Garra rufa (doctor fish): 141302135
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Entry
141302135 CDS
T11039
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04310
Wnt signaling pathway
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141302135
09133 Signaling molecules and interaction
04519 Cadherin signaling
141302135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141302135
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
grf04030
]
141302135
04515 Cell adhesion molecules [BR:
grf04515
]
141302135
Peptidases and inhibitors [BR:
grf01002
]
Mixed peptidases
Family P2
141302135
G protein-coupled receptors [BR:
grf04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
141302135
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141302135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Laminin_G_1
Ig_CLSTN
Cadherin_FAT4_N
EGF
Ig_Cad99C_N
EGF_laminin
Dicty_CAR
EGF_TEN
hEGF
Fibulin_C
Frizzled
Motif
Other DBs
NCBI-GeneID:
141302135
NCBI-ProteinID:
XP_073688425
LinkDB
All DBs
Position
25:21338328..21410045
Genome browser
AA seq
3009 aa
AA seq
DB search
MELPVIWMCFGLLIHLPPSGCLDLHLSGSLQPGATLANVSIGPGWTYRIDRGLTDKSLRH
FLKIGRSDGLLSVGRKVDCTRLPRNPLPLYLRIKSLLSENFILLHFNTFVHGQNCFIKYK
RKNLNPDAYIYLLTGYETCFSLDSLPINIYERLPVSMRNSQMFRGRCVEKDQRRVVSLRS
ANLCLPHKQRDEANLLCLMPNSLNSSLFVDVKLYLSRVHTGSELDLWAKRQKRNVNSAPQ
FQLPNYQVSVPENEPSGTRVITLKAFDADDGDAGVIEYDMEALFDSRSNNLFQINPETGG
ITTLQPLDREVKDTHVFKVTVTDKGTPKRSAIAYLTITVSDTNDHTPVFEQNEYRVSIRE
NVEVGFEVMTIRATDGDAPSNANMIYKIVNDDEVNTYFEIDPRNGLVKTRVRPDREVKSQ
YRLFVEANDQGREPGPRTATATVHIFIEDENDNYPQFSEKRYVVQVSENIAVNTQVAVVK
ATDKDAGNNAKVHYSIINGNIKGQFYIHSPTGVIDVISPLDYEMIREYTLRVKAQDGGRP
PLINGTGIVVIQVLDVNDNAPMFVSTPFQASVLENVPVGYSVLHIQAIDADSGDNAHLEY
KLTDTSSTFPFTINNNTGWITVSAELDRETTEFYNFGVEARDRGVPTMSSSASVSVTILD
VNDNVPTFTQHLYNLKVNEDAVVGTSVLTVTAVDRDVNSVVTYQISSGNTRNRFAITSQS
GGGLITLALPLDYKQERQYLLTITASDGTRHDTAQVFINVTDANTHRPVFQSANYQVLVS
EDRPVGSTVVIISATDEDTGENARITYVMEDNVPQFKIDPDTGAITTQIEIDYEDQASYT
LAIIARDNGIPQKSDTTYVEIIVLDANDNAPQFLRDIYKGTVFEDAPVYTSVLQVSASDR
DSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKLDRENVAVYSLKAFAVDKGVPPLK
ASVDIHVSVLDINDNAPVFEKDELYFYVEENSAAGSTLARVSATDPDEGTNAQILYQIVE
GNIPEVFQLDIFSGDLIALTDLDFETKMEYVIVVQATSAPLVSRATVHVLLVDVNDNVPV
