Garra rufa (doctor fish): 141325884
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Entry
141325884 CDS
T11039
Name
(RefSeq) zinc finger FYVE domain-containing protein 26-like
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
grf Garra rufa (doctor fish)
Pathway
grf04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
141325884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141325884
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141325884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
FYVE
TPR_2
Motif
Other DBs
NCBI-GeneID:
141325884
NCBI-ProteinID:
XP_073690712
LinkDB
All DBs
Position
2:18797716..18827861
Genome browser
AA seq
2560 aa
AA seq
DB search
MHPFGREEETSRRELFGFFTRCLKRGEWELAAACVGQLGDRRKDDLHSPHDIVKAIVTHP
YPLRWETVGSPHRLAWYWLQVLEKQTKIKVSRSVKRELEFMLLLEELEDVPLSVLKELHE
AFLYSEKVKKKIPGDSTPPLSAAVLSCLRTLLTRQQPRLCHSLISFLQHSGHSRDHALQD
VFIQHLTQRVNVPVDERNEKWVEEVCSVLALAPWGPERSNAQLETLWEGVWSAREGPMTE
ERILGCLLRPQGHALLMAYSSTALRLLKEKLLREAPHTQVDLPDLERVMLGLCCHGDKRL
VWKAIYFECLSTGKHFLEQVLLTGLDLIKREEFTKLETLLQAEFQPLSRLLLLMGWMHCQ
SLDSAKTLLRVLHHQQPQKNDSVLCEIACTLSSQLGVLEWCNQNSPGISHDALLSHLHML
DHHSALYVLHSLTPLTKYEEHKVLELLQKTGDPSLEDSPSSTVQRNITLFRGFCAMKYAL
YAICVNAHMHTGCLDCESLHKQQTEAGQGDEPTEGCSDLFQHYLSECQLYLEAVPALFRL
ELLENIFSLLFLSDSDFSPQSDQISTGTETQPDTNTEKRKPNSTKSMSTTESLLKTEKES
GEMEELKEEIQSRQSDRINPELGHLTSGCRGFLVDLSVMEGILRLVREGLEGVCGVGQED
GRALAADVELAESLGCSVTAETFSARLQRLSKYTAEAQWRLQIVTSNHGNGNDGLYLPSP
LPSPAFPLKRQGSGSSGSGVRRKRKKHRHRSERHASSERQNGEVSTGTSDGGVCVGSVCR
GSEVCPCGGPHSWLVPAMLSPPESLLIACIRRGNYIEAQQVIAMYGLENSECAGELVFMD
RYREVLNELAQVEQKIESQSLSSSSSSSEGLGTVGVAPAGRTRMGSSSRLTLKSIGSAAA
AGMAFYSISDVAERLLSTLSRPIPCLEDNYWLSQCSIDSPDLARPLLEELSPAAMAAFDL
SCCQCQLWKTSRQLLETAERRLSSFLEARGVRVDLKVPHANSIRGFPSVLQQISKVLNRT
CVSKGTNCNGEETAVCSPFGCSAQEVLLSCHTTLTEESIASRLNLNQRLEVTLQTLTSAT
NISVDGLAGNSLLTALTEQAGLKQSELDSHPVRTAMKQLLQYLDQLCPFESDSAPGRPDY
IRNFLDYVNVLASVLVRSLWSEDQSTEVKLGNPLLLLLQSPTQLLSLLLFDRQVSPDRVL
SLLQQERLRLSVQQVVVQRCCETLPLMDSRAVTFSQGPPRIAGLNSGVFCPASIASILQQ
YAQECAPSLDLSDPATTSDPSSESEVSMEDMSATSTNLSTSPPSPSSCPPSSFLLTPSAL
SFLKSRSPLVAALACLSVSRGGVTRATSSGWSGYFRGSGRKEVVLDGDQISKEGEALLKN
YPILRMYLRTMAEPVLGVSLEADEGLGAALCGKPVVGMLFSGLQGNVGQTMAVEAFQQAL
NMGDLNRALDLLELYAQPCSQEGALRDKLLACTALQECSSVEQLFRVRDWELRGRVVLQG
LDRWPLQQCLELLQFCLSDQNTKDPLREQLQQRKHELDMYQRMLSLQPPLPWETWQELRE
