Garra rufa (doctor fish): 141325422
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Entry
141325422 CDS
T11039
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04814
Motor proteins
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141325422 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141325422 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141325422 (dctn1b)
03036 Chromosome and associated proteins [BR:
grf03036
]
141325422 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141325422 (dctn1b)
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
141325422 (dctn1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
141325422 (dctn1b)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
141325422 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
IFT57
Gemin7
Motif
Other DBs
NCBI-GeneID:
141325422
NCBI-ProteinID:
XP_073690195
LinkDB
All DBs
Position
2:complement(30996519..31038808)
Genome browser
AA seq
1260 aa
AA seq
DB search
MSQMKRYTYSRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGHRGTVAYIGNTLFASGKWV
GVILEEPKGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVEDGADTTSPDTPEAATSKMLK
REIIEGPKSNKVRGTKPKKAPTTRKTTTRRPKQTRAGVGVKVGSGSASAGEMSSSEPSTP
AQTPLAAPVIPSPVGTLPSPGAPPIPGPSKEEESLRTQVKDLEEKLETLKMKRTEDKAKL
KELEKHKIQLEQLQEWRSKMQEQQNELQKQLKEAKRESKEALEAKERYMEEMADTADAIE
MATLDKEMAEERAESLQLEADALKERVDELTMDLEILKHEIEEKGSDGAASSYHVKQLEE
QNGRLKEALVRMRDLSASEKQEHAKQQKLMEKKNFELDALRCQKEKLQEETKMAEKTIDE
LKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMNDELQENARETELEL
REQLDLSAASIRDAEKRVEAAQETVADYQQTIQKYRELTAHLQEVNRELMSQQEASTEQQ
QQPAEIFDFKIKFAETKAYAKAIEMELRKMEVTQANRQVSLLVSFMPDSFLKHGGDHDCI
LALLLIPRLICKAELISKQAQEKFELTETCAQKAGMRGAVGEQLSFAAGLIYSLSLLQAT
LHKYEHALSQCSVDVYKRVGSLYSEMCVHERSLDFLIDLLYKDLLDETVNVEPLTKAIKY
YQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMAVEVGRLRAFIQTGQDEEAFCVLLKD
LDTSCSDIRQFCKKIRRRMPGTDAPGIPAALGFGPQVCETLAESRRQLAWVNAVLQEVAA
AAAQLIAPLSEHEGLPAVKLEDMAFKAAEQIYGSQGINPQECLRQSCSVVIATMNKMATA
MQEGEYDSERPQNGISPVDVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEEL
SEANVRLSLLEKKLDSASKDADERVEKIQTVLDETVSLLKKKEKEFEETMDALQADIDQL
EAEKVELKQRINSQSKMTMEGLRGSQGSGIASIVTCGITPGVCAAAGLQVIDSPLLTQQI
EAQRLSIKHLKNENNRLKAEKMRAQLASLPPLNVPKLGWREGCRPEVLSSALYRKTDQLL
DTLLQMSANVKVVDITGKSPVSPSAQLLEQTARLQSLNDTLDRLKDEVAEHVVTHRPGAQ
VSSDFATFPCTSFVKAKEEKKGDAVLVGRVMMPCARGQEQVHRLVLSNTQLQRVHRLLQT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatgaaacgatacacttacagcaggaccaccagcagcggcagcagcaggatg
agttcagatggaggtgggcggcctgttaaggtgggttctctggttgaggtcatcggtaaa
ggtcatcgaggcactgtggcatatattggaaacaccctctttgcttctggaaaatgggtg
ggggtcattctagaggaacctaaaggcaagaacgatggcactgtgcagggtaaacggtac
ttcacctgccaggagaaccatgggatatttgtacgccaatcacagattcagttagtagaa
gatggggccgacacaacatctcctgacacgcctgaagctgccacctccaaaatgctaaag
cgggagataattgaaggtccaaagtcaaacaaagtgcgaggaaccaaacccaaaaaggca
cctacgactcgtaagaccaccaccagaaggcccaagcaaacgcgggctggagtgggggtg
aaggtgggctctggatcagcttctgctggagagatgagcagcagtgaacccagtacacct
gcccaaacaccactggccgctccagttataccttcacctgtgggaacactgccctcgccc
ggggctcctcctatcccgggacccagcaaggaagaggagtcactgcgcacccaggtgaag
gatctggaagagaagctggagacactgaagatgaagaggacagaggacaaggcaaagctg
