Garra rufa (doctor fish): 141302138
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Entry
141302138 CDS
T11039
Symbol
scaper
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141302138 (scaper)
Cilium and associated proteins [BR:
grf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
141302138 (scaper)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
141302138
NCBI-ProteinID:
XP_073688429
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All DBs
Position
25:complement(27529758..27724114)
Genome browser
AA seq
1474 aa
AA seq
DB search
MSKDSRHDGRRRGAGQQHRLGLRSGQSGDGRDRSASNSSGSSHGGGKGRNTPINIALKAS
FQRSNSHDKVRKIVAEEGRAARNLIAWSVPVESKEEEAKSKNHGNSNARAQRINSGLHRN
KKQNSALDCKNAPGSILDKGPEKSPTKTRQPRKVDLRARYWAFLFDNLRRAVDEIYVTCE
SDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQNRPTSLAWEVRKMSPGRHV
MSSPSTDRIVPSPGVRRALNFGGPPPTLAVSRLSHTGPSWADRVKCSQSLPVHSPSVNIP
AEKPAKKDAEGWETVQRGRSMRPRSNTMVAKVSPVLAHVSPKDDSDKENQRIQPPPQEKS
QEVKEQEPPVPQEQTQETEKTSVIEPPAENIEEPGPSFSAPSEDKPPPTSDPTPPPTTPP
LPAQCPELDSDPDPPPPPITLSQPEEPGTGQAKAEQGMEGSVWKVAAPSAKAEAAVYIPL
AVMTLESMLDPTELSTPQSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIQAEN
KELETDNESDFSASIGSGSCGLNLDWSEMLADYDAREPWRQSTSWGDIVEEEPSRPPGHG
IHMHEKLSSPSRKRTIAESKKKHEEKQLKAQQLRDKLREEKTHKLQKLLEREKEVRKWKE
ELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLAK
LNEYEQRLNELQEERQRRQEEKQARDEAVQERKRVLEAERQARVEELLMKRREQEARIEQ
QRQEKERAREDAARERARDREERLAALSAAQQEAMEELQKKIQMKHDESSRRHMEQMEQR
KEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVVITSEVHLFSHIKGKRHQQAVRDSS
SIQGRELSDEEVEHLSLKKYIVDIVTDSSVPSDNAKEGEERQKARKKAKKLRARMNSRAK
EYETCMEAKTQTPDSPYKAKLQRLVKDLVKQQQGQDSGQWASNKVSGLDRTLGEISRILE
KQNNADQVAFQVGGGLTALEQILQVVTAASSPTAVPRIPLKSLCAAMNTYYLSCVHCHNN
CSYVLYSNKITFLMDLLLHQLTLFVPDEDKSIFGRSVNKQIFEGLTTGLLQTIATVLGQL
HPPNLDGDAPRICSPDAKSRPVASENFNTRAQDLISYVVNMGLIDKLYGCFLSIQGPIDE
SPKMAAFLEQATAFLHGMCKLCFAVTGRSLSIFDNKRQDPTGLTTLLQSTDLVGVLHMLY
CILLHSAPPDSLSGNPVGPLEPYSSGVIQVALQGLRFLNTFALLDLSAFQGVLGSEGLSL
AVRHIVSSLLWYCSQHSSEELLHELIICVGYFTVNHPDNQVIVQSGRQPSVLQKLCQLPF
QYFSHPRLIKVLFPSLICACYNNLPNKVILQQEMSCVLLATFIQDCATNENQSDSKASHP
EKGLAPLDYCELSNRFPRDQWDAALQFFLKKQEE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggacagccggcacgatggacgccggcgcggcgcgggtcagcagcaccggctc
gggctgaggtcgggtcagagcggggacggcagagacagatcggccagtaacagttctgga
tcatctcatggaggagggaaaggcaggaatacgcccatcaacatagccctaaaggcctcc
ttccagcggtccaacagccatgacaaggtgaggaagatcgtggcagaggaaggccgggct
gctcgaaatctcatcgcatggagtgtcccagtggagagcaaggaggaagaagctaaatcg
aagaatcacggtaacagcaatgcaagagctcaacgaatcaactccgggctccacaggaac
aaaaagcagaactcagcactggactgcaaaaatgcacctgggtcgatactggacaaagga
cctgagaagagccccaccaaaactagacagccacggaaggtggacctccgagcacgatac
tgggccttcctgttcgataatctacggagagcagtggatgagatctacgtcacctgtgaa
tctgaccagagcgtggtggagtgcaaggaggtgctgatgatgttggataactacgtccga
gacttcaaagctctaatcgactggatccaactacaagagaagctggaaaaaacagatgct
cagaacaggcccacgtctttggcttgggaagtccgaaagatgtcaccagggcgacatgta
atgtccagcccgtcgacagaccgtattgttccatcacctggcgttcgccgtgccctcaat
tttgggggtcctcctcccactctggctgtgtcccgtctctcccacactggaccaagctgg
gctgaccgagtcaagtgttcccagtccctgcctgtccacagcccaagtgtcaacatccct
gctgaaaaaccagcaaagaaagatgcagagggctgggagaccgtccagcgtggacgctcc
atgaggccacgctccaacaccatggtggccaaggtaagccccgttctggcccacgtaagc
cccaaagacgacagcgacaaggaaaaccagcgcatccagcctccaccccaggaaaaatct
caggaggtgaaggagcaagagccacccgtaccccaggagcaaacccaagagacggaaaag
acctccgtcatcgagcccccagcagaaaatattgaagagccagggccgagtttcagcgcc
