Garra rufa (doctor fish): 141322248
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Entry
141322248 CDS
T11039
Symbol
spop
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04340
Hedgehog signaling pathway
Brite
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
141322248 (spop)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
141322248
NCBI-ProteinID:
XP_073689519
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Position
1:complement(48046631..48154753)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMTSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEAEVFKEMMFFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtaccgagtccgccccctcctgcagaaatgaccagcggccctgtggccgaa
agctggtgttacacacagatcaaagtggttaagttctcctatatgtggaccatcaacaac
ttcagcttctgcagggaggagatgggcgaggtcatcaaaagctccaccttctcttcgggg
gccaatgacaagcttaaatggtgtttgcgagtgaatccaaaaggtctggatgaagagagt
aaagattatctgtcgctctatctgctcctggtcagctgtcctaagagtgaggttcgggcg
aaattcaagttctccattcttaatgccaagggagaggaaaccaaagctatggagagccag
cgggcttatcgcttcgtacaaggaaaagactgggggttcaagaagttcataaggcgagac
ttcctcctggatgaagccaacggcctgctgcctgatgacaaattgacactcttctgtgag
gtgagtgtggtgcaagactctgtgaacatctcgggtcagaacacgatgaacatggtaaag
gttcctgactgccggctggcagatgaactgggtggactgtgggaacattccaggttcacg
gactgctcgctgtgtgtcgccgggcaggagttccaggcacacaaagccatattggcagca
cgttccccagtattcagcgctatgtttgaacacgagatggaggagagtaaaaagaaccga
gttgagataaacgacgtggaggctgaggtctttaaagagatgatgttcttcatctacact
ggcaaagcacccaacctggacaaaatggctgatgacctgctcgctgctgctgacaagtat
gctctagagcggctgaaggtgatgtgcgaagatgctttgtgcaccagtctgtctgtggaa
aacgcagcggagattctgatcttggccgacctgcacagcgccgaccagctcaagacgcag
gctgtcgacttcatcaactaccatgcgtccgatgtgatggagacctcggggtggaagtca
atggtggcgtcccatcctcacctggttgccgaagcgtaccgctccctggcctccgcccag
tgccctttcctgggccctcctcgtaaacgcctcaaacagtcttag
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