KEGG   Garra rufa (doctor fish): 141301985
Entry
141301985         CDS       T11039                                 
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03250  Viral life cycle - HIV-1
grf03272  Virion - Hepatitis viruses
grf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    141301985 (tsg101a)
   03272 Virion - Hepatitis viruses
    141301985 (tsg101a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    141301985 (tsg101a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:grf04131]
    141301985 (tsg101a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141301985 (tsg101a)
Membrane trafficking [BR:grf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    141301985 (tsg101a)
Exosome [BR:grf04147]
 Exosomal proteins
  Proteins found in most exosomes
   141301985 (tsg101a)
SSDB
Motif
Pfam: UEV Vps23_core HAUS1 DUF3450 Het-C UQ_con ANG-1 CC_Bre1 SlyX FapA Exonuc_VII_L Prominin Xpo1 FlaC_arch Spc7 TPR_IF140_C APG6_N EMP24_GP25L DUF5685 CCDC90-like TcaA_2nd DUF4200
Other DBs
NCBI-GeneID: 141301985
NCBI-ProteinID: XP_073688286
LinkDB
Position
25:29493286..29512167
AA seq 390 aa
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPVMDPYVFNDGSSRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQPPYQAFQAAGPPNQSYMPGMPAVSPYGPNPN
PCGYPGYPYPGGNAYPATGGPAHYTSQTPVTTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEDMVSRLDQEVAEVDRNIELLKKKDEELSE
ALEKMENQSENNDIDDVIIPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggctgttgtcaacgaaggagctcttaaaaagatgctgaagcaatacaagtacagagat
ctcactgtcagagagataacaaacgtcatctctcagtacaaagacctcaaacctgttatg
gatccgtatgtgtttaatgacggatcatccagagacttgatgagcctcacaggaactgtt
ccagttagttatagagggaatgtgtataatatccccgtgtgcttgtggctgctggatacg
tatccctacaatcctcctatatgctttgtgaagcccacaagtgcgatgatgatcaaaacc
ggcaaacacatcgacgccaacggcaagatctacctgccatacctgcacgagtggaaacat
cctcagtcagatctgtacggcctcatccaggtcatgattgttgtgtttggtgaggagccg
cccgttttctccagacccaccacacaacctccttaccaggccttccaagcagccggaccc
ccgaaccagtcctacatgccaggaatgccagcagtatctccctatgggccgaacccaaac
ccctgtggttacccaggctacccttacccaggaggcaatgcttatcctgccacaggcggt
ccagcacattacacttcccagactcctgtcactactgtgggtccaagtcgtgatggtacc
atcggcgaagacaccatccgagcgtcgctgatctcagccgtgagcgataaactgcgctgg
agaatgaaggaggagatggacagagcacaagccgagctagacgccctgaagagaacagag
gaagacctgaagaaaggacaccagaagctggaagacatggtgtcccgcctggaccaggaa
gtggctgaggtggacagaaacatcgagctcctcaagaagaaggacgaggaactgagcgaa
gctctggagaagatggagaaccagtcggagaacaacgacatcgacgacgtgatcatccca
acagcgccgctctacaaacagatcctgaacctgtacgcagaggagaacgccatcgaggac
accatcttctacctgggagaagccctgcgtagaggagtcatcgacctggaggtcttcctc
aagcatgtgcgtctgctgtcccggaagcagttccagctgcgagcgctcatgcagaaagcg
cgaaagacggccggactcagtgacctctactga

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