Garra rufa (doctor fish): 141318056
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Entry
141318056 CDS
T11039
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 36-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141318056
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141318056
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141318056
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
141318056
Ubiquitin system [BR:
grf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
141318056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
141318056
NCBI-ProteinID:
XP_073689277
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All DBs
Position
1:59997729..60040002
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AA seq
1153 aa
AA seq
DB search
MPIVDKLKEALKPGRKDSSDEGDLNKLLASNAKKVLLQKIEFEPASKGFSYQLETLKTKY
VILNPKNDGAAAQRQTEPAQIKRQISESLSVGQSDGIPAPQKMLFPGNKLSMKWERVYRV
GAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSGFCMICVMQNHIIQAFAN
TGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTL
VHQIFGGYLRSRVKCTICKSVSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSGENAY
MCAKCKKKVPATKRFSVHRTSNVLTLSLKRFANFSGGKITKEVGYPEFLNIRPYMSQNTG
DPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFY
LRIPEKKNTEASNTKQNMVHSGRTNITSEQLKKSTLNGPLSSPQVTKKLDPAQLRKIQSV
DGGLGIPVARNCSGVQSPKMSNGTGNSHAPPKPPSGPTLIEEPFKKVKKPIPQPQSRSST
PAPTNGLPKHDNDKRSNSEGRGLPSSTSLKSLSDTSSADTSSESKDSIGTRSAPVGDMSR
VNGSASPAKSTERVNSEEQKVVKLKPQALTNVSSEPVSTMSPPPAKRLALSAKKASPRQS
LSSSTEAPSPSSHHLSSDPTHLLSRASTHPHHRFSTHSLNLQSPPLTPHPKVSSPLKWPS
STPEPHAHARSPQTNGIKPQPSSTPRPIQSQNPSTSTTGLPQVLASPTLKKKKKKLKRQH
SEVEQDAPKASPPEEEPMPSTENRKKKKKKKRKRELEANGLEGQRECVQSHLEPHQDEDW
CLGETWSVISEAKEKESSKAENRETKPQSVPPIGQPETDPVPKKKKKHKLKEQLEELSNG
VTASKCAVVKEVSSANGKTEYLAETKKKKKKKKHKDFEEQEERPRDKEKVHVELQETNGV
EPPSQMGKQKPSKSSTAAVIVWDSQVQDGFKRGQNHQEAEGDGKTKIFENPQKAAEGLMD
FGVTMEVPRKEPDWDSALRAVGWQSVRSRSKYAPAGEITASVESLRLSLDSYSKPTDDRE
PQPASHHQTEVLITSESELLVTSDQVREPATTPATREKAVDSEIAVRSSAHCTMAKGELI
VDLGLLEVEGPLI
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagttgacaagctcaaagaggccctgaagccgggccgcaaggactccagcgat
gagggcgacctgaacaagttgttggcttcaaacgcaaagaaagtgcttttacagaagatc
gagtttgaacctgccagcaaaggcttcagctaccagttggagaccctcaagacgaaatat
gtgatcctgaatcccaagaatgacggagcagcggcacagagacagactgaacctgctcag
attaagagacaaatctcagaaagcctgagcgttgggcagagcgatggcattcctgctccg
cagaagatgctcttccctgggaacaagctgtccatgaagtgggaacgggtgtatcgggtt
ggagccggcctccacaacctgggcaacacctgcttcctcaactccactgtgcagtgtctc
acctacaccccaccgctggccaactacctgctctcaaaggagcacagccgatcctgtcac
caatctggattctgcatgatttgtgtaatgcagaaccatatcatccaagcctttgccaac
acgggcaacgccatcaagcctgtatcgttcatccgagatctgaaaaaaattgctcgccat
tttcggtttgggagtcaagaggatgcccacgagtttctgcgttacaccattgatgccatg
cagaaagcttgtttgaatggatatcccaaattggacagacagacacaggccaccacgctc
gtccaccagatttttgggggttatctgaggtctagagtgaagtgcactatttgtaaaagc
