Garra rufa (doctor fish): 141325236
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Entry
141325236 CDS
T11039
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141325236 (trip11)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
141325236 (trip11)
Retrieval pathways
141325236 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Taxilin
TMF_DNA_bd
ZapB
DUF6317
SlyX
Motif
Other DBs
NCBI-GeneID:
141325236
NCBI-ProteinID:
XP_073689902
LinkDB
All DBs
Position
2:18444773..18473985
Genome browser
AA seq
1984 aa
AA seq
DB search
MSSWLGGIGSGLGQSLGQVGGSLSTFTGQISNFTKDILLESAEEVDATSELQVSNSRLHE
LETLYATQKSEYERLRRINSELEEKLEAAEIQVKQQSVEYRTLLQQKEVEISHLKARQSG
LQDEVQKLQHSAQASASPSSSAAVLPVTTAATTTTSSSFLHRSSAVHQGFHGDEVDLSDV
LWSQQEINRLSNEVHRLESEVAHWRRVAQASKPGVDGNGDQGEVLKMQRMIKELREEMAR
EVDEHQHELTALQDAQRQKMAEISKRHREELAEYEERIEELEEQLQTEGGNVVQKSTTVQ
DSAKLQELQSTIETLQEEAELQRKQHRDLLASLEEAEQQKAKLEREKEEATAENTELLQN
YSRLQKSVNELQARVQEQEGKSMLKAQHDSEIQTLKKALAGAEKEMARLRTLSESSHTEE
VEHADILELNTIIDTLRKEKEDVEREKLALVERLTLAEERHKAGESESAVELSQEVSDLQ
SQLHQREQALKQANLDIETLSAELEELDKQNQEATQHLIAVKEQLSLQKTQADAEKASLQ
SDLNSSLDQRQTLQLELEAQGEKLSQSAFSLNELHMTKQQLESTLKELREKLCKSQDMGK
ELRQESSDLKRALQERDTELTALRKKLSHSGEKGNELEEHRKELETRDKEIQDLRTELTE
VKKSYEKAVSEDFELKIENRKLKEESTQALEKIDSLEKQIQDGQASISRMSLEKDTRIEA
WKLEKSQLESELNQTEKRLSDQAKQYQQTIDELTRARSMDASALQTEHERMVKLNQEKDL
TIAELRREMEQMVSDHKDTSEMLDITVAGQNQLTELLQEKDTFAETLKAQAAETQQELEY
KISGATKECDSLRRSVEEKDKQLGAMKEENSHLKEEIDRLRDQQSRPQLLSEPRTLDIIT
ELETEVNQLKAARDQLEEEVQSLRRLSEEHQTTALQSQRSLQVLQSELEQARTRHEQSSL
NYERLITAKDEEIAQLQSEVEGLSTQGQSQIQSVEILQEDKTQSLNGENGNEKHDFSKVE
IDKLVKGIKEKETEINQLNEKNLSLTKQLDQLVVSQNELGKLSQMVLQKDLEIQALHARV
SGGHGQDVMFLQQQLQAYAVEREQVLAVLNEKTRENSQLRSDYHRIMDIVAAKEAALLKL
QQENQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVSVLQTSGAGDS
VSGGSGGVSSNQFEELLQERDNLKQQVKKMEEWKQQVITTVRNMQHESAQLQEELLKLQG
QVCADSDCSSKLSVDYSRLIQSYEQKEKKLGFLSQELAQVQQTISQLSSTKDVLLGKLGS
VKQSPEASAPMGIQAFAPPNLKGAAPPGQDESLHQEFQTMQRVLAEKESMIRTLQENNHR
LSNSASLSESDQRSHAEQLKQAREKQESLQRSLREKDLLIKTKGDQLSQVSESLRNREND
NEVLKQAVTNLKERALILELDVKKLKEENEAIAGKAREKETEFRALQETNMQVSLLLRER
EFQFSAVNEKASAMEKMLKDKEQGKSGELNQLLNEVRSMQEKAVLFQQERDQVMMALKQK
QMETTALQSELQHTRDKEQRLKQEVERLRNHLLEIEDSYTREALAAEDREGELRRRVALL
DERLTSSSNAVESASQQASLQVESLQEQLNGAVRQRDEALIQLRAAQDQVNQYAVSLSNL
QMVLEQFQQEEKAMYSAELEKHKREKGEWRTKAENLQDQAAALQINLDEANAALESASRL
TDQLDLKEEQIEDLKKQVDVRQEMLEEAQRKLMNLLNSTEGKVDKVLMKNLYLGYFHTPR
NKRCEVLRLMGNVLGLDRDEITELLQEEGKSGMTGWVSSWLGGRAVQSVPNTPQRPTHAQ
NLNSSFSEMFVKFLEVESTPALPAPKLPVYDIKPLSAPPPGRSTASTPASGVSGSGKRTG
DSNPFLAPRSAAVPLLNPAGAGSTAGTGGHLLMKPISDALPTFTPVPVSAEASGGAVLKD
LLKQ
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctggctgggagggataggctctggcctgggtcagagtttaggtcaggtcggt
ggaagcttgtctacttttactggccagatctctaattttaccaaagatattctactggaa
agcgccgaggaagtagatgccacctctgagctgcaggtgtccaactctagattgcatgaa
ctggaaactttatatgcaacacaaaagtctgagtatgagcgcttgcggagaataaactct
gagctggaggagaagctagaggcggcagagattcaggtcaaacaacagtcagtggaatac
