Garra rufa (doctor fish): 141317451
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Entry
141317451 CDS
T11039
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
grf04517
IgSF CAM signaling
grf04530
Tight junction
grf04810
Regulation of actin cytoskeleton
grf05100
Bacterial invasion of epithelial cells
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141317451 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141317451 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
141317451 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141317451 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141317451 (arpc1a)
05100 Bacterial invasion of epithelial cells
141317451 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141317451 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141317451 (arpc1a)
Membrane trafficking [BR:
grf04131
]
Others
Actin-binding proteins
Arp2/3 complex
141317451 (arpc1a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
141317451 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Rax2
EIF3I
RMC1_N
Beta-prop_SPT8
Beta-prop_EIPR1
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
141317451
NCBI-ProteinID:
XP_073689243
LinkDB
All DBs
Position
1:complement(32189148..32194967)
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AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKSRVFSAYIKEVDEKP
APTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTVSSTPS
QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFISKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaccagtttttgttggaacccatcacatgccatgcatggaaccgggacagg
acccaaattgctatcagtccaaacaatcacgaagtccatatatacaagaaaagtggaaat
cagtgggtgaaagctcacgaattaaaagaacacaatggacacatcacaggcattgattgg
gctcctaaaagcgatcgtattgtgacctgtggagctgaccgtaatgcttatgtgtggagt
caaaaggacggcgtgtggaaacccacccttgttattctcaggatcaaccgtgctgccacg
tttgtgaaatggtctccgctggagaacaagtttgcagtggggagtggagcgcgactcata
tctgtttgctactttgagtctgaaaatgattggtgggttagtaaacacatcaagaagccc
atccgttcgactgtcctcagtttagactggcatccaaataatgtgcttctggcagctggg
tcatgtgacttcaaaagcagggtattttctgcatacatcaaggaggtggatgagaaacca
gctccaaccccatgggggtccaagatgccctttgggcaggtgatggcagagttcggcggg
gcaggaagtggaggatgggtccacagtgtctgtttctcagctagtgggaacagattggct
tgggtcagccatgacagcactgtcactgtagtggaccccacagttagctcaacgccaagt
cagttgaagacagaattccttgcccttctgagtgtgacttttgtttctgagaacaacatt
gtggcagcaggtcacgattgctgccctatgctgttcagttttgatgatggtggaaccttg
accttcatatccaagttggacattccaaagcagagcattcagcgcaacatttccgccatg
gagcgcttccgcaacatggacaagagggccaccactgaggaccgcaatagcaccctagaa
accctgcatcagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaattgacggagcaatgaccatatgggatttcaagacctta
gagtcttcaatccaaggcctgcggatcatgtaa
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