Garra rufa (doctor fish): 141325213
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Entry
141325213 CDS
T11039
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141325213 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141325213 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141325213 (srsf5a)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141325213 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
DUF4090
OB_RNB
Motif
Other DBs
NCBI-GeneID:
141325213
NCBI-ProteinID:
XP_073689867
LinkDB
All DBs
Position
2:15724220..15730810
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AA seq
261 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGRFSPRFGGYRKSRSGGSRYGPPVRTEHRIIVEN
LSSRISWQDLKDLMRKVGEVTFVDAHRTKKNEGVVEFASHSDMKNAIDKLDGTDLNGRKL
KLYEDRKRDRSRSRSRSRSSSRSRSPSRSRTPERGSKRSRSRSLSRTPEKKTNSNRSPSR
SPSPPPRKQSRSRSASVESQH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgcgtgttcatcggccgtctgagccctcatgctcgtgaaagagatgta
gagaagttcttcaaaggctacggacgcattcgggagattaacctgaaaaacgggtttggc
tttgtggagtttgacgaccacagggacgcagatgatgcagtgtatgagctgaatggaaaa
gagttgtgcagtgagagggtgaccattgaacatgcccgctctcgccgaggaagaggtgga
ggcccaggaatgggaggaggacgcttctctccacgctttggagggtatcgtaaatcccgc
agtgggggttccaggtatggaccaccagtgcgcacggagcacagaatcattgtggagaat
ctctcctctcgcatcagctggcaggatctgaaggacttgatgaggaaggtgggtgaagtg
acctttgtggacgcacacaggaccaagaagaacgaaggggtggtggagtttgcttcacac
agtgacatgaagaatgccattgacaagctggatggaacagatctgaatggacgcaaactc
aagctctatgaggatcgcaagagggatcgtagtaggagtcgttcccgcagcaggagcagc
tcccgttcccgctcacccagtcggagtcgcacccccgagcgcggaagcaagcgctctcgc
agtcgctcgctcagtcgcaccccagagaagaaaactaacagcaaccggtctccttcccgc
tctccttctcctcctcctaggaaacagagccgctcccgatctgcatctgtagagagtcag
cactga
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integrated database retrieval system
