Garra rufa (doctor fish): 141326151
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Entry
141326151 CDS
T11039
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141326151 (btaf1)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141326151 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_GCN1_C
HEAT_MROH2B_C
Vac14_Fab1_bd
TOR1L1_N
TPR_Trm732_C
HEAT_2
HEAT_GCN1_C_2
HEAT_GCN1
HEAT_EZ
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
141326151
NCBI-ProteinID:
XP_073690963
LinkDB
All DBs
Position
2:10839288..10885186
Genome browser
AA seq
1860 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPAPKPKDEVCAEDMSPEDNSSDRLSFYRFDISRLLKHGASLLG
SAGAEFELQDDKSGETDPKERLARQRKQLQKKLGLDMGAAIGMDTEELFNDEDLEDACAS
STNRSQPGKSLGCHFSRNHLPAAELIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDVDTN
EKSNDSFEGEPEEKRRKTTNVVIEQPATDSKVLIDNVPDNSSLFEETQEWPLESFCDELC
NDLFNPSWEIRHGAGTGLREVLKCHGTGGGKAVGSTAEQMERQHQEWLEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMANSGVAMTVDILLKLLTEDQWEVRHGGLL
GIKYALAVRQDLIAELLPRVLPAITEGLRDLDDDVRAVAAAALIPVVDGLVQLQPAKVPF
IVDTLWNALLELDDLTASTNSIMTLLSSLLTYPQVRQCSTHQSLTVLVPRVWPFLRHTIA
SVRRAALETLFTLLSKADQSCAVWLNPIMQDMLRHIFQSCILESNQEILELIQKVWGELL
RQAPQQYVVAASCPWMGAWLCLMMQASHIPIDSNMLLEVKARLKEKGTGKTRQGSVPVKE
TVQEYIGGAETITEDPATRDYVVTRARLMAAKLLGALCSCICDPRLNSSSQELRPAESLA
QLLLFHLNSKSALQRIAVSMVICEWAGLQKECELLSSVVQPRLLVILSEQLYYDEIAIPF
TRMQNECKQLIALMADAQIDVRERINSTVFTIDQANELVTTIFSECTSSLNLKSRQFQPL
DSKRLQARSTVCETRAEWQQLQLRVHTFTACAVVGLAMLPDKLNPIVRPLMEAARREENT
LVQGYAASNIARLLQLCAARSPCPNAKIVKNLCGSVCVDPMLTPSAACPVPPASTPAIQE
SSKASVAEKDAMHHMVNKTKGIITLYRHQKAAFAITSKRGPTPKAPKTTNNDLPLGGSIT
TETDESKKPCLIQRRGAEFCLMTVARHFSKELTKTLPYLWESMTGPLRNALDAQGFDSSQ
LLKQGDSVAQELVNSLQVLEVTAGAMSQELIPLLMEQLPLLCTCLQHPYTAVRHMAARCV
GVLSKIATMETMNVFLEHVLPWLGAIDDNTKQEGAIEALACVMEQLDVEIVPYIVLLVVP
VLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLDG
RKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHF
LRAQEYARSKAPDCCPMPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERAWLQ
HQVKKHNLVVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRII
LSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAME
ALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVSVDDVIST
SSMEEEEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITEQLSSQHSNLRDI
QHAPKLSALKQLLLDCGLGSGGAADGGTEAVVAQHRILIFCQLKSMLDIVEQDLLKAQLP
TVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENASMQSMG
TEQLLNLFTLDKNDKADKSDAASSSGKSSMKSVLDGLGDLWDQQQYENEYDLDGFMHSLK
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcaaggttggaacgtctgtttatcttactggatacaggtacaactcctgtt
acccgtaaagcagctgctcaacagttgggagatgttgttaagcttcatccacacgagctt
aataacctgttatcaaaggttttaacatacttgaggagtccaaattgggatacacgaatc
gcagcgggacaagctgtcgaagccatagtgaagaatattccagaatggaacccagctcca