ESTKNPESVFSLMLEAREFELCTQWVQLYSVSDQSRMQLQTEHLLYLLEQNHTEDAFQLL
EALSDSVGLEVSERALDRRPGLAACHFLSDYLTLHFQSQMTPARRRHINALHLGSKVLLT
LPEASHQDYFSLLSDPLLMLEQLLMNLKVDWATVAISTLRSLLPAQDAGITNQHIDALLA
DYAQKALDFPYAPREWSRSDSVISLQDAFLQCPAQESCPSSPSHTPPPSAGSTPMHTPSS
DRRPSARRIRLATPFTPPEKTPDRKDWIPDHKQHICMVCQRERFTMFNRRHHCRRCGRLV
CHSCSSKKMVVEGFEEPVRVCDQCYNFFHTDSDEELEQGEAGSPASVDGVLNGVLSLPEV
PRKQYHLSPNPAENQQLKSEFYYEQAPSASLCVAILTLHSDHAACGQQLIGHCRSLSRKL
TNPEVDARLLTDVMRQLLFSAKLMFVNAGCSHEPALCDSYISKVDVLKILVSANYKYIPS
LDDIQEMAAVTRLRNQLLEAEHYQLAVEVSTKSGLDPNGVWQAWGMASLKAGNLSGAREK
FTRCLKAPVDRNQLNHGGRLLQEIVQHLESTVKPTLSMTVDEDILASLRELEEALSDSAP
LDGAESRVQRCSYYQECLFYLLTYGTHLSLISFYLRHDCLRDALTHLQNKECSEDVFLEG
IFQPCLERGRLGALQGLLETLDPTLETWGRYLLSACQFLQRRGHYHSLYQLQQFMMDHIR
AAMTCIRFFSHGAQSYLQLGEQQRWLIRAKEHLRTYLQEQQSRRKSHSSSFRKKMSSTDV
SRHIHTIELQLEVTRFLHRCESSPSKTGVGPALSGNSAPPTLFGNSPMKVDVACKVMLGG
KNIEEGFGIAYRVIQDFQLEALAVYIRVGQRLVRQRQYASVRQLLKCVGESGTASKHDCD
AIVLSCVSVADKSPGDAKELEALILESKSPENKIKAYLQCSKLRAAYLLAVKLELAKAAP
FVQDVMRSAESSGDSVMHDICRQWLSEHQERSSRQRQSNN
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atgcatccatttggacgtgaagaagagacctccagacgcgagctcttcggcttcttcact
cggtgtttgaagcgcggtgagtgggagcttgcggcagcctgtgtgggtcagctcggtgat
aggcgcaaagatgatctccatagcccgcatgacatcgttaaagccatcgttacccaccca
tacccgctcaggtgggaaacagtgggcagtcctcacagactggcctggtattggcttcaa
gttctggaaaagcagactaaaataaaggtgagcaggtctgtgaagagagaactggagttc
atgttgcttctagaggaacttgaagatgtgcccctgtctgtacttaaggagctgcatgaa
gctttcctgtactctgagaaagtaaagaaaaagattccaggtgattccacccctccactg
agtgccgctgttctatcctgcctccgtactcttttaacccgccagcagccgcgactctgc
cactctctcatcagcttccttcagcactcaggccactccagagaccatgccttacaggac
gtcttcatccagcacctcacccagcgagtgaacgtacctgtggatgagaggaacgagaaa
tgggtggaggaagtgtgttcagttctggccttagcaccgtgggggccggagaggtcaaat
gcccagctagagaccctgtgggagggtgtgtggtcagctagagaagggcccatgacggag
gagagaattctgggatgtctgctaaggccgcagggacatgcactgttgatggcatacagc
tccacagcgctcagactgctcaaagagaaactgctaagagaggcaccacacacacaggtt
gatttgcctgatctggaaagagtcatgcttggcttgtgctgtcatggtgacaagcgtttg
gtgtggaaagccatttactttgagtgtttgagcactggaaagcactttctggagcaggtc
ttgcttactggtttagatctaataaagcgggaggaattcaccaaactggaaacactattg
caggctgagtttcagcctttgtcccgcctcttgttgttgatgggctggatgcattgtcaa
agcctggattctgccaagacccttctgagagttctacatcaccaacagcctcagaaaaat
