KEGG   Garra rufa (doctor fish): 141324019
Entry
141324019         CDS       T11039                                 
Symbol
atf4b
Name
(RefSeq) activating transcription factor 4b
  KO
K04374  cyclic AMP-dependent transcription factor ATF-4
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04010  MAPK signaling pathway
grf04137  Mitophagy - animal
grf04141  Protein processing in endoplasmic reticulum
grf04210  Apoptosis
grf04261  Adrenergic signaling in cardiomyocytes
grf04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141324019 (atf4b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    141324019 (atf4b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    141324019 (atf4b)
  09143 Cell growth and death
   04210 Apoptosis
    141324019 (atf4b)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    141324019 (atf4b)
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    141324019 (atf4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:grf03000]
    141324019 (atf4b)
Transcription factors [BR:grf03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   AP-1(-like) components, CRE-BP/ATF
    141324019 (atf4b)
SSDB
Motif
Pfam: bZIP_1 bZIP_2
Other DBs
NCBI-GeneID: 141324019
NCBI-ProteinID: XP_073689615
LinkDB
Position
1:51361733..51365198
AA seq 421 aa
MSLMSSRFGPDDMEVLLWDPSSPMADPLGSFLDKDEEVLPLGGAESPLSSFSSSPLPSLS
PPCTPPSTQRGEKAGLNQMSLSWFPSDELCLDNRGTDSGNDHSFSEMDWMTERIDLSEFD
LESFISSYDSEDPPSSPEELIASLESQIDLESQPVASDSTPSPSPPVSVPEIDQVSNLSF
TLNTPLIPSTPCEVSDSSAVVPEPQAELEIKSEPASPVPSPSILPPESPTDTLELGCEVD
IAEVQSPTPVEVRVPKIVLSLSPTRIVLVLAPKEEANVMVTHPSEVVMDDSPSPTSPEPE
TPASPQSRSSRVKPYISPESKPTQNQSESPSLTGRVKTASGSKVVVEKKKMKKMEQNKTA
ATRYRQKKRAEQDALLSECTILEERNQELVEKAESLSKEILYLKELMDEVKRAREGRSTK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtctttgatgagctcacggtttggcccggacgatatggaagtccttctttgggaccca
tcatcaccgatggctgaccctctggggtccttcctagataaagatgaggaggttcttcct
ctcggaggcgcagaatcgcccctctcatctttctcttcctctccacttccctctctctcc
ccaccctgcactcctccctccactcagaggggggagaaggctgggctcaatcagatgtcc
ctgtcctggtttccctcagacgagctgtgcttagataatcgtggcacagacagtggtaat
gatcattcattcagtgaaatggattggatgaccgagcgcattgatctgagtgagttcgat
ctggagtctttcatcagctcctatgattctgaggatccacccagttcccctgaggagctc
attgcttctcttgagtcacagatagacctggagtcccagcctgtagcttctgacagtacc
ccttcgccctctcccccagtgtctgtccctgaaatcgatcaagtttccaacctttcattc
actttgaatactccactcattccttcaacaccttgtgaagtgtcagattcctccgccgta
gtccctgaaccccaggctgagctcgagatcaagtctgagccggcctccccagtcccatca
ccctccatcctcccacccgaatcccctactgacacgcttgagcttggttgcgaggttgac
atagctgaagttcagagtccaacccctgttgaggtgcgggtgcccaaaattgtcctatcc
ctctccccaacccgcatcgttcttgtccttgctcccaaagaggaggctaatgtgatggta
acccatccaagtgaggtggttatggatgattccccaagtccaacttcccctgaaccagaa
accccagcctctccccagtctcgatcttctagggtgaagccatatatttcacctgaatct
aagcccacccaaaatcagtcagagtcaccttccctcacaggaagagtgaagacagccagt
ggctcaaaggttgtggtcgagaagaaaaaaatgaagaaaatggagcagaacaagactgcg
gcaacccgctaccgacagaagaagcgtgcagagcaagacgccctcctgtcagagtgcaca
atcctagaggagaggaatcaagagctggtggaaaaagcagaatctctctctaaggagatt
ctgtatctgaaagagctcatggatgaagtcaagagggcaagagagggtaggagtacaaag
tcgtag

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