KEGG   Garra rufa (doctor fish): 141325182
Entry
141325182         CDS       T11039                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03430  Mismatch repair
grf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    141325182 (mlh1)
   03460 Fanconi anemia pathway
    141325182 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:grf03400]
    141325182 (mlh1)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     141325182 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 141325182
NCBI-ProteinID: XP_073689810
LinkDB
Position
2:complement(10781286..10792021)
AA seq 723 aa
MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATSIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTKTADAK
CAYRANYCDGKLKAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAYKMK
GYISNANYSVKKCVLILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESIQKHVECKLLGSNSSRTYFTQTLLPGLSASTSATKASS
SSADTQERVYAHQMVRTDSKVQKLDAFLQPSASSSAAQSRSDKASSSFTATQGSAEPDDS
ELLTALDVVEPCDAEDQQTDSQPPPDEAPPRKRPHVDEVKEDLTAASLPRRRVIKLTSIK
ELRDDIEQETHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQALFYQILIYD
FGNFGVLRLSNPAPLYDLAMLALESEESGWTEEDGPKEGLAQYIVDFLKQKTEMLEEYFS
LEIDGEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDREKDCFHDFSMECSHFYSVR
KQYTLEPAADEPQEAEMSWQWKVEHVLFKALRTLFSPPKHFSEDGSILQIASLPELYKVF
ERC
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcgggagtcatccgcagactcgatgagactgtagtgaaccgcatcgcagccggagag
atcatccagcggcctgccaatgcgatcaaggagatgatggagaactgtttggatgcaaaa
gccacaagtatccagataacagtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgagcgttttacaaccagc
aagcttcagacttttgaggacttgtcatcaatcgcaacatatggattcagaggagaggct
cttgcaagtataagtcatgtagcccatgttacaatcaccacaaaaacagctgatgcaaaa
tgtgcctacagagccaattactgtgatggaaagctgaaagctcctcctaaaccctgcgct
ggaaaccagggaacgttgatttctgtcgaggatctgttctataatgtgtctacccgacgg
aaagccctgaagagccccagtgaggaatattctagaatcgttgaggttgtaagcagatac
gccattcacaattctgggaaaagtttctctgtcaagaagcaaggtgagatggttgcagat
gttaagacccttcagaacgcctctgtgctggacaacattcgtgcggtgtttggtgtagct
gttagcagggagctgattgaagttgagtgtgaggatcagaaactcgcttataaaatgaaa
ggctacatctccaatgccaactactctgtcaagaaatgcgtccttatcctttttatcaac
catcgcttggtggagtctagtgccttgaagaaagcaattgagactgtctacactgcttat
ctacccaaaaacactcatccttttctttatcttagtttagagattgctcctcaaaacatt
gacgtgaatgttcacccaacgaagcacgaggtccatttcctgcatgaggacagcattatc
gagagcattcagaaacatgtcgagtgtaaactgcttggctccaactcctcacgcacatac
ttcacacagactctgcttccaggactttcggcatccaccagcgcaacaaaagcctctagt
tcctctgcagatacccaggagcgtgtatacgcccatcagatggttcgcactgacagcaaa
gtccagaagctggatgcgtttctccaaccttcagcttcgtcgtctgctgctcagagcagg
tcagataaagcctccagctctttcactgccactcagggttcagccgaaccagatgactca
gagctgctgactgctctggatgttgttgagccgtgtgacgcggaggatcaacagacagac
agtcaacctcctcctgatgaagcaccaccaaggaaaaggcctcatgtcgatgaggtgaag
gaggatttgacagccgcctccctgccgaggagacgcgtcattaaactgaccagcataaag
gagcttcgggatgacattgagcaagaaactcacaaaggtttacaggatctgctccagaat
cactcatttgtaggttcagtcaatccacagtggactctagtgcagcaccagaccaaactc
tacctgctcaatacaaccaaactcagtcaggcgctgttttatcaaattttgatctatgat
tttggtaacttcggggtccttcgattgtcgaatccagctccgctttatgatttggccatg
ctggctttggagtcggaggagagtgggtggacggaggaggatggtccaaaagaaggactg
gcccagtatatcgttgattttctgaagcagaaaacagagatgctggaagagtatttttct
ctggaaatagatggagaagggaacctgactggtctgccaatgctgcttgataattacact
cctgccatggagggacttcccatgttcattctgcgtttagccactgaggtgaactgggat
cgagagaaggactgttttcatgacttcagcatggaatgcagtcacttctattctgtaagg
aaacaatacacactggagccagctgcagacgagccacaggaagcagagatgagctggcag
tggaaagtagagcatgtgcttttcaaagcgctccgcactcttttcagtcctccaaaacac
ttcagtgaagacggcagcattctgcagattgccagcctgcctgaactctacaaagtgttt
gaaagatgctga

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