Garra rufa (doctor fish): 141319687
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Entry
141319687 CDS
T11039
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
grf Garra rufa (doctor fish)
Pathway
grf04137
Mitophagy - animal
grf04144
Endocytosis
grf04145
Phagosome
grf04148
Efferocytosis
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141319687 (rab5c)
04145 Phagosome
141319687 (rab5c)
04137 Mitophagy - animal
141319687 (rab5c)
04148 Efferocytosis
141319687 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141319687 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141319687 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141319687 (rab5c)
04031 GTP-binding proteins [BR:
grf04031
]
141319687 (rab5c)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
141319687 (rab5c)
Endosome - Lysosome transport
141319687 (rab5c)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141319687 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
141319687 (rab5c)
Exosomal proteins of colorectal cancer cells
141319687 (rab5c)
Exosomal proteins of bladder cancer cells
141319687 (rab5c)
GTP-binding proteins [BR:
grf04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
141319687 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
MCR_beta
AAA_16
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
141319687
NCBI-ProteinID:
XP_073689368
LinkDB
All DBs
Position
1:complement(45452392..45471865)
Genome browser
AA seq
221 aa
AA seq
DB search
MAGRGGPARTNGAAPVGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGTGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgaggtggaccagcgcggaccaacggtgccgcccccgtcgggaacaaaatc
tgccagttcaaactggtcttgctgggagagtctgccgtgggcaagtccagcctggtgctg
cgtttcgtcaaaggccagttccacgagtatcaggagagcaccattggagctgctttcctc
acacagacagtctgcctggatgatacaacagtaaagtttgagatttgggacacagccgga
caggagcgatatcacagcctggccccgatgtactatagaggagcccaggcagccatagtt
gtctatgacattactaacacagacacattcaccagagcaaagaactgggtgaaggagcta
cagcgtcaggcaagtccaaacatcgttattgctttggctggcaacaaggcagacctggcc
aacaagagagctgttgactttcaggaggcgcaggcatacgcagacgacaacagcctactc
ttcatggagacatctgcaaagaccgccatgaacgtgaacgagatcttcatggctatcgcc
aagaagcttccgaagaacgagccgcagggtggagcagggactggcggacgggccagagga
ggggtcgacttacaggagacagcacctcagggcagaagcggccagtgctgtggaggcggc
aactaa
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