Garra rufa (doctor fish): 141317142
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Entry
141317142 CDS
T11039
Symbol
ppl
Name
(RefSeq) periplakin isoform X1
KO
K10386
periplakin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141317142 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141317142 (ppl)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
141317142 (ppl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plectin_PPL
SR_desmoplakin_3
SH3_10
Plectin
SR_plectin_7
DUF8516
Spectrin_1st_PEPL
Spectrin
Motif
Other DBs
NCBI-GeneID:
141317142
NCBI-ProteinID:
XP_073689051
LinkDB
All DBs
Position
Unknown
AA seq
1657 aa
AA seq
DB search
MIEKDMKQLRVRVMKLREDHDRIYHITRSEQVPTVNWGKIIDEKLSNVNNKGYGQDLLTV
ENEVEEHNIFHSEVEALAPYVTGGRDGLDGQQAKYSKLLASSAARQKNLLSLRDYMQRCT
NELYWMEQQAEERIAYDWSDNNLDYPARKRQYENFISKCLESKEKGITQLNEDGEELMEQ
NHPGKNVIGAHMDAVHADWKEYLNLLICEENHLKNMDDYHKFHKDARDTGDLLKRLETEI
NQKYNPEFKDMYQMEGLIADLDDQSKAMDHYDERLKALQKRSLQVLPLKYRRETPQKLLP
IEALCEYETNEGSILRGERYTLLRNNGSKWDVKDGNGRTMSVPGVCFTIPPTDPEAVGVA
DNLINQQKGIKQKVASSKSGLQARLAELKKESTGGQDKQEQQCRQLMAGLDKVVSDLDKQ
EKAIYSRVRPPLEQTRPVQDSADRLQDIKDIASVVRKIEPEKSAKVQEAETFLRSSPKCA
SAPQLYSKVDEANKKYNKVDLLLNCADDKLQNSYRLENSLQNGKALLSTYENKLAREEVA
PSDPASMDKTQRELADFTSELRSKRSTITEAEQNLRDAKASCSNMATKVQEHCPDIERQE
ADVQKLTKRFDNLNRQVDARSQCLQRAKTAYANYHNDYDNLNSWLSRIPNYEPRETDDIR
QIDEKLRNQRNLLSDITRKESDLNNVSRNAQLYQQAVKDYENESERFKSILDLEDGLVPQ
TYKRSRLESPAMKVKREESAIDSKFTEVNAVNKQRLQNLEFAQSLLNQQPEVTMIQQNVQ
QVRSSAPGEEPWRIRKQLQEEIQRRDQLEREIQTVQSDIYLLEGQKPQDTIVKKELIKKV
HDPQLDEEYHRVQQKLLEESRTTRVLESELDTLRVKLRGIETEMKEGAQQYTVKEVLRIE
RDRGQEEELRRLREELEEVKRLKMVRENEITLIQKQVTVLAEEKSREQEIIREEEVIKVQ
NDPQLESEYRLLLDRKQKEIDGRKELEDELRFLQERLRRLEKEKAMAEEKISIKEVLKVE
KDIGLEREVENLRRQYEDEKTKRSSLLREKTDIHRKITSLEEEKSKVIVQEKVREIVRPD
PKAEAEVANLRLELVEQQRRCRDSELQLKTFQDELNMLRNRGPQIEYKEIIKEVIKYKTD
PETERELEKLRNEIVDKSHQTEKFEMEILQLKDEIQRWKDTKPQIQTKEVVNEVMQYRED
PKTKEEIESLKRKLAEEQRKRLDLENERASNEERIRIKKMDLSQVREKFVQQEVVKMEQD
PLLRSECDTFTQNINNEQRQRELLKEELMRLQHQKADLDIQLEELERERRARREAELEIQ
RLRVRLNELEIRDKENREKVTVKQKVVLQQDPQQEKEHSILRLQVEEERHKRMLLEKEFN
ALLQQQEILERTEVREKVVRTEKVQVERDPEAEMDIIRLKKSLEEEEKRRRELDQEIINL
NSKLSEMEFTNTKSSKELDYIRDESNRLQQENQRLQNELRKIHSEIEITSKETRHITQSS
PVENSRNLEIRMDSLQRELSDLKRIRMEKDEEIEKLQKSLSAMRVKREQRESHLRRSIVV
IDPDTGKEMKPEEAYKLGLIDWKMFVNLQSQECDWEEITVKGPSGESSVLHDRKSGKKFS
IEDALRAGNITNRQLQQYQNKEISIQEFGVMLSGRVI
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgattgagaaggatatgaaacagctgcgagtgcgtgtgatgaagctccgcgaggatcat
gaccgcatttaccacatcacacgatccgagcaggttcccactgtcaactggggaaaaata
