Garra rufa (doctor fish): 141326257
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Entry
141326257 CDS
T11039
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
grf Garra rufa (doctor fish)
Pathway
grf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
141326257 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141326257 (ercc6)
03400 DNA repair and recombination proteins [BR:
grf03400
]
141326257 (ercc6)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141326257 (ercc6)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
141326257 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
SesA
Motif
Other DBs
NCBI-GeneID:
141326257
NCBI-ProteinID:
XP_073691082
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All DBs
Position
2:complement(21919600..21940248)
Genome browser
AA seq
1396 aa
AA seq
DB search
MPVEGNKDQPLAPLSSPVSALTPGVQEDNGLSIPGSSKEEPAATCPENVGSQNPRKSQAL
LQINRQEIQSVDRNAQADELQGLGVDVYDQDVLEQGVLQQVDRAIHEANQAAAKAEAEKE
YESVLDDVRSCTTALKHINKILEQLAPHAASSKDISRKIESVKRQKENKEKQLKKIRAKQ
KRLQAVLDGEDIQKLEAELLIEDDEEPGPSTLGSMLMPAQESEWDELIRTGHMTPFGSRI
PQKQEKKEPRKVMLSENSGFDKYLDDQAILADSRKRPILKKKITKKHLGPTTQGKEQKNI
SLSSKDKKLQKRMRKLQRTALKAHPKARPKVEKEPPRARRKKGDGEQMSDSEGSEYVPSD
ELMDPEEPERDDDDELWVDEDDEYQLKPYKKKNQAKTRKPKKKEEDESDEYIPSSSEDED
SQKGGKVKKCKDDGDIECYRQRIRKWKRQRLREKEAKREAGEDESEESDAEFDEGFKMPG
FLWKKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNY
RYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVAGHGIL
ITSYSYIRIMQDYIQKYDWHYVILDEGHKIRNPNAGVTMACKQFRTPHRFILSGSPMQNN
LKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPY
LLRRMKADVKANLSLPDKSEQVLFCRLTEDQRQVYQTFLDSKEVYQILNGDMQVFSGLIA
LRKICNHPDLFTGGPRLLRGIPHEQLTEEEHFGYWKRSGKMIVVESLLRLWFKQGHRVLL
FTQSRQMLEILEVFVRENGFSYLKMDGTTTIASRQPMIAQYNQNKDIFIFILTTRVGGLG
VNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQ
FLTNRVLKDPKQRRFFKSNDIYELFTLSNPDGSQGTETSAIFAGTGSDVQVPKRHKTSRP
SQETLRPSSQSSAFCVEDQDTKSLSGNRNTTSVNGLLNNNASGSQNNNLEPHSTVDRLTN
GTSKDHSPANSPQKHREKKKHCETPEKDTLHKRKHRKRKHSEDARFDGCRISHLVKKRRY
KKEEKEEEEDKNEKKSDDYVLAKLFKKSGIHSVMKHDTIMEASNPDYVLVEAEANRVAKD
ALRALKVSRQNCRVAFSRGSTTATPPPVKRRFGQKKNSLLSQSSGTTAKAAEKCKDADII
KKSVVKKPGSVAHFSGDGAQEETGSLSSSSLLARMKARNHLNQPQRQEDEEEEEREPTAT
HATPTEHDELLVDLRNFVAFQAQVDGQASTKEILEYFTPRLNSTQTPVFRELLRNICEFH
RLPGQEGMWKLKADYR
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaggtaacaaggaccagcccctggctcccctatccagccctgtcagcgcc
ctaactcctggagtccaagaagacaatggcctttccatcccaggaagcagtaaggaagag
ccagcagctacgtgtccggagaatgttgggtcacagaatcctagaaaatcccaggccctg
ctccagatcaaccgtcaggagatccagtcagtggaccgcaacgctcaggctgatgaactg
caagggttgggagtggacgtgtatgaccaagatgttcttgagcaaggtgtgttgcagcag
gtggacagggccattcatgaggccaaccaagcagcagccaaagctgaggctgagaaagaa
tacgaatccgttctggatgacgtcaggtcatgtacaactgctttgaaacacatcaacaaa
attttagagcagttagcccctcacgctgcctcaagcaaggacatcagtcggaaaattgag
tctgtcaaacggcaaaaagaaaacaaggagaagcagttaaaaaagatcagagccaagcag
aagagattgcaggctgttcttgacggagaggatatccagaagcttgaggcagaattattg
atcgaggatgacgaagaaccaggcccatccaccttgggcagcatgcttatgccagctcag
gagtccgaatgggacgagctcatccgcacaggtcacatgaccccgttcggttcacggatc
cctcagaagcaagagaagaaagagcctcgaaaggttatgcttagtgagaactccggattc
gacaagtacctcgatgaccaagccattttagcggatagcagaaagaggcctatcttaaaa
aagaagatcactaaaaagcacttaggaccaaccacgcaaggcaaagagcaaaagaacata
tccctctccagcaaagataagaagctccaaaagcgaatgcgtaagctccagaggacggct
ctgaaagctcatcccaaagccaggcccaaggtagagaaggaaccaccccgagccaggagg
