Garra rufa (doctor fish): 141325331
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Entry
141325331 CDS
T11039
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141325331 (tial1)
03041 Spliceosome [BR:
grf03041
]
141325331 (tial1)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141325331 (tial1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141325331 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
141325331
NCBI-ProteinID:
XP_073690036
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Position
2:24933857..24944425
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AA seq
388 aa
AA seq
DB search
MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDSTRKVNSIGFSVLQH
TSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSVQDNSSKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQT
FSPFGQIMEIRVFPEKGYSFVRFSSHESAAHAIVSVNGTSIEGHVVKCYWGKESPDMTKN
VQPMEYGQWGHWNQMYSNPQQYGQYMTNGWQVPTSYGMYGQTWNQQGFGVEQSQSPAWVG
GFGTQPSQAQPGQVMNQANFSMAGYQTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagccacccaaaaaccctctacgtggggaatctttcaagagatgtaaca
gagaacttgattcttcagttatttactcagattgggccatgtaaaagttgtaaaatgata
acagagcaatccgatagcaccaggaaggtgaactctattggattttctgttttgcagcat
acgagcaatgacccgtattgctttgtggagttctttgaacacagagacgccgcagctgct
ttggccgccatgaacggaaggaagattttgggaaaggaagtcaaggtaaattgggcaacc
actcctagcagtcagaagaaagacacatccaatcactttcatgtttttgtgggagatttg
agccctgagatcacaaccgatgacatcagagctgcgtttgcaccctttgggaaaatctcg
gatgcacgagtggtgaaggatatgacaacagggaaatcaaaggggtatggatttgtgtcc
ttctataacaaactggatgccgagaatgccatagtgcacatggggggtcagtggcttggt
ggacggcaaatccggactaactgggcaactcggaaacctccagcccccaagagcgtgcaa
gacaacagctccaagcagctaagatttgatgaggtggtgaaccagtcgagtcctcagaac
tgcacagtgtactgcggtggcattcagtcaggtctcacagaacaccttatgcgacagacg
ttttctccatttggacaaataatggagatcagagtttttccagagaagggttattctttt
gtcaggttctcctctcatgaaagtgccgctcatgccatcgtctcggtgaatggtacctcc
atcgaaggtcatgttgtgaagtgctactggggcaaagagtcacctgacatgaccaaaaat
gtccagccgatggagtacggtcagtggggacactggaatcaaatgtacagcaatcctcaa
caatacggtcagtacatgacaaatggctggcaagtgcctacatcttacggcatgtacgga
caaacatggaatcagcaaggatttggtgtagaacaatcacagtccccagcctgggtggga
ggttttgggacgcaaccctctcaggctcagcctggccaagtgatgaaccaggctaacttt
agcatggctgggtaccagacacagtga
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