LQDFEIIFNNYITNKSSSFPTGVIGKVPARDPDVSDKLLYTFVEGNELNLMILNQDTGDL
KLSKDLDNNRPLEATMRVTVSDGLHQVSALCTLRVTIITDDMLTNSITVRLENMSQERFL
SPLLSLFTEGVAAVLSTSPDGVFVFNVQNDTDVSGSILNVTFSALLPGGAPGRYFPSEEL
QEQLYLNRTLLTLISTQRVLPFDDNICLREPCENYMKCVAVLKFDSTAPFVASNTVLFRP
IHPVNGLRCRCPDGFTGDYCETEVDLCYSGPCQNNGKCRSREGGYTCECPQDFTGERCEV
NARSGRCVPGVCKNGGRCVDLLVGGFLCQCPDGEYEKPYCEMTTRSFPGQSFITFRGLRQ
RFHFTLSFTFATRERNALLLYNGRFNERHDFIAIEIIEEQIQLTFSAGESKTTVTPFVAG
GVSDGQWHTVHLHYYNKPNIGRLGIPHGPSEEKVAVVAVDDCDLAMALRFGGQIGNYSCA
ARGTQTGQKKSLDLTGPLLLGGVPNLPEDFPVQNRDFVGCIRNLTIDSKPIDMASFISNN
GTSAGCAAKHDFCSLVVCQNGGVCVNRWNTHTCNCPLGYGGKNCEHVMPAPLHFDGHALV
SWSETDITIAIPWYMGLMFRTRKSTGVLLQASAGELSKISLMVNNRHLRFQVFLGVRRVA
LLDFPQVCVNNGEWHHVLVELKSGKDGKDIKYMALVSLDYGMFQRTVEIGNELPGLKLRN
LFIGGLLKKDGTVQAGFTGCIQGVRIGETSTNTANINIRQAARIRAKDGCNVPDACQSNL
CPSHSRCTDNWASHTCVCEPGYFGRDCVDACLLNPCEHTSSCVRKPSTKSGYSCQCGHNY
YGQYCENKGDQPCARGWWGYPTCGPCNCDVSRGFKRDCNKTTGECSCKDNYFRPLGADTC
YPCDCFHLGAHSRTCDPVTGQCPCKMGVVGRQCNRCDNPFAEVTVGGCVVVYDGCPKAFE
DGIWWPRTMFGGPAATNCPKGSSGTAIRHCSDDKGWFPPELFNCTSLSFSKLKKESEDLH
ANASRMDGERSKSLAGLLHSATDHTDRLFGNDVRTAYHLLASVLEHESLQQGFELTATHD
ADFNQNIFKAVSAILDPVNKEHWEKIQRSDGGTAHLLHHFEEYANALVENTKKTYLRPFT
IVTDNMIVALDFLDSAANQDKIPRFQEVKEVYSKELESSVVFPNLLAMAKKSKDAFTTEP
PAQIEPTESFISMDGSDTIDLTPSIKKRRHAEQPDQPAVGMVMIYRSLGRLLPESYDPDR
RSLRLPTRPVINTPVVSVVVHKDGEPLLTPLQRPITLNFRLLETHERTKPVCVYWNHSIL
VSGGGAWSSKGCELVFRNSTHISCQCNHMTSFAVLMDISKREHGDVLPLKVVTYTTVSAS
LVALLITFLLLAILRKLHSNLHSIHKNLVAAIFLSEFIFLTGINQTDSPFVCTVVAILLH
YSYMCAFAWMFVEGLHIYRMLTEMRNINQGHMRFYYAIGWGIPAIITGLAVGLDPQGYGN
PDFCWLSVYDTLIWSITGPISIVVLINTVLIVLAAKAACGRRQRTEKSGAISALRVAFLL
LLLISATWLLGLMAVNSDVLSFHYLFAILSCLQGICIFFFHCILNKDVRRNLKSVFTGKK
VPVDDPSTTRATLLTRFLNGDVYTEDGGLYRTTIGESTVSLESSVRSGKSHGSSYLVSNL
REKKHSISSNGGNVVHNKGDSLLFFHKSKKAEDSDSDSELSVDEHSSSYASSHSSDSEDE
ARHSRTKWNNERTPIHSTPKVDAVSSQGKPYWPEEPPTASENEEPGGPEKLRVETKVNVE
LHQGNKLNHNGDVSQSESSPSQPNSNQLPRRGILKNKITYPPPLTDKNMKNRLREKLSDY
NPPQIPRKTPSLGSNEGVRSGTEANSIIIKPPPLPPQSALNGITVELGTSPVTLADEDFD
SDGSNETSI
NT seq
9030 nt
NT seq
+upstream
nt +downstream
nt
atggaattaccagtgatatggatgtgctttggattacttattcatctcccaccgtctgga
tgcttggatttacatctatcgggatccctccagcctggtgcaacactggcaaatgtatca
atcggaccaggatggacgtacagaatcgacagaggtctcacagataagtctttacgacac
tttctgaagatcgggagaagtgatgggcttctatcagtcgggcgcaaagttgactgcact
