KEGG   Garra rufa (doctor fish): 141325697
Entry
141325697         CDS       T11039                                 
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03013  Nucleocytoplasmic transport
grf03015  mRNA surveillance pathway
grf03040  Spliceosome
grf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141325697 (alyref)
  09122 Translation
   03013 Nucleocytoplasmic transport
    141325697 (alyref)
   03015 mRNA surveillance pathway
    141325697 (alyref)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    141325697 (alyref)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141325697 (alyref)
   03041 Spliceosome [BR:grf03041]
    141325697 (alyref)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     141325697 (alyref)
    TREX complex
     141325697 (alyref)
Spliceosome [BR:grf03041]
 Complex C
  Other components
   EJC/TREX
    141325697 (alyref)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    141325697 (alyref)
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N
Other DBs
NCBI-GeneID: 141325697
NCBI-ProteinID: XP_073690558
LinkDB
Position
1:64690664..64695431
AA seq 279 aa
MADKMDMSLDDIIKQNRQRGGGGRGGRGGRGGRGGTGGGRGAGASGRLGNTGGGFGGRGG
GSGPMRNRQNLSRGRSRPTPYSRPKQLPDKWQHDLFDNGYSSNAGGGGGGGGGGAGVETG
GKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ
YNGVPLDGRPMNIQLVTSQIDAQRRTPMQGLNRGGGGGMNRNRIGGFGAQKGRGGRGGGG
GSRGRGRGGRGGGGTSKQQLSAEELDAQLDAYNARMDTS
NT seq 840 nt   +upstreamnt  +downstreamnt
atggcagacaagatggatatgtccttggacgacatcatcaagcaaaacaggcagcgtgga
ggtggcgggcgcggcggcagaggaggccgcggtggccgcggaggcacaggcggcggccgc
ggcgctggcgccagcgggcggcttggaaacacaggcggaggctttggaggccgcggcggg
ggatcgggccccatgaggaaccgccagaacctgagccgcggaagaagcagacctacgccg
tacagcaggcccaagcagctcccagacaagtggcagcatgacctgtttgacaacggctac
agctcgaacgctggcggtggaggcggaggcggcggtggtggagcgggcgtggaaaccgga
ggaaagctcctcgtgtccaatctcgacttcggcgtctccgatgcagacattcaggaactc
ttcgcagaatttggcactttgaagaaagcagcagtacattacgatcggtcaggacgcagc
ctcggcaccgccgacgttcactttgagaggaaagcagacgctctgaaagccatgaagcag
tacaacggtgttccccttgatggtcgcccaatgaacattcagcttgttacatcacagatt
gacgcacagaggcggactccgatgcagggtctaaatcgtggtggtggtggcggcatgaac
agaaaccgaatcgggggctttggcgcacagaaaggtcgcgggggacgtggcggcggagga
ggatccagaggtcggggacgaggcggtcgaggcggtggtggcaccagcaaacagcagctt
tctgccgaagagctggacgcccagctagacgcctacaatgccaggatggataccagctaa

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