KEGG   Garra rufa (doctor fish): 141326090
Entry
141326090         CDS       T11039                                 
Name
(RefSeq) opsin-VA
  KO
K04256  c-opsin
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:grf01009]
    141326090
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:grf04030]
    141326090
Protein phosphatases and associated proteins [BR:grf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     141326090
G protein-coupled receptors [BR:grf04030]
 Rhodopsin family
  Vision
   Opsin
    141326090
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srv 7TM_GPCR_Srsx TMEM116 7tm_4
Other DBs
NCBI-GeneID: 141326090
NCBI-ProteinID: XP_073690888
LinkDB
Position
2:3083707..3119279
AA seq 382 aa
MESFEVAVNGVSFTEDPFSGPLTSVAPWNYKVLAALMFVVTAVSLGENFTVMLVTFRFKQ
LRQPLNYIIVNLSLADFLVSLTGGMISFATNYHGYFFLGRWACVLEGFAVTFFGIVALWS
LAVLAFERFFVICRPLGNIRLRGKHAALGLLFVWTFSFIWTIPPVLGWSSYTVSKIGTTC
EPNWYSGNFHDHTFIITFFTTCFIFPLGVIIVCYCKLLRKLRKVSNTHGRLGNARKPERQ
VTRMVVVMIVAFMVAWSPYAAFSIVVTVCPSIHLDPRLAAVPAFFSKTAAVYNPIIYVFM
NKQFRKCVVQLLSCSDVTIVEGNINQTTERAGMTNESNTGEMSTIAARIPATGTVPPKTE
EHPNERSSFAQIPIPENKVCPM
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggagtcgtttgaagtggcggtgaatggcgtctcgttcaccgaggatccgttctcggga
ccgctcacgtccgtcgcgccctggaactataaagtcctggcggcgctgatgttcgtggtg
accgcggtgtctctgggcgagaacttcaccgtgatgctggtcaccttcaggttcaagcag
ctcagacagccgcttaattatatcatcgtcaatctgtctctggcggactttctggtgtcg
ctgactggagggatgataagttttgcgactaactaccacggctatttcttcttggggaga
tgggcttgtgttttggagggatttgcagtcaccttttttggaatcgtggctctgtggtct
ctggccgtcctggcgttcgagcgtttcttcgtcatctgtcgtccgctggggaacatccgt
ctgcggggcaaacacgccgctctgggtctgctgtttgtgtggaccttctccttcatctgg
accattcctcctgtcctgggctggagcagctacaccgtcagcaagatcggcaccacctgc
gaacccaactggtattcgggaaacttccacgatcacaccttcatcatcacattcttcacc
acctgcttcatctttccgttgggtgtgatcatcgtctgctactgcaaactgctccggaag
ctcagaaaggtgtccaacacgcacggcaggctgggtaatgccaggaagccggagcgtcag
gtgactcgtatggtggttgtgatgatcgtggcgttcatggtggcttggtctccatacgcc
gcgttctccatcgtggtcacagtctgtcccagcattcacctggacccgcggctggcagcc
gttccagccttcttctctaaaaccgcggcggtttacaaccccatcatctacgtgttcatg
aacaaacagttcaggaagtgtgtggttcagctcttgagctgcagtgacgtcaccatcgtc
gaggggaatatcaaccagaccacagagcgtgcaggcatgaccaatgagagcaacacagga
gagatgtccaccattgctgcacgcatccctgccactggaaccgtcccacctaaaacagaa
gagcatcccaatgaacgcagctcgtttgcccaaattcccattcctgagaacaaagtatgt
ccgatgtga

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