gattcagtattgtgtgagatagcttgcactctgtcctctcaacttggtgtgctggaatgg
tgcaaccagaacagtccagggatatcccatgatgccttgctgagtcacttacacatgctg
gaccatcactctgccctgtatgtgctgcactctctgacacctctcactaaatacgaggag
cacaaagttctggaactgctgcaaaaaacaggagatccttcattagaggactcacccagc
agcactgtccagcgaaacatcactctgtttcgaggcttctgtgccatgaagtatgctctc
tacgccatctgtgtgaacgcgcacatgcacacaggatgcctggactgtgagtcactgcat
aagcagcagacagaggcaggtcaaggggacgagccaactgaaggatgctctgatcttttc
cagcactacttatcagaatgtcagctctacctggaagctgttccggcgttattccgtttg
gaactcttggagaacattttctccctcctcttcctttctgactctgacttcagcccacaa
tcagatcagatcagcactggcacagaaacccaaccagacacaaacactgaaaagaggaaa
ccaaacagtactaaaagtatgagcacgactgagagcctcttgaaaacagaaaaggaaagt
ggagagatggaggaattgaaagaagagatccaaagcagacagtctgatcggataaaccct
gagctgggccacctgacttcagggtgtcgtgggtttctggtggacttaagtgtaatggag
gggattctacggctggtgagagagggcttggagggcgtatgtggggtcgggcaggaggac
ggcagggcacttgcagctgatgtggagttggcagagagtctgggatgttctgttacagca
gaaacgttcagtgcccggttacagagattgtctaaatacacggcagaagcccagtggaga
ttgcagattgttactagcaaccatggtaatgggaatgatggcttgtacctcccatctcca
ctccccagtccagcatttcctctgaaacgccagggcagtggtagcagcggttcaggtgtt
cggaggaagagaaaaaaacatcgacatcgctctgaacgtcacgcttcatcggaacgacag
aatggggaggtcagcaccggcacctcagatggcggggtgtgtgttgggagtgtgtgccgt
gggagtgaagtgtgtccgtgcggtggaccacacagctggctggttcctgcgatgctctcc
ccacccgagtctctcctcatcgcctgcatacgcagaggcaactacatagaggcccagcag
gtgattgcgatgtatggtttggagaactctgagtgtgcaggtgaactggtctttatggac
cggtaccgagaggtcctgaatgagctggctcaggtggagcagaagatagagagccagtca
ctttcttcatcatcctcgtcttcagagggtctgggcacagtgggcgttgctccagcaggc
agaaccagaatgggcagcagcagcagattaacacttaaaagcattgggagtgcagcagcc
gcagggatggccttttattctatctctgatgtggctgaacgtttactcagcaccttgagc
cggccgataccctgtctagaggacaattactggctctcccagtgctctatagactcgcca
gacctcgcgcgacctcttttggaagagttgagccctgcggctatggcggcttttgacctc
tcctgctgtcagtgccaactgtggaaaacttcaaggcagttgcttgagactgctgaaaga
agacttagcagctttctggaggctagaggtgtacgagtagatctaaaggttcctcacgct
aacagtattagaggcttcccttcggtactgcaacaaatcagcaaggtcctcaatagaacc
tgcgtcagcaaaggaacaaactgtaatggagaggagactgctgtctgcagcccctttggc
tgtagtgcccaggaagtgctgttgtcttgtcatactacattaacagaagaaagtatcgcc
tcccggctaaacctgaatcagcggctagaggtcacgcttcaaaccctgacctctgccacc
aacatctcagtagatggactggcggggaactctctcctgacagcgctgactgaacaggct
ggtcttaagcagtctgaactagattcccacccagtgcgtactgctatgaaacaactccta