attgatgagaaactgtcaaatgtgaacaacaaaggatacggacaagatctgctcaccgtt
gagaatgaagtggaggagcacaatatcttccacagtgaagtcgaggcactggctccgtat
gtcactggaggccgggatggtttggatggccagcaggcgaagtacagcaaactattggcg
agctctgctgcacgtcagaagaacctgctcagtctgagggactacatgcagcgctgcacc
aacgagctctactggatggaacagcaagctgaggagcgaatcgcatatgactggagcgac
aacaacctggactaccctgcccgaaagaggcagtacgagaacttcataagcaagtgtctg
gagtctaaggagaaaggcatcacccagctgaatgaagatggagaggaacttatggagcag
aaccatccagggaaaaatgtcattggggcacacatggatgcagtacatgcggattggaag
gaatacctcaacctgctcatctgtgaagagaaccacctcaagaacatggatgattatcac
aaattccacaaggacgcaagagacaccggcgacttgttgaagcgcctggaaaccgagatc
aaccagaagtacaaccctgagtttaaagacatgtaccagatggagggcctgattgctgac
ctggatgatcagtcaaaggccatggaccattacgacgagcgactgaaagctcttcagaag
cgcagcctgcaggtgctccctctgaagtaccgcagggagactcctcagaaactgctccct
atcgaggctctgtgtgaatacgagactaatgagggctcaattttgcgaggggagcgctac
accctgctcaggaacaatgggtccaaatgggacgtgaaggacggcaatggccgcaccatg
agtgttccaggagtgtgcttcacaatcccaccaaccgaccctgaggctgtgggcgttgct
gataatctaataaaccagcaaaaaggcatcaaacagaaagtggccagcagcaaatctgga
ctacaggcacgactggctgagctgaagaaggagagtacaggaggtcaagataaacaagag
cagcagtgccgtcagctgatggcaggactggataaagtggtcagtgatctggacaagcag
gaaaaggccatttactctcgtgtgcgccccccactggagcagactcgtcctgtgcaagac
agcgctgacaggctacaggacataaaggacattgcttctgttgttcgcaagatagagcca
gaaaagtctgcaaaagtacaggaggctgagactttcctcagatcctctcccaaatgtgca
agtgcaccacagctctactccaaggtggatgaggctaacaaaaaatacaataaggttgat
ttgctgttgaattgtgctgatgacaaactgcagaactcctatcgcctggagaattctctg
cagaatggcaaggctcttctgtccacctatgaaaacaaactggcacgagaggaggtcgct
ccatctgaccccgcctcaatggataagacccagcgtgagctagcggactttacatctgag
ctgaggagcaaaaggtctactatcacagaggctgagcagaacctgagagatgcaaaggcc
agctgcagcaacatggccaccaaagtgcaagaacattgccctgatatcgagaggcaggag
gctgatgttcagaaactcaccaagcgctttgacaacctgaacagacaggttgatgcaaga
tcacaatgtctgcaaagagccaaaactgcctatgccaactaccacaatgactatgacaac
ctcaatagctggctttctcgaattccgaactatgagccacgtgaaactgatgacatcaga
cagattgacgaaaaactgagaaatcaaagaaatctgctctctgacatcacgagaaaggaa
tcagacctgaacaacgtgtctagaaatgcccaactttaccagcaagcagtcaaggactat
gaaaatgaatccgagcggtttaaatccatccttgaccttgaagacggcttggttcctcag
acatacaaaagaagcagacttgaatctcctgccatgaaagtgaagagagaggaatctgcg
atcgactccaaattcactgaagtaaatgctgtgaacaagcagagactgcagaacctagag
tttgctcaaagccttcttaaccagcagccagaagttacaatgatccagcaaaatgtccag
caggtgagatcatcagccccaggagaagagccctggagaatcagaaaacagcttcaggaa
gaaattcagcgcagagaccaactggaaagagaaattcagactgtccagagtgacatctat
ttactggagggccagaaaccgcaggatacaatcgtcaagaaagagctcatcaagaaggtg
catgaccctcaacttgatgaagaatatcaccgggttcagcagaagctcttagaagaaagc
