Garra rufa (doctor fish): 141326358
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Entry
141326358 CDS
T11039
Symbol
rrh
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
grf04030
]
141326358 (rrh)
G protein-coupled receptors [BR:
grf04030
]
Rhodopsin family
Vision
Opsin
141326358 (rrh)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_2
FtsK_4TM
Motif
Other DBs
NCBI-GeneID:
141326358
NCBI-ProteinID:
XP_073691204
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Position
2:31530924..31536810
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AA seq
341 aa
AA seq
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MIMCDKEMASGFLNGSAETVYGEESAFTQTEHNIVAAYLITAGVVSLSSNIVVLLMFVKF
RELRTATNAIIINLAFTDIGVAGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASI
GLLTVVAIDRYLTICRPDIGQKLTSVSYMLLILAAWLNAVFWSSMPIVGWAGYAPDPTGA
TCTINWRNNDTSFVSYTMTVITVNFIIPLAVMFYCYYNVSVTVKRYKASNCLDSINMDWS
DQMDVTKMSIIMIVMFLAAWSPYSIVCLWASFGDPKTIPAPMAIIAPLFAKSSTFYNPCI
YVIANKKFRRAITGMLRCQTRQRITISNQLPMTASSAQLNP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtgtgacaaagagatggcatctggattcctgaatggttctgctgagaccgta
tatggtgaagagagcgccttcacacaaaccgaacacaatattgtcgctgcatatctcata
accgcaggagtggtcagtctgtctagtaacattgtggtactgctgatgtttgtgaagttc
agagagttacgaactgccacgaacgcgatcatcattaatctggctttcaccgatattggc
gtagctggtattggctatcccatgtcagcggcctcagacctgcacgggagctggaaattt
ggttacacaggttgccagatctatgctgccttgaatatattcttcggtatggccagtatt
ggactgcttactgtggttgctattgaccgatacctcaccatatgtcgacctgacatagga
cagaagctgacatcagtatcatacatgcttctgattttggctgcttggctgaatgctgtg
ttttggtcgtctatgcccatcgttggttgggcaggatatgctcctgaccccacaggagcc
acctgcaccatcaactggaggaacaatgacacgtcttttgtgtcctacacaatgacggtg
atcactgtcaacttcattattcctctggcggtcatgttctactgttactacaacgtctca
gttactgtgaagaggtacaaagccagtaactgcctagacagcatcaacatggattggtca
gatcagatggatgttaccaagatgtctattataatgatagtgatgttcctggctgcctgg
tctccatattcgattgtgtgtttgtgggcatcattcggtgaccccaaaacgattccagct
ccaatggccataattgccccactctttgccaagtcctccaccttttacaatccttgcatc
tatgtcatcgccaacaagaagttcaggagagccatcactggaatgctacgatgtcaaaca
cgtcagagaatcactattagcaaccagcttccaatgacggcatcatcagcacaacttaac
ccctaa
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