cagtatctggaccagctctgcccgtttgagtctgacagtgcccctggccgaccagattac
atacgcaacttccttgattatgtcaatgtgttggcttcagtactggtgcgcagtctgtgg
tcagaggatcagtctacggaagtgaaacttggaaatcctcttttactgttgcttcagtcg
cctacacagcttctctcactgctgctgtttgacagacaggtgtcacctgatagggttctg
tctctcctgcagcaggagcggctgcgtttgagcgtgcaacaggttgtagttcagcgctgc
tgtgaaactctccctcttatggattctagagctgtgactttttctcaggggccaccaagg
attgcagggctcaatagcggtgtgttctgcccagccagcattgcctcaattctccagcag
tatgctcaggagtgcgccccttcccttgacctctctgatcctgccacaacctctgaccca
agttctgagtctgaggtctcgatggaggacatgtctgctacatccaccaatctctccact
tctccgccatcaccatcttcgtgccctccttcttcttttctcctcactccatctgcgctg
tctttcctgaagtcacgttcccctcttgttgctgccttggcttgtctcagtgtcagtcgg
ggtggtgtgacccgggcaacctcctctggctggtcaggctattttcgtggatctgggcgt
aaagaggtggttttggatggagaccagatctcaaaggaaggagaagccctgcttaaaaac
taccctatcctgagaatgtacctacggaccatggcagagccggttctaggggtgtcgttg
gaagcagatgagggtcttggggcagctctctgtgggaagcctgtggtaggaatgttgttt
tctggcttgcagggcaatgtgggacaaacaatggctgtggaggctttccagcaagcccta
aacatgggtgatctgaacagagccttagacctcctagagctgtatgcacaaccctgcagt
caggagggggcacttcgggacaaactactggcatgcactgcactgcaagaatgcagcagt
gtggagcagttgtttcgtgtaagggactgggagctgcgtggacgtgtggttctgcaaggt
ttagaccgctggcctttacaacagtgtttagagctgctgcaattctgtctcagtgaccag
aacaccaaggatccacttcgagagcagcttcagcagaggaaacacgagctggacatgtac
cagcggatgctgagtttgcagccaccgttgccatgggagacgtggcaggagttgagggag
gagtctacaaagaatcctgaatctgtgttcagtctaatgctggaggccagggagtttgag
ttgtgtacccagtgggtgcagctgtattcagtctctgatcagtctcgaatgcagctgcag
accgaacacctgctatacctcctagaacagaatcacacagaagatgctttccagctcttg
gaggctctctctgattcagtgggtttggaggttagtgagcgagccctggatcgaagacct
ggattggcagcctgccacttcctatcagactacctcactttgcacttccagagtcagatg
accccagcgcgaaggcgccacatcaatgcccttcaccttggctccaaggttctactcact
ctgccggaagcatctcatcaggactatttttccctgctgtctgatccgcttctcatgctg
gagcagctgctgatgaatctgaaggtagactgggccactgttgccatcagcactctacgg
agccttctgccagctcaggacgccggcattaccaaccaacacattgacgccctactagca
gattacgctcagaaagctcttgattttccttatgcacccagagagtggtcacgttctgac
tctgtcattagtctgcaggatgcttttctgcagtgtccagcccaggagagttgcccctct
tctccaagccacaccccgcctccatcagcaggcagcacacctatgcacacaccctccagt
gacagacgccccagtgcaaggaggatccggctggccacacctttcacccctccggagaaa
acccctgaccgcaaagactggatcccagaccacaaacagcacatttgtatggtctgccag
agggagagattcaccatgtttaataggcggcaccactgcagacgctgtggtaggctggtg
