KEGG   Garra rufa (doctor fish): 141319687
Entry
141319687         CDS       T11039                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04137  Mitophagy - animal
grf04144  Endocytosis
grf04145  Phagosome
grf04148  Efferocytosis
grf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:grf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    141319687 (rab5c)
   04145 Phagosome
    141319687 (rab5c)
   04137 Mitophagy - animal
    141319687 (rab5c)
   04148 Efferocytosis
    141319687 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    141319687 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:grf04131]
    141319687 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141319687 (rab5c)
   04031 GTP-binding proteins [BR:grf04031]
    141319687 (rab5c)
Membrane trafficking [BR:grf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    141319687 (rab5c)
 Endosome - Lysosome transport
    141319687 (rab5c)
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141319687 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   141319687 (rab5c)
  Exosomal proteins of colorectal cancer cells
   141319687 (rab5c)
  Exosomal proteins of bladder cancer cells
   141319687 (rab5c)
GTP-binding proteins [BR:grf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    141319687 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 141319687
NCBI-ProteinID: XP_073689368
LinkDB
Position
1:complement(45452392..45471865)
AA seq 221 aa
MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGTGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggggcgaggtggaccagcgcggaccaacggtgccgcccccgtcgggaacaaaatc
tgccagttcaaactggtcttgctgggagagtctgccgtgggcaagtccagcctggtgctg
cgtttcgtcaaaggccagttccacgagtatcaggagagcaccattggagctgctttcctc
acacagacagtctgcctggatgatacaacagtaaagtttgagatttgggacacagccgga
caggagcgatatcacagcctggccccgatgtactatagaggagcccaggcagccatagtt
gtctatgacattactaacacagacacattcaccagagcaaagaactgggtgaaggagcta
cagcgtcaggcaagtccaaacatcgttattgctttggctggcaacaaggcagacctggcc
aacaagagagctgttgactttcaggaggcgcaggcatacgcagacgacaacagcctactc
ttcatggagacatctgcaaagaccgccatgaacgtgaacgagatcttcatggctatcgcc
aagaagcttccgaagaacgagccgcagggtggagcagggactggcggacgggccagagga
ggggtcgacttacaggagacagcacctcagggcagaagcggccagtgctgtggaggcggc
aactaa

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