aagccaaaagacgaggtgtgtgcagaagatatgtctccagaggacaactcctcagacagg
ctgagtttctacaggtttgatatctcccgtctgctcaagcatggagcatcgctgcttggc
tccgcaggtgctgaatttgagctgcaagatgacaagtcaggtgagacagatcccaaagag
cgtttggcccggcagaggaagcaattacagaagaagttgggattggatatgggtgctgcg
atcggcatggacaccgaggagctttttaatgacgaggacctggaggacgcttgtgcctcc
agtaccaacagatcacagcctggtaaaagcctgggctgtcatttctcacgcaaccatttg
ccggctgcagagctcatagattcagagtttcgtccaggcatgagcaatcgacagaagaac
aaagccaagaggatggcaaaacttgtggcaaagcagagatccagagacgtggatactaat
gagaagagcaatgacagttttgagggagagccagaggagaagcgccggaaaaccacaaat
gtagtcattgagcagccagcgactgacagcaaagtcttaattgataatgttccagataac
tccagtttatttgaggagactcaggaatggcccctggaaagcttctgtgatgaactgtgc
aatgatctcttcaacccatcgtgggagattcgtcacggtgccggcacgggattgagggaa
gtgctgaagtgtcatggtactggtggaggaaaggctgttggcagtacagcagaacagatg
gagcgacaacaccaggagtggctggaggatttggtcatcaggcttttgtgcgtctttgct
ctggacagatttggagactttgtgtcagatgaggtggttgcacctgtcagagagacatgt
gcccagactctaggtgtggcattgcggcacatggcgaacagtggcgttgctatgactgtg
gacattctgctcaagctgctaactgaagatcagtgggaggttcgacacggtggcctgctg
ggcattaaatacgctcttgctgtcagacaggatttgatcgcagagctgctgccccgggtt
cttcctgccattacagaaggcctgcgggatttggatgatgacgtccgtgcagtggcagca
gcggctttgatcccagtggtggatggattggttcagttacagcctgctaaggttcccttc
attgtggacacattgtggaatgccctgctagagctggacgatctcaccgcttcaacaaac
agcatcatgaccctcttgtcctccctgctcacttacccacaggttcgccaatgcagcacg
caccagtctctcacagtgttggttcctcgagtatggccattcctgagacacacaatcgct
tctgttcgtcgggctgccctagagaccctctttacattgctttccaaagctgaccagagt
tgtgctgtgtggctgaatcccatcatgcaggacatgttaagacacatctttcagtcctgc
atcctggagagcaaccaggagatcctagagctgatacagaaggtgtggggggagttgttg
cgacaggctccgcagcagtatgtggtggcggccagctgtccatggatgggcgcctggctc
tgtttgatgatgcaagcgtcacacatcccaattgactcaaacatgctgctggaagtgaag
gcccgcttaaaggagaagggtactggaaagactcgacagggatctgttccagtgaaggaa
acggtccaggagtacatcggtggagcggagacaattaccgaagatcctgccacgcgagac
tatgtggtgacacgtgcacgtctaatggctgcaaagctgttgggggcgctgtgcagttgt
atatgtgacccacggttgaatagctcttctcaggaactccggcctgccgagtctctagca
cagcttttactattccatctcaattccaaatcggccctgcagcggattgcggtttccatg
gtgatctgtgagtgggcaggccttcagaaggagtgtgagctgctgtccagcgtggttcag
ccccgattgctggttattctctcagagcaactgtactacgacgagatcgccattcctttt
acccgcatgcagaatgaatgtaaacagctcatagcgctgatggctgatgcccagattgat
gtgagagaacgaatcaactccactgtattcaccattgatcaagctaatgagctggtgacc
accatcttctccgaatgcacctcctctctgaacctcaagtcacgtcagttccagccgctg
gacagcaagaggctgcaggctcgttccactgtgtgcgagaccagggccgagtggcagcag
ctgcagctgagagttcataccttcactgcctgcgctgtggttggactggccatgttgccg
gataaactcaatcctattgtcaggcctctgatggaggcggcccgtcgcgaagagaacacg
ctcgtccagggttatgcggcctccaacattgcccgcctgctacagctgtgcgctgccaga
tctccctgtccgaatgccaagattgtgaagaatctctgcggctcggtgtgtgtagaccca
atgctcacccctagtgctgcatgtccggtcccaccagccagcactccagcaatacaagag
agcagtaaagcatctgtggcagagaaggatgcgatgcatcacatggtgaacaagacaaag
