaaacac
accagagatctcatccacggagcccacattggcaaacccgtgtccacttttgccagcgtg
agcatgatatactgtggagacgacaatgaagaaattactttcagcaggcgcatttcaggc
gattcatctgagtatcgtgtgaatggtaagcaggtcactttggggaagtacactggagag
ctggagaagatcggcattgtggtgaaagcgaagaactgtctggtgtatcagggtgctgtg
gagtcaattgcaatgatgaatcccagagaacgaacaaagatgtttgaacgaatcagcggc
tccggagagctgagcgcagagtatgatgccaagctggctgccctgcagaaggccaaagag
gacaccaaattccactttagcaggaagaaagcagctactgctgagaagaagcaagtcttc
aaagataagactgaggcagaaaagtatcaggcactagtggacgaacacaaagaaaacaaa
cttcagatgaccctctttcagctcttccacaatgagaaaaaaatagacgcacagttagaa
tcactgagggacatgcaggatgccgcagcgcagcagaagatcagcctggacgactatgaa
caaattgtgaaggctcagaagaaagaacatgggcggctaaatcgagaacttcagcagttg
gagaaggagatcagatctcaggagcagattctcaatcagcagaggcctcagtacatcaaa
gctaaagtgaacacctcccaccatgagaaaaaagtggaggaggcatgcagatcgcttgaa
aagaaccaaagtcagcaggccaagaaggagcaggagctagatgagctaaggagcgagctg
actgagttggagagggcctggaaggcctctgagagacagatggaggaggaggcggctcaa
agaggagctggagtgcagctagaggagagccagatggagcggtataaggagctcaaagag
ctggccaggaaaaagggagctgttctaaaccaaaccgcagagaagctgcattgggaggta
aaagccgactgcgagaagctccagtttgacctgaggaggaaaagtgagatacagacaaat
attaaacactctcaaactcggctggaagatctcagcagaagggcagagaagctggaggaa
tttgccaacagtactaggaatgctattgaggagcagcgtcagcaggaagagcagctggca
gaggagctgtcgagaggctttgtgagaatggaggaggtgaacgagaagctcacccaggtg
ctgaccgagctgcagaacgctcgtctggacagccaagagaaccgacgacagcagagacga
gatgaggtcctggaaagcctcaggagactctaccctgatggagtgtatggccgtctagtg
gatttgtgccaacccatccacaggaaataccaggtcgctgtcaccaaggtgtttgccaag
aacatgaacgctattgttgtgacgtctgcaaaagtggctcacgactgcatccgatttctg
aaagaagaaagagccgaaccagagacattccttcctattgactacatagatgtgcggcct
ctgaatgagcgtctgagagaagtgcagggagccaaaatgatggtggatgtggttcagtgc
gctcaaaatgcccctcagctgaagagggtgatccagtatgtgtgtgggaacaccttagtt
tgcgagactctaaaagatgcccgtcgcattgccttcgatggccctgagcgccttcagacg
gtggctcttgatggcaccttgtttcgcaagtctggggtgatttcaggaggctcgttggac
ctgcgcagtaaagctcgacgctgggaggagaaggatatgaataaactgaaggaggagaag
gatcagctgtcgtccgagttgcgttccctgatgaagctgaagcgcaaagaggaggattta
aagcaaatcagggctcagtctcagggaaaccagactcgcctcaaatactccaattcagaa
ctggactccatacgcaagaatggcatcccagcttgtcaggctgagatttccaaactcagg
agtgagctttccaacctcgaggcccagattgagatacagactaagagtgtagaagtaaag
gataatgagatgaaggccgtcagagacaaaattaatcagatggaggatgtggtgtttgcg
gacttctgcgcagagatcggtgtggctaacatccgtgagtacgagcaggattatctccga
atgcagcaggagctcgagaagaagtgcctgcagtttgagtcccagcatacccgactaagc
acccagatggagtacgaacaggctcagctggaaaaacttgtcaaacagatgaagaagata
gaagagattatagaaaaagaggagaacgttgttatcagcttgaaagaggtagaagacaga
cttttgatagctgtggagcagaatcaatcaaatgtcatcgaactcaacaaccagctgtcg
aaaaagacaactttagttaaagaagccaagacagagcttgataagactctcaaaggctta
caggagagatccagggtgctggtgaagcttcagaaggaaatgatctgcactgaggcggct
ctagaacacctgagactgagcaaacacaacctgctgctggcctgtaagatcgacggtcta
ccgttgacactgatctctggagccctagatgacatcagtgacatacagctggactcagag
tctgagagtataagcactctagacatttttgaacgcgaggcgcagatgatgtttgattat
tcaacactggaccgtggccttaaggccctcactgaagacagtgaagtggaaactgagttg
gagaagctcaaagagggcatctcctctttagagacgatgatcatgatgtccagagctccc
aacctgaaagctctagagaagatcagagaggtgaaagacagcttccgggaagtcatggat
gcatttgagatgagcacacacgtcactaagaaatgcagtcaggagtttgagcaagtgaag
tccagacgcttccatctcttcagccagtgctttgaacatgtgtctgtcatcatcgaccag
atctacaagaagctctgcaggaacgccagcgctcaggccattctcactgctgagaaccca
aatgagccctacctggacggcatcaactataactgtgtggctcctggaaaacggttcatg
gccatggacaacctgtcaggaggagagaaggtcattgctgctctcgctttggtctttgcc
attcacagctttcgtcctgcccctttcgttgtgctggatgaggtggatgccgccctggac
aacacaaatattggcaaggttacaggatttttccagatgatgtccagagagagctgccag
atcattgtgatctccctgaaggaggagttctactcacgggcagatgcacttcttggagtc
tattcaatgtttgacgaatgcatgtttagccgtctgctcaccctggacctcaccccatac
ccactcaatgacgagcgcgccacagacagagaaaaggacaaatga
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integrated database retrieval system