cgtttaccgagaaatcccctgccactgtatttgcggattaaatcactactttctgaaaac
ttcatactgcttcatttcaatacgttcgtgcatggtcagaactgcttcattaaatacaaa
aggaaaaacctaaatccagatgcgtatatatatctgttgactgggtatgagacttgtttt
tctttggactccttacctataaacatttacgaacgtttgcctgtatccatgcggaattcc
caaatgtttcgcggtaggtgcgtggagaaagaccagcggcgtgttgtttccctcaggagc
gcgaatctctgtttacctcataagcagcgagatgaggcgaatttgctttgtttaatgcct
aactcactaaacagctctttatttgtagatgttaagttatatttaagcagagtacacact
ggaagtgaattagacctgtgggctaaacgtcaaaaaagaaacgtgaactccgctcctcag
tttcaactcccaaactaccaggtatcagtgcccgagaacgagccttcgggaacgcgcgtt
attaccctcaaagcgttcgacgccgatgacggagacgccggtgttatcgagtacgacatg
gaagctctttttgacagccgatcaaacaatttatttcaaattaaccctgaaacaggcggt
ataactactttacaacctctagacagggaggttaaagacacccatgtgtttaaagttact
gttactgataagggaacccctaaaagatcagctattgcgtacctcactatcacagtcagt
gatactaacgaccacacgccggtttttgaacagaatgagtatagggttagtattcgagaa
aatgttgaagtaggctttgaagtgatgactattagggctacagatggagacgccccttca
aatgccaatatgatttacaagattgtgaatgatgatgaggtgaacacttactttgaaatt
gatccaaggaatggcttagtcaaaaccagagtcagacctgacagagaagtcaaatcccag
tataggctttttgtcgaagctaacgaccagggcagagagcctggtccacgtaccgccaca
gccacggtgcacatttttatagaggatgagaatgataactaccctcagttcagtgagaaa
cgatatgtcgttcaagtttctgaaaacatagctgtgaacactcaagtggctgtggtgaag
gctacagataaagatgctggtaataatgcgaaggtgcattacagcatcataaatgggaat
ataaagggccagttttacatacactcccctacgggagtcattgatgttatcagcccacta
gattatgagatgataagagagtacaccctccgagtgaaagctcaagatggaggaaggcca
cctcttataaatggcacaggtatagttgtaatccaagtgttggatgtaaacgacaatgca
cccatgtttgtcagcacaccttttcaagcctcagtgttagaaaatgttcctgtaggttac
tctgtgttacatatccaagccatcgatgctgattcaggcgacaatgctcatttggaatac
aagctgactgatacgtcatctacttttccgtttactatcaataacaacactggatggatt
acggtgagtgctgagctggacagggagactacagagttttacaatttcggtgttgaggcc
agagaccgcggggttcctacaatgtcatcttcagctagtgtaagtgtcacgatactagat
gtcaacgacaatgtcccaaccttcacacagcacttgtataacctaaaggtcaatgaggat
gcagttgtgggcaccagtgtgcttacagtcactgctgtagacagggatgtaaacagcgta
gtcacatatcaaatatcaagtgggaacacacggaacaggtttgccatcaccagccagagc
ggaggaggacttattactttagcactacctctggactacaagcaagaacggcagtatctc
ttaacaatcaccgcctcggatggcacacgccatgacacagcccaagtcttcattaatgtg
actgatgccaacactcatcgaccagtatttcaaagtgccaactaccaagttttagtaagc
gaggaccgtcccgtaggctcaaccgtggtaatcatcagtgccaccgatgaggacactggt
gaaaacgcccgtattacttatgtaatggaggacaatgtcccacagttcaagattgatcct