gtgtcggatacgtatgacccatacctggacatcgctctggagattcggcaagcggccaac
atcgttcgtgctctggaactatttgtcaagtctgacgttttgagcggcgagaatgcctac
atgtgtgccaaatgtaagaagaaggttccagcgactaagaggttctcagttcacagaaca
tcaaatgtgctgacactgtcacttaaacgcttcgccaacttcagcggaggaaaaattacc
aaggaggttggctacccagagttcctgaacattcgtccgtacatgtcccagaacactgga
gatccagtcatgtatggtctttatgctgtccttgtgcactcagggtacagttgccatgct
ggacactactactgctatgtcaaggccagtaatggacagtggtaccagatgaatgactcc
atggtgcattccagcaacatcaaggttgtccttaatcagcaggcctatgtcctcttttac
ctgaggatccctgaaaagaaaaatacagaagcttcgaatactaagcagaacatggtgcac
tctgggagaactaatataacatcggagcagctgaagaagagcacactcaatggacctttg
tcttcaccacaggttacaaagaagcttgatccagctcagctgagaaaaatccagtctgtg
gatggaggtctcggtattccagtagctaggaactgttcaggggtccagtcgccgaagatg
tctaatggtacgggaaactcccatgccccgcccaagccgcccagtgggcccaccctgatc
gaggagccctttaagaaagtgaagaagcccatacctcagcctcagtcccgcagcagcact
cctgctccaaccaacggcctccccaaacatgacaacgacaagaggagcaacagcgagggc
cgcggcctgccatcatctacctcactcaaatccctgtctgacacctcctcagcagacacc
tcctctgagtctaaagattccattggcacgaggagcgcgcctgttggcgacatgtctagg
gtgaatggttctgcatctccagctaagagcacagagcgtgtgaactcagaggagcagaag
gtggtgaaactcaaaccccaggccctcaccaacgtttcatcagagcccgtcagcaccatg
tccccgccgcccgccaaacgactcgccctgtccgccaagaaggccagtccccggcagagc
ctgagcagcagcactgaggctccgtccccttcatctcatcatctgtccagtgatcccaca
caccttctcagccgggcctcaactcacccgcaccacagattttcaactcattcgctcaac
ctgcaatctccacctttaactcctcatcctaaagtttcaagtccccttaaatggccctcc
tcaactccggagccacacgctcatgctcgctctccacagaccaatggcattaagcctcag
ccgtctagtacacccagaccgatccagagccagaacccatcaacctcaactacaggatta
ccccaggtactcgccagtcccactctaaaaaagaagaaaaagaaactaaaacgacaacat
tcggaagtagaacaggacgcccctaaagcctcacccccagaagaagaaccaatgccaagt
actgaaaacagaaagaagaagaaaaagaagaagaggaaaagggaactagaggcaaacggt
cttgagggacagagggagtgtgtgcagtcccatctggagccacaccaggatgaggactgg
tgtcttggagaaacttggagcgtcatctcagaagccaaagaaaaggagtcatctaaagca
gagaatcgggagaccaaacctcagtcagtgcctccgattggccagccagagacagacccc
gtcccgaagaagaaaaagaagcacaaactcaaagagcagctggaagagcttagcaatgga
gtcacagcttcaaagtgtgctgttgtaaaagaggttagtagtgcaaacggaaagacagaa
tacctagcagagaccaagaagaaaaagaagaagaaaaaacacaaggacttcgaagaacag
gaggagagaccgagggataaagaaaaagttcacgtggagcttcaagagaccaatggagtc
gagcctcctagtcagatgggcaagcaaaaacctagtaaatcgagcacagctgcagtgatc
gtttgggacagccaggttcaggatggcttcaagcgaggccagaaccatcaagaagcagaa
ggtgatggaaagactaagattttcgaaaacccacaaaaagcagctgagggtttaatggac
tttggggtaacgatggaagttccaagaaaagagccggattgggactctgccttgcgggct
gtagggtggcagtccgtccgcagtaggagcaaatatgctcctgcaggggaaataacagct
agtgttgaatctcttcgactttccttggacagttattctaagcccactgatgacagagag
ccgcaaccggcgagccatcaccaaacagaggtgttgatcacctcggagtctgagctgcta
gtgacgtcagaccaggtgcgagagccagctacaacgcctgccactagggaaaaagctgtg
gacagtgaaattgcagtgaggagctctgcccactgcaccatggctaagggtgagcttatt
gtggatctgggactgttagaggttgaggggcctctgatatag
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