Garra rufa (doctor fish): 141315902
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Entry
141315902 CDS
T11039
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04136
Autophagy - other
grf04140
Autophagy - animal
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141315902
04136 Autophagy - other
141315902
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141315902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141315902
03029 Mitochondrial biogenesis [BR:
grf03029
]
141315902
Membrane trafficking [BR:
grf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
141315902
Others
Specific organelles associated proteins
Auto phagosome
141315902
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141315902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
ATG16
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_NWD2_C
eIF2A
Beta-prop_IFT140_1st
Beta-prop_VPS8
Tricorn_2nd
Ge1_WD40
Beta-prop_WDR41
Beta-prop_WDR19_1st
KASH_CCD
Beta-prop_DCAF12
Beta-prop_SPT8
Leu_zip
PUMA_CC
DUF6212
PspA_IM30
NET2A
FKBP15
Motif
Other DBs
NCBI-GeneID:
141315902
NCBI-ProteinID:
XP_073688842
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MAGRGVECLWKRHVVEQLKQRDRVQRQAFEEIIHQYNRLLEKSDLQVVFSERLQTDKYEQ
QNRHDLSPGVEGGRNDSLQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKE
IQSNEAKMLEYQQQISRLEGECRELRNSLADLERANQTLRDEYDALQITFSALEEKLRKT
TEENQELVTRWMAEKAQEANKLNAENEKDTRRRQAKLQKELADAAKEPLPIDPDDDIEVL
SEDLEKGKGETSPSRQISRTPSRRVSQPPPPPGLLDSISNIFGLSDSVQPGFVPSDSRRR
RSVNSFSSSPEAAEVPSGCADVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRV
KLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTG
HSGKVLSARFLLDNTRIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGH
FDKKVRFWDIRSESIVLELELQGRVTSLDLNHDRTELLTCSRDDLVKIIDLRSNAVRQTL
NAQGFKCGSDFTRVTFSPDGSYVAAGSADGVLYIWNVLTGKLDKSLDKGHSSAINSVSWS
PSGAYVASVGKGSKAVLWSDM
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgtggagtcgagtgtttgtggaaacgtcacgttgttgaacagctgaagcag
agagaccgagttcagcgtcaggcctttgaggagatcatacaccagtataaccggttatta
gagaagtctgatcttcaggttgttttttctgagcgtctccagaccgataaatatgagcaa
cagaacagacatgacctcagtccgggtgtcgagggtggccgcaatgattccctgcagcag
gaaatggctcagatgagaatcaagcatcaagaggagctgacggagctacacaagaaacga
ggagagttggctcagagtgtgattgaactaaacaaccagattcagcagaaagacaaagag
atccagagtaatgaagccaagatgttggagtatcagcagcagatctcccgtctggaaggc
gaatgtcgtgagctccgcaactctctggccgatctggaacgagccaatcagacgctgcga
gacgagtacgatgccctgcagatcacattcagtgccctggaggagaaactacggaaaacc
accgaggaaaatcaggagctggtgacacgctggatggctgagaaagcgcaggaggccaat
aaactcaatgctgagaacgagaaggacaccaggcgcagacaggcgaaactgcagaaggaa
ttggcagacgcagcgaaggaacctcttcctatagacccagatgatgacattgaagttctc
tcagaggatcttgagaagggaaagggtgaaacgtcaccaagcagacagatcagtcgcaca
cccagcagacgagtgtctcagcctcctcctcctcctggactgctggattccatctccaat
atctttggcttgtctgattctgtccaacctggtttcgtcccatctgactccagaagacgc
cgctctgtgaattcgttcagctcatctcctgaagccgcggaggtgccgtcggggtgcgct
gatgtccgagttccctccactgctctgcacatctttgacgcccatgatggagaagtgaac
gccgtgaggttcagtcccggttcccgtctgcttgccacgggaggaatggaccgcagagtg
aagctctgggaggtcgtttctgggcgatgtgaacctaaaggtgcgctgacgggcagtaat
gctggaatcaccagtatagagtttgatagtgcgggctcgtatctcctggctgcgtctaat
gattttgccagcagaatctggacggttgatgattacagactgcggcacacactcacagga
cacagcggaaaggtattatccgctcggtttctcctcgataacacacgaatcgtctccgga
agctacgatcgaaccctcaagctctgggacttgcgcagcaaagtctgcatgaagacggtg
tttgctggttctagctgtaatgacattgtctgcacggagcagtgtgtgatgagcggacac
tttgataagaaagttcgtttctgggacattaggtcggagagtatcgtgcttgagctggag
ttgcagggccgcgtaacatctttggacctcaatcacgaccggaccgagctcttgacctgc
tctcgtgacgacctggtgaaaataatcgatctgcgcagtaatgcagtgcgacagacgtta
aatgctcaaggattcaagtgtggttcagacttcaccagagtcacgtttagtcctgatgga
agttatgtggcggccggttctgcagacggcgttctgtacatttggaacgttctaacggga
aaactagacaaaagccttgataaaggtcacagttctgccataaattcggtatcctggtct
ccatccggtgcgtacgtggccagcgttggaaaaggcagcaaggccgtgctttggtctgac
atgtga
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integrated database retrieval system