gacaccggtgccatcactactcagattgagattgactatgaagatcaggcctcctacaca
ctcgctatcatagcccgagacaatggcatcccccagaaatcagacacaacctatgtagag
atcatcgttcttgatgccaacgacaatgcacctcagttcctccgggacatatataaggga
acagtgtttgaggatgcaccggtgtacactagtgttctccaagtgtctgcttccgacaga
gactcaggatctaatggtcgactcagctacacctttcagggaggggatgatggtgaggga
gacttttttattgagccctactctgggatcatcagaacggctcgcaagcttgacagggaa
aatgttgctgtgtacagcctcaaggcatttgcagtggacaaaggagtgcctcctctcaaa
gcctctgtggacattcatgtgtccgtgctggacataaacgacaacgcccctgtgtttgaa
aaggatgaattgtacttttacgtagaggaaaacagtgcagcaggatccactcttgcccgc
gtaagtgccacagacccagatgaaggtaccaatgcccagatcctctaccagattgtcgag
ggcaacattcctgaagtcttccaactcgatatctttagtggagatctaattgcccttact
gacctagactttgagaccaagatggagtatgtaatagttgtccaggccacttctgcccca
cttgtgagccgggccactgtacatgtcctcctagtagatgtcaacgacaacgtccccgtt
ctacaagattttgagattattttcaacaactacatcaccaataaatccagcagctttccg
acaggagttatcgggaaggtgcctgctcgtgatccagatgtgtccgataagctcctctac
acgtttgttgagggaaatgagctcaacctgatgattctcaaccaagacactggggaccta
aagctgagcaaggacttagataacaacaggccccttgaggccacaatgagggtgacggtt
tcagatggactccaccaggtctcggccctctgtactctacgagtgaccatcatcacagac
gacatgttaaccaacagcatcactgttcgtctggagaacatgtctcaagagcgtttcctc
tcccctctgctgtcactctttaccgaaggcgtagctgcagtcctgtccaccagtcctgat
ggtgtctttgtcttcaatgtccaaaacgacacggacgttagcggcagcattcttaatgtc
actttctctgccctgcttccgggtggagctccgggacgttatttcccatcagaggagctg
caggagcagctgtacctgaaccgtacgttgttgacgctgatctcgactcagcgtgtactg
ccgtttgatgataatatctgtttgcgggagccctgtgagaactacatgaagtgtgtagcc
gttctgaagtttgacagtacggcccccttcgtggcgtccaacacggttcttttcaggccc
atacaccctgtgaacgggttacggtgtcgatgtcctgatggtttcactggagactactgt
gagacggaggtggacctttgttactcaggcccgtgtcagaataacgggaagtgccgtagt
cgagaggggggatacacctgtgagtgcccgcaagattttacaggagagcgatgtgaggtg
aatgcgcgttcaggccgctgtgttcctggtgtttgtaagaacggaggcaggtgcgtggat
ctgctggtgggaggtttcctgtgccagtgtcctgacggcgagtacgagaagccctattgc
gagatgaccacacgcagcttccctggccagtccttcatcaccttcagaggcctgaggcag
agattccacttcaccctctcctttacgtttgctaccagggagagaaacgccctgctcctg
tataatggcaggtttaatgaaaggcacgatttcattgcaattgaaattattgaagagcaa
atccagctgaccttctctgctggagaatctaaaaccacggtgactccttttgtagctggt
ggggttagtgatggacaatggcacacagtacatctacattactacaacaagcccaatata
gggcgtcttggcattcctcacggcccctccgaggaaaaggttgctgtggttgccgtcgat
gactgtgatctggccatggctctgcgttttgggggacagattggaaactacagctgtgca