aggaccacccgtgtcttagagagcgaattggacaccctccgtgtaaagctgcgtgggatt
gagaccgaaatgaaagaaggagctcagcagtatactgtcaaagaggtactccgcattgag
agggaccggggacaggaggaagagctcaggaggctgagagaagagctagaggaggtcaag
aggctgaagatggtcagggagaatgaaatcactctgattcaaaagcaagtgactgttctt
gcagaggaaaaaagcagggagcaggaaatcatcagggaggaggaagtcattaaggttcaa
aatgaccctcaactggagagtgagtacagactattgcttgacaggaaacaaaaagagatc
gacggccgaaaagaactcgaagacgagcttcgattcctgcaggagaggctaaggcgtctt
gaaaaagaaaaggcaatggctgaggaaaagatctccatcaaagaagtcctgaaagttgag
aaagatattggcttggagagagaggtggagaacctgagaagacaatacgaagatgaaaaa
accaagcgcagctctttgctgagagagaaaacagacattcaccgcaagattaccagcctg
gaggaagagaagtccaaggtcatcgttcaggagaaagtgcgcgagattgtccgacctgat
ccgaaggcagaagcggaggtggcgaatcttcgacttgaactggtggagcagcagagaaga
tgcagagattcagagcttcagctgaagaccttccaggacgaactgaacatgcttagaaac
agaggcccacaaattgaatacaaggagatcatcaaagaggtcatcaaatacaagactgac
ccagagaccgaaagagagctggagaaactcaggaatgaaattgtggacaaatcccatcaa
acagagaagttcgagatggagatcctccaactcaaagatgagattcaaagatggaaagac
accaagcctcagattcagaccaaggaggttgtaaatgaggtcatgcaatacagagaagat
cccaaaaccaaggaggagattgagagtctcaagcgaaaacttgctgaggaacagaggaag
cgtttggacctggaaaacgaaagggcctccaatgaagaaaggattcgcattaagaagatg
gacttgtcacaagtgagggagaagtttgtccagcaagaagtagtgaagatggagcaggat
ccactcttgaggtctgagtgtgacactttcactcaaaatatcaacaatgagcagagacag
agagagctcttgaaagaagagctgatgagattgcagcatcaaaaggccgatttggacatt
cagcttgaggagctagaacgtgaacgcagagcccgcagagaagctgagcttgaaattcag
aggctgagagtgcggcttaatgaactagagatcagggacaaggaaaacagagaaaaggtc
acagtcaagcagaaggtcgtgctccagcaggaccctcagcaagaaaaagagcactctatc
ctacgccttcaggttgaagaggagaggcacaagcgtatgctcttggagaaggagtttaat
gcattgttgcaacagcaggaaattctcgagagaaccgaagtgcgtgaaaaggttgtgcga
accgaaaaagttcaagtcgagcgagacccagaagcagagatggacattatcaggctaaag
aaaagcctcgaagaagaggaaaagcgacgtcgtgagctggaccaagagattatcaaccta
aattcgaagctttcagagatggagttcaccaatacaaaatcatccaaagagctcgactac
attcgcgatgaaagcaacaggttacagcaggagaaccagcgcctgcagaacgaactaagg
aagattcattccgagatcgagatcacgtcaaaagaaaccagacacatcactcagtcttct
ccggtggagaacagcaggaacctggaaattcgcatggattccttgcaaagagaactctct
gaccttaagcgcatcagaatggagaaggacgaagaaattgaaaagctacagaagagtctg
tctgcaatgagagtgaagagggagcagcgagaaagccacctccgccgctctattgttgtc
atcgatccagacactggaaaggagatgaagcccgaggaggcttacaagctcggcctaatc
gactggaagatgttcgtcaaccttcagagtcaggagtgcgactgggaggagatcacagtc
aagggtcccagtggcgagtcctccgttcttcatgacagaaagtcgggcaagaagttctcc
attgaagatgctctgagggctggaaacatcacaaaccgtcagctgcaacaatatcagaac
aaagaaataagcatccaggagttcggtgtcatgctgtcaggcagagtcatataa
DBGET
integrated database retrieval system
