Garra rufa (doctor fish): 141325325
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Entry
141325325 CDS
T11039
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141325325 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141325325 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141325325 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141325325
NCBI-ProteinID:
XP_073690031
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All DBs
Position
2:24713054..24722989
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AA seq
322 aa
AA seq
DB search
MPLRVVLQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCMGDMILAIDGESTDGM
THLEAQNKIKACIEEMVLSIDRSESKMWSPLVTEEGKTNPYKMNLANKEAQEVKLIGSAH
NRSAMPFNPASPRVVTNMYNNPSGLYSSENIKSFNSAVDDVQTSAASTEAIKNPDPCRPG
QPKPALTADSEVYKMLQENQESNEPPRQSASFKVLQEILETGDAEKPSGFRSVKAPTTKI
GASVGNPDKLSLCDKCGSGIVGMMVKVRDKFRHPECYICTDCGINLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacgggttgttttacaaggtcctggaccgtggggcttccgtctggtcggggga
aaagatttcgaacaacctctgactatctcgagggtgaccccaggaagcaaagcggctcaa
gctgacctttgtatgggggacatgatcctggccatagatggagagtcaaccgatggcatg
actcacctggaagcacagaataaaatcaaagcttgcattgaggaaatggtgctttccatt
gacagatcagagtcgaaaatgtggtccccacttgttactgaagaaggaaagaccaatcca
tacaagatgaatctggcaaataaagaagcacaggaggtaaaacttataggctctgctcat
aacaggagtgccatgcctttcaatcctgccagtccaagggtggtcaccaacatgtacaat
aacccctctggcctgtattcctctgagaacattaagagtttcaacagtgcagtggatgat
gtccagacttctgctgcttccactgaagccattaaaaacccagatccctgtagacctggc
cagccaaagcctgcattaactgcagactctgaggtgtataaaatgctgcaggaaaaccaa
gaatccaacgagccgcctcgccagtctgcctcttttaaagttctgcaggagatcctggaa
accggtgatgcagaaaaaccctcaggcttcagaagtgtcaaggcccctaccacaaaaatc
ggagcctcggttgggaatcctgacaagctctctctttgtgacaaatgtggctcagggatt
gtaggaatgatggtcaaagttcgagacaagtttcgccacccggaatgctacatctgcaca
gactgcgggatcaatcttaagcaaaaaggacacttttttgtcgaggacaagatttactgc
gagaaacacgcacgcgagcgtgtcactcctccagagggttatgatgttgtaactgttttt
ccaaagtag
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