Garra rufa (doctor fish): 141325855
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Entry
141325855 CDS
T11039
Symbol
hpse2
Name
(RefSeq) inactive heparanase-2
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00531
Glycosaminoglycan degradation
grf01100
Metabolic pathways
Module
grf_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
141325855 (hpse2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141325855 (hpse2)
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Enzymes
141325855 (hpse2)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
141325855
NCBI-ProteinID:
XP_073690685
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Position
2:complement(12544240..12651032)
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AA seq
554 aa
AA seq
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MPRQFFCPVFGSSLWLALILQSLISSAATYRRPVSGGKRQSFLERTLILLDVNTRSPVKV
LNDNFLSLQLDPSIIKDGWLDFLSSKRLVTLARGLSPAYLRFGGKRTDFLQFHNLKNLAK
FRGPGPDYYLKNYEDDIVRSDFALDKQKGCKLASHPDMMLELQREKAAQMQQVLLKEQLS
NIYSDVTLTARSLDKLYNFADCAGLHLIFGLNALHRNPDNSWNASSALSLLKYSAGKKYN
ISWELGNEPNSYRTMAARSVNSSRLAQDYSVLKTLLQSVRFYSRANLYGPNIGRPRKNAI
LLLDGFMKNGGSVVDAVTWQHYYIDRRVTKVEDFLKTRLLDTLSEQITKVLKTLDGKLLC
VVLKLESWDLISNHAHGLFVDSLIYIERKNRSQDADFYRSAAWDYWLSLLFKRLVGPRVL
AVHVAGLQRKPRPGRVIRDKLRIYAHCTSFHNHDYVRGSITIYIINLHRSRKKIKLAGTL
RNKTVHQYLLQPFGTDGLHSTSVQLNGELLRMVDNETFPELKPRTLRAGRTIAMPPVSIG
FYVIKNINAYACRR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcagttcttctgcccagtgttcggctcgtcactgtggttggcactgatactc
cagtctctcatttcctccgccgctacctacaggagaccagtgtccggagggaagagacag
agctttctggagaggaccttgattttactggacgtcaatactcgaagcccggtcaaagtt
ttgaatgacaacttcctctcgttgcagttggatccatctatcataaaggatggctggctg
gacttcttaagctccaagcggttagtcactctggcacggggactctctccagcttatttg
aggtttgggggcaaacggaccgactttctccagtttcataacctgaagaatctcgcaaag
tttagagggccgggaccggactattacctcaaaaactatgaagatgacatagtgcgcagt
gacttcgctctggacaaacaaaagggttgcaagctggccagccacccagacatgatgctg
gaattgcagcgggagaaagcggctcagatgcaacaggtcttgttaaaagaacagctctcc
aatatatacagcgacgtcacattaacagccaggtctttagacaaactttacaactttgcc
gactgcgcgggactgcacctgatctttgggctgaatgccttgcacagaaaccctgacaac
tcatggaacgcctccagtgctctgagtctgctcaaatacagcgccggcaaaaaatacaac
atctcttgggagctcggcaatgagcccaacagttaccgcacaatggctgctcgatcagtc
aacagctctcgtctggctcaggattactctgttctgaagacgttactgcagtctgtgcgt
ttctacagccgagcgaacctctacgggcccaacattggccgtcctcgcaaaaatgcaatc
ctgttactagatgggtttatgaaaaacggtggttctgtggttgacgcagtaacgtggcaa
cattactacattgacaggcgggtgaccaaagtggaagacttcttgaagacgagactcctg
gacaccctgtctgagcagattactaaagtgttaaagactctggacggcaagctgctgtgt
gttgtgttgaagttggagagttgggatctcatctcaaatcatgcccacggactgttcgtg
gacagtctgatttatattgagcgcaaaaacaggagtcaggatgcagatttttatcggtcg
gctgcatgggattactggttatctctgctctttaaacgtctggtgggccccagggtgctt
gcggtgcacgtcgcaggtctccagaggaagccgcgccctggacgggtgatccgggacaaa
cttcgcatctatgcgcactgcaccagttttcacaatcatgattatgtcagaggatccata
accatctacatcatcaacctgcatcgctcacggaagaaaattaagctggccgggacttta
cgaaataaaactgttcaccaatacctgttacagcccttcggcacagatggacttcactcc
acgtctgtgcagctgaacggagagctcttgcgtatggtggacaatgagacgttccctgag
ctgaagccacggactctcagggcaggaaggacgatagccatgccacctgtatccatcggc
ttctacgtcatcaagaatattaacgcttacgcctgccgcagataa
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