gcccgtggcacccaaacaggccaaaagaaatcactggatcttacgggacctctgctcctg
ggtggcgtcccaaacctccctgaggatttccccgtacagaaccgagactttgtgggctgc
ataaggaacctgactatcgacagcaagcccatagacatggccagctttatctccaacaat
ggcacctcagcaggttgtgcagcaaaacatgatttctgtagcctggttgtttgtcagaat
ggaggcgtatgtgtgaatagatggaacacccacacctgtaactgcccattaggctacgga
ggaaagaactgtgaacatgttatgcccgctcccctgcatttcgatggccacgcgctggtg
tcgtggagcgagacggatatcaccatcgccattccttggtacatgggtcttatgtttcgc
acccgaaaaagcacaggcgttctgctacaggccagcgctggagagctttccaagattagt
cttatggtgaacaacaggcaccttcggttccaggtgtttctgggcgtcagacgtgtggca
ctcttagattttcctcaggtatgcgtgaataacggtgaatggcaccatgtgcttgtcgag
ctcaaaagtggaaaagacggcaaagacatcaaatatatggctctcgtgtctttggactat
ggcatgtttcagaggacagtggaaattggtaatgagctgcctgggcttaaactgcgaaac
ttgtttatcggtggactgcttaagaaagacggcactgtgcaggctggatttactggctgc
attcagggtgtgcgaattggcgagacatccactaacactgccaacatcaacatacggcaa
gcggcgcgaatccgtgcaaaagacggatgtaacgtgcctgatgcttgtcagtccaacctg
tgtccatctcacagccgctgcacggacaactgggcatctcacacgtgtgtctgcgagcca
ggttattttggcagagattgtgtggatgcgtgtctcttgaacccttgcgaacacacttcc
tcctgtgtccgcaaacccagcaccaaaagtggctacagctgtcagtgtggacacaattac
tatggccaatactgtgagaacaaaggggaccaaccttgtgctcgcggctggtggggatac
ccgacctgtgggccctgtaactgcgatgtcagcagaggcttcaaaagggactgtaataaa
accacaggagagtgtagctgtaaggacaattactttcggcctcttggtgcagacacttgc
tacccgtgtgattgttttcaccttggagcgcattcccggacatgtgaccctgtaacgggc
cagtgcccgtgtaagatgggtgtagtgggtcgtcagtgtaaccgatgtgacaaccccttc
gcagaggtgacagtcgggggatgtgtcgtggtttatgatggttgtcccaaagcctttgaa
gacggtatctggtggccccgcaccatgtttggaggtcctgcagccacaaactgccccaaa
ggatccagtggcacagctatccgccattgcagcgatgataaaggttggtttccacctgag
ctcttcaactgcacttccctcagcttttcaaagctaaagaaagagagtgaggatcttcat
gctaatgcttctcgaatggatggagaaagatcaaaaagccttgcaggtctgctgcactct
gccacagaccacacggatcgtctctttgggaatgacgtgaggactgcctaccatctgctg
gccagtgtgttagagcatgagagtctgcagcagggctttgagctcaccgccactcacgat
gctgatttcaaccagaacatctttaaagctgtaagtgccatccttgaccctgtcaacaag
gagcactgggagaagatacagcgctctgatggtgggacggcacatttgctgcatcacttt
gaggagtacgccaacgctctggtagagaacacgaagaagacctacctgaggcccttcacc
atcgtcactgacaacatgattgttgcattggattttctggactctgctgcaaaccaagac
aagattcctcgatttcaggaagttaaagaggtgtactcaaaagagctggagtcatctgtt
gtgttcccaaacctgctcgccatggcaaaaaagagcaaagatgcttttaccacagagcct