ccctctgaggacaagccaccccccacctctgaccccacgccaccccctaccactccgcct
ttgccggctcagtgcccggaattggattccgatccagatcctcctcctcctcccataacc
ctttcccaaccagaggagccgggtactgggcaagccaaagcagagcaggggatggagggg
tcggtgtggaaggtcgcagcaccgtcggcaaaagcagaggcagcggtctacattcccctg
gcagtgatgacgctggagagcatgctggaccccacagaactttccacccctcaatccatg
gctgaagttttggctaagaaggaagagctggctgaccgcctggaaaaagctaacgaagag
gcaatcgcaagtgccatcgcagaggaggaacagctgacgagggagatccaagcggaaaac
aaagaactggagaccgacaacgagagtgacttctcggcaagcatcgggagtggaagttgt
ggcttgaatttagactggagcgagatgctagctgattatgacgctcgagagccctggcgt
cagagcacctcctggggtgacatagtggaggaggagccatcccgtccgccgggtcacggc
attcacatgcacgagaagctgtcctctccttcacgcaaacgaaccatcgcagagtccaag
aagaaacatgaagagaaacaactgaaagcccagcagctccgagacaaactgcgagaggaa
aagacccacaagctccagaaacttttggaaagggagaaggaggtgaggaaatggaaagag
gagctgttggatcagaggaggaggatgatggaggagaagctgcttcatgctgaattcaag
cgagagcttcaactccaggccatcgtgaagaaagcacaggaagaggaggcgaaggtgaat
gagattgctttcatcaacactttggaagcccagaacaagagacacgacgttctggcaaaa
ctaaacgaatatgaacaacgacttaatgagctgcaggaggaacgccagcgcagacaggaa
gaaaagcaagctagggatgaagccgttcaggagcgtaagagggttttagaggcggagcgg
caggcgcgggtggaggagcttctgatgaagagacgcgaacaagaggccagaattgagcaa
cagcggcaggagaaggagagggcgagggaagatgcagctcgggagagagccagggaccgt
gaggagcgtttggctgctctcagtgcggctcagcaggaagccatggaggaactacagaag
aaaatccagatgaagcatgacgagagtagccgcagacacatggagcagatggagcagagg
aaagaaaaggcagcggagctgagcagcggaagacacgccaacactgactacgcacccaaa
ctcacaccttatgaacggaagaagcaatgctcactctgtaacgttgtgatcacctctgag
gtccacctgttcagtcacattaaggggaagaggcaccagcaggcagtgcgggacagcagc
agtattcaagggcgggagctgtccgacgaggaggtggaacacctgtctctaaaaaagtac
atcgtagacatcgtgactgacagcagcgtgccctcagacaacgcgaaagagggagaagag
agacagaaagctcggaaaaaggccaagaaactgcgggcacgcatgaactcaagggctaag
gagtatgagacatgcatggaggccaagacccagacccccgactctccttacaaggccaag
cttcagcgtctggtgaaggatctggtaaagcagcagcaggggcaggacagcggccagtgg
gccagtaacaaagtgtctggcctggatagaaccctaggagaaatctcccgcattctggag
aaacagaataatgcagatcaggtagcttttcaagtaggagggggtttgaccgccctggaa
cagatcctacaggttgtcaccgcggcctccagtcccacagcagtcccccgtattcctctc
aagtctctctgcgctgccatgaacacgtattacctgtcctgcgtacactgccacaacaac
tgttcctatgttctctacagcaacaaaattacctttctcatggaccttctcctccatcag
ttaacactcttcgtgccagatgaggacaagtccatcttcggccgcagtgtcaataagcag
atctttgagggtttgactacaggacttctgcaaacaatcgccacagtgctggggcagttg
cacccccctaatttggatggagatgctccacgtatatgctctccggatgccaagagcaga
cctgttgccagtgagaacttcaacacacgtgctcaagatctcatcagctacgtggtgaac
atgggcttgatcgacaagctctacggatgtttcctgtccatacaaggaccgattgacgag
agtcccaagatggctgcctttctcgagcaagccacggctttcctccatgggatgtgcaag
ttgtgttttgctgtgactggccgttccctaagcatctttgacaacaaacgtcaggacccc
accggtttgacaaccctcctccagagcacagacctagtgggtgtcctccacatgctatac
tgcatcctgctccacagtgcccctcctgactccctctcaggcaaccccgtgggccccctg
gagccctacagctccggcgtcatccaggtggccctccagggtctgcgcttcctcaacacc
ttcgccctactggacctctcagccttccagggtgttttaggatcagagggtctgtctctg
gccgtcagacacattgtgagttctctgctttggtactgctctcaacacagctctgaagaa
cttctccacgagctcatcatctgcgttggctacttcactgtcaaccacccagacaaccag
gtgattgtgcagtctggccgccagcccagcgtgttgcagaaactgtgtcagctgccgttc
cagtatttcagccacccgcgactcatcaaagtgctcttcccctcactcatctgcgcctgc
tacaataacctgccgaacaaggtcatcctgcaacaggaaatgagctgtgtgctgttagcc
accttcatacaggactgtgccaccaatgagaaccagtcggacagtaaagcttcacatcca
gagaagggcttggctcctctggactactgcgagctctccaaccgcttccccagagaccag
tgggacgccgcacttcagttcttcctcaagaagcaggaggagtga
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