ggcatcatcaccctttaccggcatcagaaagcagcatttgccatcaccagtaagagagga
cccacacccaaagcccctaaaactaccaacaacgaccttcccctcggaggcagcattacc
acagaaacagatgagagcaagaagccatgtcttatccagaggagaggggcagagttctgc
ttaatgacagttgccaggcatttcagtaaggagttgacaaaaactttgccatatctttgg
gagtccatgactggtccgctgaggaatgcgctggatgctcagggatttgattccagccag
ttgttgaagcagggagactctgttgctcaggagcttgtgaattctctgcaggtgctggag
gtcacagcaggagccatgtcccaagagctcatccctttgctgatggagcagttgcctctc
ctgtgcacctgtctgcagcatccatacacagctgtacgtcacatggctgcgcgctgtgtg
ggcgtgctcagcaagatcgctactatggagaccatgaatgtgtttctggaacatgtgctt
ccctggttgggtgctattgatgacaacaccaagcaggagggagccatcgaagccctggct
tgtgtaatggagcagttggatgtagagattgtgccctacattgtgctgttggtggttcct
gtgttgggccgtatgagtgacccctgtgacagcgtgcgattcatggccacacagtgcttt
gcaaccctgatccgactgcttcctcttgaggctggaatcccagacccgccgtctatgtct
gaagatctcattcgacagaaggccagagaacgacacttccttgagcagctgcttgatgga
agaaaactggaaaattataagattcctgtgcccatcaaagcagagctcaggaaataccaa
caggatggagtgaactggttggcatttttgaacaagtacaagcttcatgggatcttgtgt
gatgatatgggtcttggaaagactctgcagtccatctgtattctggcaggcgatcatttc
ctcagggcccaggagtacgccaggtcaaaggctccagactgttgccctatgccctccata
gtagtgtgtccgcccaccctgacgggacactgggtggatgaggttggcaagttctgctct
aaagagtacctcaatcctctgcactatactggcccccctacggaaagagcatggttgcag
caccaggtgaagaaacacaatctcgttgttgcctcatatgatgtcgttaggaatgacatt
gactttttcagggatattaaatttaattactgtatccttgatgagggtcatgtcattaag
aatggaaagaccaaactttctaaagcgatcaagcagttaactgccaactacagaataatc
ctctcaggaactcccattcagaacaatgttctggagttgtggtctctatttgacttcctg
atgccaggctttcttggtaccgagcgtcagtttgctgctcgctatgggaagcccatcctc
gccagtcgagatgcaaaaagttcctcacgcgagcaggaagcaggtgtgctggcaatggaa
gcgctgcatagacaggttctgcccttcttactgaggagaatgaaggatgatgtgcttcaa
gatctgccccctaagatcatacaagattactactgcaacctcagtcctctacaggttcaa
ctgtacgaggactttgcaaagtctcgtgcaaaggtgagcgtggatgatgttatttccacg
tcgtctatggaagaggaggaagagaaacccaaattaaaggccaccggacacgtcttccag
gctctacagtatttgaggaagctgtgtaatcacccagcactggtgctgacccctcaacac
ccagagtacaaacacatcaccgaacagctgagcagccagcactccaacctcagagacatt
cagcacgccccaaaactctcagccctcaaacagctgctgttggactgcggactgggttct
ggcggagcggctgatggcggcacagaggctgttgtggcccagcaccgcattctgatcttc
tgccagctgaagagcatgctggacatcgtggagcaggatttgctgaaagcacagctgccc
accgtcacctacctcaggctggatggaagcgttcaggccggcctcagacactccatagtc
tctagattcaataatgacccgtccatagatgttctgctgctcactacacatgtgggtggg
ctgggtttgaatctgaccggagcagatactgtggtgtttgtggagcacgactggaacccc
atgagagacttgcaagccatggatcgagctcacagaataggacagaaacgtgtggtgaat
gtgtatcgtctcatcacacggggaacactggaggagaaaatcatgggtctgcagaaattt
aagatgaccattgcaaatacagtcatcagccaagagaacgccagtatgcagagcatgggc
acagaacagctgctcaacctcttcacactggacaagaatgataaagcagacaagagcgat
gcagcgtcgtcgtctggtaaaagcagtatgaagtctgttctggatgggcttggtgacctg
tgggaccagcagcagtatgagaacgaatacgacctggacggcttcatgcactcgcttaaa
tga
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