agaaccctcctgcaacagaaagaggtggagatcagtcacctcaaggcccgtcagagtggt
ttgcaagatgaggttcagaaactccaacattctgctcaggcttcagccagcccatcctcc
tctgctgctgtacttcctgttaccactgctgccactaccactacatcgtcttcctttctg
caccggtcttcagctgtccaccaaggcttccatggtgatgaggtggacctcagtgatgtc
ctgtggtcacagcaggaaattaaccgtctttccaatgaggtgcatcgtctagagtctgaa
gtagctcactggagaagagttgctcaggcatccaagccaggagttgatggtaacggagac
cagggtgaagttctgaaaatgcaaagaatgatcaaggagctgagagaggaaatggcacgg
gaagtggatgagcaccagcatgaactgacagcactgcaggatgcccagaggcagaaaatg
gctgaaatctcaaaaaggcacagagaagagctggcagagtatgaggagagaatcgaggag
cttgaggagcagcttcaaactgaaggtggaaatgtagtccaaaaatcaaccacagtacag
gactccgccaaacttcaggagttgcagtcgaccatagagactttacaggaggaggcagag
cttcagcgcaaacagcacagagatctactggccagtttggaagaggcagagcaacaaaag
gccaagctagagagggaaaaggaggaggctacagcagaaaatacagaattgttgcagaat
tacagccgccttcagaagtctgtaaatgaactccaggctcgggtacaggaacaggaaggg
aagtctatgctgaaagcccagcatgacagtgagatacaaactctgaaaaaagctctggca
ggtgcagagaaagagatggctagattaaggactctcagtgagagcagtcatacagaagaa
gtagaacatgctgacatcctggagctcaacaccatcattgataccctcaggaaagagaag
gaagatgtggagagagaaaagcttgcattagttgagagactgactctggccgaggagaga
cacaaggctggagagtcggaaagtgctgtggaactgtcacaagaagtttcagacctacag
agccagctacaccaacgggagcaagcactaaagcaagccaatcttgatatagaaacactc
agtgctgaactggaagaactggacaagcagaaccaggaggccacacagcatcttattgca
gtgaaggaacagctgtccctgcagaaaacccaggctgatgcagaaaaagctagtcttcag
tcagatcttaactcatctcttgaccagagacagactcttcaactggagctggaagctcaa
ggggagaagctaagtcaaagtgccttctctttgaatgaactgcacatgacaaagcagcaa
ctggaatccacactaaaggagttgagagagaagttatgcaagtcacaggatatgggcaaa
gaactgcggcaagagtcctctgaccttaagagggcacttcaggagagagatacagaactt
actgcacttcgtaagaagttaagtcattctggagagaaagggaatgagttagaggaacac
aggaaggaacttgagacaagggataaagagatccaggacttgagaacagagttaacagaa
gtgaagaaatcctacgagaaggccgtttcggaggattttgaattgaaaattgaaaataga
aagttaaaagaagaaagcactcaggctttggagaagattgacagtttggaaaagcagatt
caagatggtcaagcctctataagtaggatgtccctggagaaagacacccgcattgaagcc
tggaaactagagaagagccagttagaatctgagctaaatcaaaccgagaagcgactatca
gatcaggccaaacagtatcaacaaaccattgatgaactgaccagagcacgctctatggat
gcgtctgcactgcagactgaacatgagcgaatggtgaaactgaatcaggaaaaagatctg
acaattgcagagctcaggcgtgagatggagcagatggtctctgaccacaaagacaccagt
gagatgctggacatcactgtggcaggccaaaatcagctcaccgagcttctgcaggagaag
gacacctttgccgaaactctaaaagctcaagctgcggaaacacaacaggaattagagtac
aagatctcgggagcaactaaagagtgtgactctctgagaaggtcagtggaggagaaggac
aaacagctcggagccatgaaggaagaaaacagccacctaaaagaagagattgaccgtctg
agggatcagcaaagcagaccgcagttattgtcagagccacggacactggacatcatcaca
gagcttgagactgaggtcaatcagctcaaagctgccagagatcaactcgaagaagaggtc
caatctctgaggaggttatcagaggagcatcagaccacagcgctgcagtcccaacgttct
ctgcaggtgctacagagtgaactagagcaagcacggacaagacatgaacaaagctcactc
aattacgaaagactcatcactgctaaagatgaggagattgcccagcttcagtcagaagtg
gaaggcctgagcacacaagggcagagtcaaatacagtccgtagaaatcctacaagaggac
aagacccagtcgctgaatggcgaaaacggtaatgagaagcatgacttttcgaaggtggag
atcgataaacttgtgaaaggcatcaaggagaaggagactgagattaaccagctaaatgag
aagaacctgtctttaaccaagcagcttgaccaacttgtggtctctcaaaatgagcttgga
