Garra rufa (doctor fish): 141325182
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Entry
141325182 CDS
T11039
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03430
Mismatch repair
grf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
141325182 (mlh1)
03460 Fanconi anemia pathway
141325182 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141325182 (mlh1)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
141325182 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
141325182
NCBI-ProteinID:
XP_073689810
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Position
2:complement(10781286..10792021)
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AA seq
723 aa
AA seq
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MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATSIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAK
CAYRANYCDGKLKAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAYKMK
GYISNANYSVKKCVLILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESIQKHVECKLLGSNSSRTYFTQTLLPGLSASTSATKASS
SSADTQERVYAHQMVRTDSKVQKLDAFLQPSASSSAAQSRSDKASSSFTATQGSAEPDDS
ELLTALDVVEPCDAEDQQTDSQPPPDEAPPRKRPHVDEVKEDLTAASLPRRRVIKLTSIK
ELRDDIEQETHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQALFYQILIYD
FGNFGVLRLSNPAPLYDLAMLALESEESGWTEEDGPKEGLAQYIVDFLKQKTEMLEEYFS
LEIDGEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDREKDCFHDFSMECSHFYSVR
KQYTLEPAADEPQEAEMSWQWKVEHVLFKALRTLFSPPKHFSEDGSILQIASLPELYKVF
ERC
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccgcagactcgatgagactgtagtgaaccgcatcgcagccggagag
atcatccagcggcctgccaatgcgatcaaggagatgatggagaactgtttggatgcaaaa
gccacaagtatccagataacagtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgagcgttttacaaccagc
aagcttcagacttttgaggacttgtcatcaatcgcaacatatggattcagaggagaggct
cttgcaagtataagtcatgtagcccatgttacaatcaccacaaaaacagctgatgcaaaa
tgtgcctacagagccaattactgtgatggaaagctgaaagctcctcctaaaccctgcgct
ggaaaccagggaacgttgatttctgtcgaggatctgttctataatgtgtctacccgacgg
aaagccctgaagagccccagtgaggaatattctagaatcgttgaggttgtaagcagatac
gccattcacaattctgggaaaagtttctctgtcaagaagcaaggtgagatggttgcagat
gttaagacccttcagaacgcctctgtgctggacaacattcgtgcggtgtttggtgtagct
gttagcagggagctgattgaagttgagtgtgaggatcagaaactcgcttataaaatgaaa
ggctacatctccaatgccaactactctgtcaagaaatgcgtccttatcctttttatcaac
catcgcttggtggagtctagtgccttgaagaaagcaattgagactgtctacactgcttat
ctacccaaaaacactcatccttttctttatcttagtttagagattgctcctcaaaacatt
gacgtgaatgttcacccaacgaagcacgaggtccatttcctgcatgaggacagcattatc
gagagcattcagaaacatgtcgagtgtaaactgcttggctccaactcctcacgcacatac
ttcacacagactctgcttccaggactttcggcatccaccagcgcaacaaaagcctctagt
tcctctgcagatacccaggagcgtgtatacgcccatcagatggttcgcactgacagcaaa
gtccagaagctggatgcgtttctccaaccttcagcttcgtcgtctgctgctcagagcagg
tcagataaagcctccagctctttcactgccactcagggttcagccgaaccagatgactca
gagctgctgactgctctggatgttgttgagccgtgtgacgcggaggatcaacagacagac
agtcaacctcctcctgatgaagcaccaccaaggaaaaggcctcatgtcgatgaggtgaag
gaggatttgacagccgcctccctgccgaggagacgcgtcattaaactgaccagcataaag
gagcttcgggatgacattgagcaagaaactcacaaaggtttacaggatctgctccagaat
cactcatttgtaggttcagtcaatccacagtggactctagtgcagcaccagaccaaactc
tacctgctcaatacaaccaaactcagtcaggcgctgttttatcaaattttgatctatgat
tttggtaacttcggggtccttcgattgtcgaatccagctccgctttatgatttggccatg
ctggctttggagtcggaggagagtgggtggacggaggaggatggtccaaaagaaggactg
gcccagtatatcgttgattttctgaagcagaaaacagagatgctggaagagtatttttct
ctggaaatagatggagaagggaacctgactggtctgccaatgctgcttgataattacact
cctgccatggagggacttcccatgttcattctgcgtttagccactgaggtgaactgggat
cgagagaaggactgttttcatgacttcagcatggaatgcagtcacttctattctgtaagg
aaacaatacacactggagccagctgcagacgagccacaggaagcagagatgagctggcag
tggaaagtagagcatgtgcttttcaaagcgctccgcactcttttcagtcctccaaaacac
ttcagtgaagacggcagcattctgcagattgccagcctgcctgaactctacaaagtgttt
gaaagatgctga
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