Garra rufa (doctor fish): 141325289
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Entry
141325289 CDS
T11039
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141325289 (rtn1a)
03036 Chromosome and associated proteins [BR:
grf03036
]
141325289 (rtn1a)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
141325289 (rtn1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141325289 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
141325289
NCBI-ProteinID:
XP_073689980
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Position
2:21478880..21513475
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AA seq
818 aa
AA seq
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MSANSNEGPGLDGKWFEEEEEKNGMFGSAGPRFDEMRDDLHAPKQQFHPFEGSGVAMETA
STGDSLSDMFMNSSPGDGDLYTSLLSSKSSSNPFNDGASLFSSEGNRSPPAPTGTDSGIG
MTPGDPSDHQTTLQGSHKTDHYSYMDMGDDLCDFGSMGNAKNKQQPPMSGYGDDEDDDED
EEDDIQDFKPKIHEKENKESSHDPFDLGRYLEKSPLGSETTEVKSQGSAGGQHAFPYVED
PSDEEMADYRSYRRMETPQSASPVKITVTAESQPVRVSPQGGMSERESVLSFGQQGLPTV
TLSEPEDDSAASSANHSPNHSPTGRESPSDVLFQPAGMKSVSSTQDSSSIISHPSIPEVQ
DIKSSPKPSSPWAQDLQASGDESGDSEIEQVAEESDSPIHDLTSKTPPAKGGFGQASNPF
EQTSYTTATDKASNPFDKPQTNKVSASNPFELSGNIKGGFGQSSNPPLYSLLREEREAEL
DSDLLIESASEESPKREQEYSAQKPPEISSPLTTAVTSTKPITTPSPTASPFTSPPASTL
IETEKEKEKEKEKEKEKAAPVEKPKPQPEDSWSTKPRPAVMGTSTVTPEKHSSQEQENKS
KSSVVSSTTEKDADLSLLLQSINRQKVMGGSVVDLLHWRDMKQSGLVFGSVLLLLFSLTQ
FSVVSVIAYLALAVLSATISFRVYKSVLQAVQKTDEGHPFKAYLEVEIALSADQISKYVD
KTQLYINSTMKELRRLFLVQDLVDSIKFAVLMWLLTYVGALFNGLTLMILVVVSMFTMPL
VYEKYQTQIDQYLGLVRTQVNSIMGKIREKVPGAKKKE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaattcgaacgaggggccgggtttggatgggaaatggttcgaggaggaggaa
gagaagaacgggatgtttgggagcgcagggccccgtttcgacgagatgcgggacgatctg
cacgcgcccaagcaacaattccatccctttgaaggaagcggcgttgccatggaaactgca
tctacaggtgactctctgtctgacatgtttatgaattcatcaccaggagatggtgatctg
tacacctctctcctttcctcaaaatcctcctccaatcctttcaatgatggtgcctctctc
ttctcctctgagggcaaccgttctccacctgctcccaccgggacagactccggcattggc
atgaccccaggtgacccctcagaccatcagacgaccctgcagggctcacacaagactgac
cattacagctacatggacatgggggatgacctctgtgatttcggtagtatgggcaatgcc
aagaacaagcagcagcctcccatgtctggttatggagatgacgaagatgatgatgaagat
gaagaagatgacattcaggatttcaagcctaagattcacgaaaaggaaaataaagaatcc
agccatgaccccttcgacctaggtcgctatttagagaagagtcctcttgggtctgaaact
acagaggtgaagagtcagggatcggccggtgggcagcacgcatttccgtatgtggaggat
ccttcggatgaagaaatggcagattaccgatcataccgtaggatggaaacaccacagagt
gccagtcctgtaaagatcacggttacagcagagtcccagccagtgagagtgtctccacaa
gggggcatgtccgagagggaaagtgtgctcagtttcggtcagcagggtcttcccactgta
acactgtcagaaccagaggatgacagcgcagcttcctcagctaaccactcccctaaccac
tcccctacaggtcgagagtctccatctgatgtgctgttccagcctgcaggaatgaagtct
gtgagctccactcaagattccagcagcatcatctcacaccccagtattcctgaagtccag
gacatcaagagctcacccaaaccctcttccccatgggctcaagaccttcaagccagtgga
gatgagtctggagattcagaaattgagcaagtggctgaagaatctgattcaccaatacac
gacttgacatctaagaccccgcccgcaaaaggcggatttggtcaagcaagcaacccgttt
gagcagaccagctacacaactgccactgataaagctagtaacccatttgacaagccacaa
accaacaaggtcagtgctagtaacccatttgagctgtctgggaatatcaaggggggcttt
ggtcaatccagcaacccaccactctacagtctgttaagagaagaaagggaggcggagctc
gacagcgacttgctaattgaatcagcttctgaggagagtcccaagagggagcaggaatat
tccgcccaaaaacctcctgaaatatcttctcccctgaccacagccgtcacgtctactaag
cccatcacgactcccagccccacagcctctcccttcaccagccccccagccagcaccttg
atagaaacagagaaagaaaaagaaaaagaaaaagagaaggaaaaggagaaagctgcacct
gttgagaagcccaagccacaaccagaggacagctggtccaccaaacccaggcctgcagta
atgggaacgtccacagtgactccggagaagcattccagtcaggagcaggagaataaaagc
aaaagcagtgttgtgagttccaccacagagaaagatgctgatctgtccttgctcctccaa
agcatcaacagacagaaagtcatgggtggctcagtggtagatctgttacattggcgggat
atgaagcagtctggcctggtgttcggcagcgtgttgctgctgctgttctctctaacccag
ttcagcgtggtgagtgttatagcgtacctcgctctggctgtcctctccgccaccatcagt
ttccgagtctacaaatcagtcctacaggcagtgcaaaaaaccgacgagggccaccccttc
aaggcttatctggaggtggagatcgctctctctgcagatcagatcagtaagtatgtggat
aagactcagctgtacatcaactccaccatgaaggagcttcgcaggctgttcctggttcaa
gatctggtcgactccattaagtttgcagtgttgatgtggttgttgacctatgttggagca
ctgtttaatggcctgaccttgatgattctggtggtggtttccatgtttaccatgccattg
gtttacgagaagtaccagacacagattgatcaatacttaggactggtgcgcacccaggtt
aactcgataatgggaaaaattagagaaaaggttcctggggccaaaaagaaggaataa
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