tgtcattcttgctccagcaagaagatggttgtagagggctttgaagagcctgtcagagtt
tgtgaccagtgctacaacttcttccacacagactcagatgaggagcttgaacagggggaa
gctgggagccctgcgtctgttgatggagtcctgaatggggttctcagtctgcctgaggtt
ccacgaaagcagtaccacctgagtccaaacccagcagagaaccagcagctgaagagcgag
ttctactatgagcaggcacccagcgcatcactatgtgtcgctatattgacactacacagt
gatcacgcagcctgcgggcaacagctgattggccactgccgctcactctcccgcaaactg
accaatcctgaggtggatgcacgtctgctgacagatgtgatgcgtcaactgctgttcagt
gccaaactaatgttcgtaaatgcaggatgcagtcatgaaccggcactctgcgacagctac
atcagcaaagtggatgtgttgaagatcctagtcagtgcaaactacaaatacattccatct
ctggacgatattcaggaaatggctgcagtgacgcgtctgcgcaatcagctactagaggcc
gaacactaccagctggctgtggaggtgtcgactaagagtggactagacccgaatggggtt
tggcaggcctggggtatggcgtctttgaaggctggaaatctaagcggggccagggagaag
tttacccgctgtctgaaagcaccagtagatcggaaccagctaaaccatggagggagactt
ctgcaggagatcgttcagcacctggagtccacagtcaaacccactctgagcatgacggtg
gatgaggacatcctggcctctttgcgtgagctggaggaggctctttctgattctgctcct
ctagatggagcagagagcagagttcagcggtgcagctattatcaggagtgtctgttttac
ttgctcacttacggcacacacctaagcctcatcagcttttacctgcgtcacgactgcctg
agagatgcactcacccacttacagaacaaggagtgttcagaggatgtgtttctggagggc
atttttcagccctgtcttgaacgtgggcggttgggggctttgcagggccttttagaaacc
ctggaccccactctagaaacctggggccgttatcttctttcagcctgtcagtttctgcag
cgcaggggacactaccactctctgtaccaacttcaacagtttatgatggatcacattcgt
gcagctatgacttgtatccgcttcttttctcacggtgctcagtcatatctgcagctggga
gaacagcagcgctggctgatccgagccaaagagcacctgagaacttacctgcaggaacaa
cagagccgcaggaaatcacacagctcctcttttaggaagaaaatgagctccactgatgtc
tccaggcacatacacacaattgagctgcagttggaggtgacacgctttttacaccgctgt
gaaagctcaccatccaagacaggtgtaggccccgccctctcagggaacagtgctccaccc
actctgtttggaaacagccccatgaaggtggatgtggcctgcaaggtgatgctgggaggc
aagaacattgaggaaggtttcggcatcgcatatcgagtaatacaggactttcagttggaa
gcactggcggtgtacatacgggtcggacaacgcctcgtccggcagcgtcagtatgcatct
gtgcggcagctgctgaagtgtgtaggggagtctgggacagcctctaaacatgattgtgat
gctattgtgctcagctgtgtctcagtggctgataagagtccaggcgacgctaaagaacta
gaggccctgattctggagtctaagagtcctgaaaacaagataaaggcatatcttcagtgc
agtaagctgcgggcagcgtatctcctggcggtgaagcttgagcttgcaaaggcagctcca
tttgtacaggatgtgatgcggtctgccgagagctcaggtgactcagtcatgcacgacatc
tgccgccagtggctctcggagcatcaagaacgatcatcacggcaacgacagagcaataac
tga
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integrated database retrieval system
