Garra rufa (doctor fish): 141305400
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Entry
141305400 CDS
T11039
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141305400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141305400
Spliceosome [BR:
grf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141305400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
141305400
NCBI-ProteinID:
XP_073688600
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHMEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRSLGFMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKGRPRKPPQKEEQDEEEAAAAAAAPADSG
RHGDRRRSRTPKRSPSPKSSQNRSRSRSHHREKQGASFDRELERERDRQRKEREGKDRDR
DRDRERERDRERDRDRRRSRTPDRTTERRRSRSRERRRSRSASREKRNERKDRDKEREAE
SERERSRRKDRDHHKDGERSKDKRSKGEGEERRHKEDKEDRKHREEKRSKRSRSRSRDRK
HKTERPSKKRSRSSSRSRQEAGEERNRKHSHSKERSHKRSRSKERLHRREPSNGREHVKQ
DRHSPEPGERTNSVRAESP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcaacaggccgtgagcaaaccggccggcgggaaa
cacggcaatgttttaccgttatggggcaacgagaagactatgaacctcaacccgatgatc
ctgacaaacgtcctgtcgtcgccctacttcaaggtccagctgtacgagctcaagacgtac
cacgaggtggtggacgagatatacttcaaggtcaaccatatggagccatgggaaaaaggc
agcaggaagactgcggggcagacgggaatgtgcggaggggttcgaggagtcgggaccggt
gggattgtgtccactgcgttttgcttgctgtataagctgtttacgctgaaactgacccgc
aaacaagtgatggggctcatcactcacacagattcgccctatattaggtcactgggcttc
atgtacatcaggtatactcaacctcctcctgacttggttgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggaggctgcgtaatgacgatcggagag
atgctccgctccttcctgaccaagctggaatggttctcaacattgttcccacgaatacct
gttcctgtgcagaaagcaatcgaccagcacatgaagggccgaccacgtaaacctccacaa
aaagaagagcaggatgaagaggaggcggcggcagcagcagcagcaccggccgattcggga
aggcatggagataggcgccgttccaggacacctaaaagaagtccaagtcccaaaagttcc
caaaatcgttcgcggagtcgcagccatcacagagaaaaacaaggcgccagcttcgaccgt
gaactggagagagaacgagaccggcagcgcaaagaacgagagggaaaggaccgggataga
gacagagatagagaaagagagagggacagggagagagacagagatagaagacgctccaga
acaccagaccgaaccacagaacgccgacgcagtcgcagcagggaacgacgccggagtcgc
agcgccagtcgagagaagcggaacgagaggaaagacagagataaagagagggaggcagag
agtgagagagagcgtagtcgcaggaaagacagagatcaccataaagatggggagaggtca
aaagacaagaggagtaaaggagaaggggaagaaaggaggcacaaagaagataaggaggat
aggaagcacagggaagaaaagaggagtaaacgttcaaggagcagaagcagagacaggaag
cacaaaaccgaacgacctagcaagaaacgttctcgctcgagcagcaggagcaggcaggaa
gcaggggaggagagaaacaggaaacacagccatagtaaggaacgctcacataaacgcagt
cggagcaaagagagattgcaccgtcgagaacccagcaatggaagagaacatgtaaaacaa
gatcgtcacagtcctgaaccaggagaaagaacaaacagtgttcgagcagagtctccttga
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