aaactctcgcagatggtgcttcagaaagatctagaaatccaggcgctccacgctcgagtg
tctggtggccacggtcaagatgtgatgttcctgcagcagcagttgcaggcgtatgcggtg
gaacgtgaacaggtgttggccgtactcaacgagaaaaccagagaaaacagccaactgcgt
tcggactatcatcgcataatggacattgtcgcagccaaggaagccgccttgttgaagctc
cagcaagagaaccagcggctttccactatgagcgacccttcaggcagtcaagagatgttt
cgagagaccattcagaacctctcgcgcatcattcgtgagaaggatatcgagattgatgcc
ttgacgcagaaatgtcagaccctggtttctgtcctccagacatctggtgccggcgattct
gttagcggtggctcaggaggtgttagcagcaaccagtttgaggagctcctacaagagcgg
gacaatctcaaacagcaagtgaagaagatggaagagtggaagcagcaggtgatcacaact
gtgaggaacatgcagcatgaatctgctcagctacaagaggagctgctcaagcttcagggt
caggtttgtgcagatagcgactgcagttcaaagctctcggtggattactccagacttatt
cagagctatgagcagaaagagaaaaagctgggatttttgagtcaagagctagcacaggtg
cagcagaccatcagccagctgagcagtaccaaagatgtcctgcttgggaagcttggcagt
gttaagcaatctcctgaagcttctgctccgatgggtatccaggcttttgcccctccaaac
ctcaaaggggcagcaccaccaggccaagatgagagcctgcatcaggagtttcagacaatg
cagagagttttagcagagaaggagagcatgataagaactctgcaggaaaacaatcatcgc
ttgtcaaattctgcatctctgtctgaaagtgaccagagaagccatgcagagcagctcaag
caagccagagagaagcaggaatcgctacagcgctccctcagagagaaagacctgcttatt
aagaccaagggagaccaacttagtcaggttagtgaaagtttacgtaatcgtgaaaacgac
aacgaggtcttgaagcaggctgtgacgaacctgaaggagcgtgcgctgatcctggaactt
gatgtgaagaagctaaaggaggagaatgaagcgatagcaggaaaagctcgtgagaaagag
acagagttccgtgccctgcaggagacaaacatgcaggtgtcactgctgcttcgggaacgg
gagtttcagttcagtgccgtgaatgagaaggccagtgccatggagaagatgctaaaagat
aaagagcagggtaaatctggtgagctgaaccaactgttgaatgaagttaggtcaatgcag
gagaaggcagtgttgttccagcaggaaagagatcaagtgatgatggccctcaaacaaaaa
caaatggagacaaccgcacttcagagtgagctacaacacactcgagataaagagcagcgc
ctgaagcaggaggtggagcgtttgcgcaatcacctgttagaaattgaggattcgtacaca
cgtgaggctttggcagccgaggacagagaaggagagctgagacgcagagtggcactccta
gatgagcggttaacgtcttcctccaatgctgtggaaagcgcaagtcaacaggctagcctg
caggttgagtctcttcaagagcagctgaatggtgccgtcagacagagagatgaagcactt
attcagctccgtgctgctcaggatcaggtcaaccagtatgcagtgtcactctctaacctc
cagatggtgctagaacagtttcaacaagaagaaaaagccatgtactcagcagaactggaa
aaacacaagagagagaaaggagagtggagaactaaagcagaaaatcttcaggatcaggcg
gctgctctgcaaataaacctggatgaagcaaacgcagctctagaatctgcctcccgcctc
actgaccagctggacctcaaagaggaacagatagaagatctgaagaaacaagtggatgtg
agacaggagatgttggaagaggctcagagaaaactgatgaacctcctaaacagcaccgaa
ggcaaagtggataaggttctgatgaagaatctttacctgggctattttcatactccccga
aacaagcgctgtgaggtgctgaggctcatgggtaatgtgcttgggttggaccgagatgag
attacagagttgttacaggaagagggcaagagcgggatgaccggatgggtctcgagttgg
ctgggaggccgagctgttcagagtgtacccaacactccccaaagacctacacatgcacag
aacctcaattcgtccttttctgagatgtttgtgaagttcctggaggtggagtctactcca
gcacttcctgcccctaaattgcctgtctatgatatcaagcctctgagtgcacccccacct
ggccggagtactgcaagcacacctgcatcaggtgtctcaggctcaggtaagcgcaccggg
gattcaaaccccttcctggcgccccggtctgcagccgtacccctcctcaatcccgcaggt
gcaggcagcactgcaggtactgggggccacctgcttatgaagcccatctcagacgccctg
cccacctttacacctgtacctgtgtcggctgaagccagcggtggggccgtgttgaaagat
ttgctcaagcagtga
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integrated database retrieval system