aagaaaggcgatggagagcagatgtccgacagcgagggttcggagtacgtcccgagcgat
gagctgatggatcctgaggaaccagagagagatgatgatgatgagttgtgggtggatgaa
gatgatgaataccaactgaaaccatacaagaagaagaaccaggccaaaaccaggaagccc
aagaagaaggaggaggatgagagcgacgagtacatccctagcagctcagaggacgaagac
tctcagaaaggcggaaaagtcaaaaaatgtaaagatgatggagatattgagtgttaccgg
caaaggattaggaagtggaaaaggcaacgacttcgggaaaaagaggcaaagcgagaagca
ggagaagatgagtctgaggagagtgacgcagagttcgatgaaggatttaaaatgcctggt
ttcctctggaagaaactcttcaagtatcagcagacaggtgtcaggtggatgtgggaactg
cactgccagcaagcaggaggcattctgggagacgagatgggcctgggcaaaactatccag
ataattgccttcctggcaggcctgagctacagcaagctaaaaacacgtggctccaattac
aggtatgctggtttggggcccacagtcattgtgtgtccggctacagtcatgcaccagtgg
gtaaaggagttccacacatggtggcctccattccgtgttgctgtcctccacgacacgggc
tccttcaccagcaaaaaggagaagctcatcccggagatagtggccggtcacggcatcctc
atcacttcctactcatacatccgcattatgcaagattacatccagaaatacgactggcat
tacgtcatcctggatgagggccacaaaattaggaatccaaatgctggggttactatggca
tgcaagcagttccggacaccccaccgttttatcctctctggctcacccatgcagaacaac
ctcaaagagctgtggtcgctttttgactttgtgtttccagggaagctggggactctgccc
gtcttcatggagcagttctctgtacccattaccatgggaggatactctaatgcgtctcca
gtgcaggtccagacagcctataaatgtgcttgtgttcttcgtgacacaattaacccttac
ctcctgagaagaatgaaggctgatgtgaaagcaaacctctctttacctgacaaaagtgaa
caggtcctgttctgcagattaactgaagatcagcggcaggtttaccagacttttttggac
tccaaagaggtttatcagattctgaatggagacatgcaggttttctcaggcctcatagct
ctgaggaagatctgcaaccacccggatctgttcacaggcgggccgcggttgctccgaggc
atccctcatgagcagctgaccgaggaggagcacttcggttactggaaacgttcggggaag
atgattgtggtggagtcactactgcgcctgtggttcaaacagggacacagagttctcctt
ttcacccaatccaggcagatgctggagatcttggaggtgttcgtgagggagaatggcttc
tcgtatctcaaaatggacggcactactaccattgcgtccagacagcctatgatcgctcaa
tacaaccagaacaaagacatcttcatcttcatcctgacaacaagagttggaggtttggga
gtcaatctgactggagcaaatagggttgtaatctacgacccagattggaaccccagcaca
gacactcaggctcgtgagcgtgcctggaggattgggcaaaagcagcaggtgacggtttac
aggctgctgacagctggaacaattgaggagaagatttaccacagacaaatcttcaaacag
tttctcaccaaccgagtgctaaaagatcccaagcagcggcggtttttcaagtctaatgac
atttatgaacttttcacactgagcaatcctgacggctcccagggaacggaaaccagtgca
atatttgcaggcacagggtcagatgtgcaagttccaaaaagacacaagacctctcgtcct
tctcaggagaccttaagaccatcgtctcaatcatctgcattttgcgttgaagaccaagat
accaaatctctatcaggaaacagaaacactacctcagtcaacggtctcttaaacaacaat
gcttctgggtcgcaaaacaataaccttgaacctcattccactgttgatcgtttgacaaac
ggcactagtaaagatcattctcctgcgaacagccctcaaaagcacagagagaagaaaaaa
cactgtgaaacaccagagaaggacacattacacaagcgcaagcatagaaagcgcaagcac
tctgaagacgccaggtttgacggctgtcgcatttctcacctggtgaagaagcgaaggtat
aagaaagaggaaaaggaagaggaggaggataaaaatgaaaaaaagagtgacgattatgtt
ctagccaagctttttaaaaaatctgggatacacagcgttatgaagcatgacaccatcatg
gaggcatcgaacccggactatgtgcttgtggaagctgaagccaatagggttgcgaaggat
gccctgagagctctgaaggtctccagacaaaattgcagggttgctttctcaagaggatct
acaacagcaaccccacctccagtcaagagacggtttggacaaaagaaaaactcacttctg
tcccagtcatctggaacaacggcaaaagcagcggagaaatgcaaggacgcagatattata
aagaagtcagtggtaaagaagccaggatctgttgctcacttcagtggtgatggagcacag
gaggagactggttctctctcctcatcctctctccttgctagaatgaaggctaggaatcat
cttaatcaacctcagagacaagaggatgaggaagaggaagagagagagcctacagccacg
catgctacccctactgaacacgatgagcttttagttgacctgaggaactttgtggccttc
caagctcaggtggatggccaggcgagcaccaaggagatcctagagtacttcactccaaga
ctcaattcaacacaaacaccagtcttcagagaactgctgaggaatatctgtgagttccac
agacttcctggacaggaagggatgtggaagcttaaagctgactacaggtaa
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