Garra rufa (doctor fish): 141316325
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Entry
141316325 CDS
T11039
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
grf04517
IgSF CAM signaling
grf04530
Tight junction
grf04810
Regulation of actin cytoskeleton
grf05100
Bacterial invasion of epithelial cells
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141316325 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141316325 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
141316325 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141316325 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141316325 (arpc1b)
05100 Bacterial invasion of epithelial cells
141316325 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141316325 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141316325 (arpc1b)
Membrane trafficking [BR:
grf04131
]
Others
Actin-binding proteins
Arp2/3 complex
141316325 (arpc1b)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
141316325 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
EIF3I
eIF2A
PEP5_VPS11_N
Rax2
WDR90_beta-prop_4th
RMC1_N
Tricorn_2nd
SH3_3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
141316325
NCBI-ProteinID:
XP_073688943
LinkDB
All DBs
Position
1:complement(32178707..32188781)
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKEGNNWNKIHVLKEHNGQVTGIDW
APDSNRIVTCGTDRNAYVWTLKGDTWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKFRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESAGTSGWVHGVCFSDSGNRVAWASHDSTVAVAEGGKTAVCASL
TSETLPLLCVTFITENSLVAAGHDCYPVLFVYDSNKAALSFGGKLDVPKQSAQKGMTARE
RFQNLDKKATTDSKEAVLESVHKNSISQISVLNGGKGQCAKFCTTGMDGGMAIWDVKSLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcacagttttcttcttgaacctatcagctgccatgcctggaacaaggaccga
actcaaattgcactgtgtcctaataaccatgaagtgcatatctacaagaaggaaggaaac
aactggaacaaaatccacgtgctgaaggagcacaatggccaggttactggaattgactgg
gccccagacagcaatcgcattgtgacctgcggcactgaccgtaacgcatatgtctggacc
ctaaagggagacacatggaagcccaccctggtcattttgaggatcaaccgtgctgcccgc
tgtgtaaaatggtctcctaaagaaaacaagtttgctgtgggcagtggctcacgtttgatc
tcagtctgctattttgagcaggaaaatgactggtgggtgtgcaagcacattaagaagccc
attcgctccaccattctttgtttggactggcaccccaacaatgtccttttggcagctgga
tcatgtgactttaaattcaggatcttttctgcttacataaaggaagtagaagagaagcct
gcaccaacaccatggggctctaaaatgccctttggagaggtcatgtttgaatctgccgga
acttcaggttgggtgcatggcgtctgtttttcggacagcgggaatcgtgtggcctgggcc
agccatgacagcaccgtggcagtggctgagggaggaaagactgctgtctgtgccagtctg
acttcagaaaccttgcctctcctgtgcgtgactttcattactgagaacagcctagtggca
gctggccatgactgctaccctgtgttgtttgtctacgattcgaacaaagcagccttgtct
tttggaggaaaactcgacgtgcccaaacagagtgctcagaagggcatgacagccagagaa
cgcttccagaacctggataagaaagccaccactgacagcaaagaagctgtactggagtct
gtgcacaagaacagcatcagccaaatctcagttcttaatgggggaaaaggacagtgtgcc
aaattctgcaccactggtatggatggaggcatggctatttgggatgtaaagagccttgaa
tctgcaatgaaggacctcaagattgtctag
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integrated database retrieval system