ccagcccagattgaaccaactgagtctttcattagtatggatggatcagatactattgat
ctaacaccatccattaagaaaagacgccatgcagaacaacccgatcaacctgctgttggg
atggtgatgatctacaggtcgctgggtcgactccttccagagagttatgatccggaccgc
cgcagtcttagattgcccactcgtcctgtcattaacactcctgtagtgagtgtggtggtc
cacaaggatggagaaccactcctcaccccactccaaagacccatcaccctgaacttcagg
ctcctggagacccacgaaaggaccaaacccgtgtgtgtctactggaaccactctatcctg
gtttctggtggaggcgcctggtcttctaaaggctgtgagctggtctttaggaactcgact
catatcagctgccagtgcaaccacatgaccagctttgctgtcctcatggacatctccaaa
cgagagcatggtgatgttcttcctctaaaagtggtgacctacacaacagtgtccgcttct
ctggtggccctcctcatcaccttcctcctgctggccattcttcgcaagctgcactccaac
ctacacagcatccacaagaacctggtggccgccatcttcctttctgagttcatcttcctc
actggcatcaatcagactgacagtccgtttgtatgtacagttgtggccattctgctacat
tattcgtacatgtgcgcatttgcctggatgtttgtggaggggctgcacatctatcgcatg
ctgaccgagatgcgtaacatcaaccagggccacatgcgcttctactacgccattggctgg
gggattcctgctattatcactggtctggctgtgggtttggatcctcaaggttatggaaac
ccagacttctgctggctctctgtttatgacactcttatctggagtatcacaggaccaatc
tctatagtagtgctgataaatacagtcctaattgtgctggcagccaaagccgcatgtgga
cggcgccagcgaacagaaaagtcaggagcaatctctgctcttcgagtggccttccttctt
ctgttgctcatcagcgccacctggctgctgggtctaatggcagtcaacagtgatgtgctg
tccttccactacctctttgctatcctcagctgcttacagggcatttgcatcttctttttc
cactgtattctcaacaaagatgtgaggaggaacctgaaaagtgtttttacagggaagaaa
gtaccagttgatgatcccagtacaacacgggcaaccttacttacacgttttctgaatggt
gacgtctacacggaggatggaggtctgtaccgaaccaccattggagagtcaactgtatct
ctagagagctctgttagatcaggcaagagtcacggcagcagctaccttgtttccaatctc
agggagaagaaacacagcatatcgtctaatggtggaaatgtagtgcataataaaggagac
tctttgctttttttccacaagagtaaaaaagcagaagactcagattcggacagtgagctc
tcagtggatgaacacagcagctcctacgcttcctctcactcctcggacagtgaggatgag
gccagacactcgaggaccaaatggaataatgagagaacgcccatccatagcactcctaaa
gttgatgccgtgtccagtcaagggaagccatactggccagaagagccacccacagccagt
gaaaacgaggagccgggtggtccagagaagctgcgggtagaaacaaaagtgaatgtggag
cttcatcaagggaataaattaaaccataatggagatgtgtctcaaagtgagagttctccc
agtcagccaaacagcaaccagttacccagaagaggcattttaaagaacaagatcacgtat
ccacccccactgacggacaagaacatgaagaaccgcttgagagagaagctcagcgactac
aacccaccccagatcccccgaaagactccatcgttggggtcaaacgagggcgttcgctca
ggaaccgaggccaacagcatcatcatcaaaccccctccattaccacctcaatctgcactg
aacgggatcaccgtagagctaggcacgagccccgtcaccctggcggatgaagacttcgat
tctgatggcagcaatgaaacatcaatctaa
DBGET
integrated database retrieval system