aaggagcttgagaagcacaagattcagctggagcagctgcaggagtggaggagtaagatg
caggaacaacaaaatgagctgcagaaacaacttaaggaggccaagagggaatccaaggaa
gctcttgaagctaaagaacgctacatggaagagatggcagatacagcagatgccattgag
atggccacgctggataaggaaatggctgaagaacgagccgagtcactgcaactggaggct
gacgctctgaaagagagagtggatgagctgaccatggacttggagatactcaaacatgag
atagaggaaaaaggatcagatggagcagcgtctagttaccacgtgaagcagttagaggag
cagaatggtcgactgaaagaggctttagtgaggatgcgtgacctctctgcatcagagaaa
caagagcatgcaaagcagcagaaactaatggagaaaaagaattttgagctggatgcgctg
agatgccagaaagagaaactacaggaggaaacgaagatggctgagaaaacgattgatgag
ctcaaagagcaagtggatgctgctcttggtgcggaagagatggtggagatgttgacggag
cgtaatctggacctggaggagaaagtacgggagctcagagaaactgtcacagatctggaa
gccatcaatgagatgaatgacgagctgcaggagaacgccagagagacggagctggagttg
agagagcagttggatctgagtgctgccagcattagggatgcggagaagcgggtggaggcg
gcacaagaaacagtagcagactaccagcagaccatccagaaatacagagagctcaccgca
cacctgcaggaggtgaacagggagctgatgagccaacaggaagccagcactgagcagcag
caacagcctgcagagatcttcgatttcaagatcaaatttgcagaaaccaaagcttacgcc
aaggccatagaaatggagctgcgtaaaatggaggtaactcaggctaacagacaggtgtca
ctgctggtttcctttatgcctgactccttcctgaaacacggaggagaccatgactgtatc
ctggctttactgcttatcccacgactcatctgcaaggcagagctgatcagtaagcaggct
caggagaagtttgagttgactgagacgtgcgctcagaaggccggcatgagaggagccgtt
ggagaacagctgagttttgctgctggactcatctattctctctcactgctacaggcaaca
ctgcacaaatatgaacatgctttgagtcagtgcagtgtggacgtgtacaagcgtgtgggc
tctctgtactctgagatgtgcgttcatgagcgatccctggatttcctcattgaccttttg
tacaaagacctgctggatgaaaccgtcaatgtggaaccacttaccaaagctattaaatac
tatcagcacctttatagtattcatctcgctgaacagcctgaggactgtaccatgcagcta
gcagaccacattaaattcacccagagtgctctggactgtatggcggtggaagtggggcgt
ctaagggcctttattcagacaggacaggatgaagaagcgttttgtgtgctgctgaaggat
ctggacacttcctgtagtgacattcgacagttctgcaagaagatccgtcgtcgtatgcca
ggcactgatgcaccgggcatcccagctgccctcggctttggaccacaggtgtgtgagacc
ctggcagagagcagaaggcagctggcctgggtgaatgcagtgcttcaggaagtggcagcg
gcagccgctcagctcatcgcccctctcagtgaacatgagggactgccagccgtcaaactg
gaagacatggcctttaaagcagctgaacagatctatgggtcacagggcataaaccctcag
gagtgtctgcgccaatcatgcagtgttgtgatagcaaccatgaacaagatggctaccgct
atgcaggagggagaatatgactctgaaagaccacagaatggaatatctcctgtggacgtc
cgagcagctgcactaagggcagaaatcactgatgctgaaggactcggcctcaaactggaa
gatagagaaactgtcattaaagagcttaagaaatcccttaaaataaagggagaggaactg
agtgaggccaatgtgcgtctcagtttactggagaaaaagttggacagcgcatctaaagat
gcagatgagcgagtggagaagatccagacagtcctagatgagaccgtttcactgctgaaa
aagaaggaaaaggagtttgaggagaccatggatgctctccaggctgacatagaccaacta
gaggcagagaaagtagagcttaagcagagaatcaacagccaatcaaagatgaccatggag
ggtctgagaggaagtcagggctctggcatcgcctccattgtgacttgtggcatcactcct
ggtgtgtgtgcggcggcaggactgcaagtgatagattctccactgttgactcagcagatt
gaagctcagcgactgagtataaagcacctgaagaatgaaaacaacagactaaaggcagaa
aagatgcgtgctcagctggcatctcttcctcctctgaatgtgccaaagctgggctggcga
gaaggctgtaggcctgaagtgttgtctagcgccctctaccgaaaaacagaccaactgcta
gatacgctcctccagatgagtgccaatgtgaaagtagtcgacatcacaggaaaatctcca
gtgagtcccagtgcacagctcctagagcaaacagcaaggctgcagtcactcaatgacact
ctcgataggcttaaggatgaagttgctgagcatgtggtgactcataggcctggtgctcaa
gtctcgtctgatttcgccacttttccctgcacttcctttgtaaaggcaaaggaggagaag
aaaggagatgcagtgttagtcggtcgtgtgatgatgccttgcgctcgaggacaggaacag
gtgcatcgtctagtgctttcaaacacacagttacaaagagttcatcgccttcttcagact
taa
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