Garra rufa (doctor fish): 141326478
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Entry
141326478 CDS
T11039
Symbol
xpo5
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141326478 (xpo5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141326478 (xpo5)
03036 Chromosome and associated proteins [BR:
grf03036
]
141326478 (xpo5)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
141326478 (xpo5)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
141326478 (xpo5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
141326478
NCBI-ProteinID:
XP_073691324
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Position
2:complement(44410436..44527821)
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AA seq
1202 aa
AA seq
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MAEPIRALCDELIKAVNVMMEAESSQTYRLEALKFIEEFKEKSPFCVECGLQLAEKSQTA
VVRHFGLQILEHVVKFKWNDMAPEEKLQLKNCTMGLLSNGTHPILQEECHVKDALSRIVV
EMIKREWPQHWPDMLKEMEALTAMGDTQTELVMLVLLRLAEDVITFQTLPTQRRRDIQHT
LTQNMDSIFTFLLDILQLHVNEYKKLKCIAGQELKAKAHWRVGVATLNTLAGYIDWVALV
HITNDNCRLLEIFCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMVLFDEVAMNYILS
AAQSAGGAALCNQSSGGIVERRYTFLKRLCQVLCALGSQICSLVGSDIDVQVPVNLDKYT
EALFAFTTHPSQFLRSSTQMTWGNLFRHEILSKDPVVGQMAIKYLRAARINLVKTGFPSK
NDCPGCEFSRVDFDSDEDFSCSFNSFRAQQGEAVRLACKIVPFEAFQTAKEWVQYQICTP
IDTGNTTPVQWDAMTFFTESVFGQLFKILEKEKIPIDEGMELLQMVVNYETRDPLILSCV
LTIISTLFPFVTHQTHFLPQVLFKIFPSITFELVEECKAPRTRAVKNVRRHACSSIIRIC
RDYSDLMLPCFDMMYEHAKRLFSDELLLTQMEKCALMEALILISNQFKDYNKQKAFLKEL
IAPVTAQWLSEDMRSVLWDPAMFLAYVGADQVISDPEKEDQMGINRSRISFCVNTILGVV
KRARWPANTEEAKAGGFVVSTTSDGAPIYRNPCVEPLQALLPNLFALIRTQNSLFLPENI
NRLSKTFTGVYDIMDVEKNFALGIPQPVLDAYDTSAYRSIVERMQGFFSSLYDNCYHVLG
NAGPCMQQDFYAIEGLAEQIVGSAFIHLDSVPDHRLRSLVRLFMKQLVISCPHNYYDSLI
CPLLGPLFAYLLQRLNFRWQIINQRTSLCGQEEEAYEENHVTQEVVEEQLLRLVTREVMD
LLSVTCITRKNPELSANKEETEGDEEMVSMDSSQGIQMNTPSDELSELGKCLLQSEEIYM
TLLTICFNSLSWKDTINCQRSASVFCWTLLKQVLGCNLLPEAVTWLYTSVLKGLQMHGQH
EGCNAALTQLALLIYESLRPRYTELRLIMNQIPDIHVEALEQFDQKTIQCTVSKAGEKKK
KEQFKRLIAGTVGKPLGQQFKKEVHIRNLPSLFKKPKPTKDMLENTDTAGLIALFSSDHD
NC
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgatacgtgcgttgtgcgatgagcttataaaggcagtgaatgtgatgatg
gaggcagaatcaagccaaacataccgcctggaggcccttaagtttattgaagaatttaaa
gagaaaagtcccttctgtgttgaatgtggtcttcagttagcggagaaatcgcagactgct
gtggtcagacactttgggctgcagatactggagcatgtagtcaagtttaagtggaatgac
atggcgccagaagaaaagctccagctgaaaaactgcactatgggcctgttgtcaaatggt
acacatccgattttgcaagaggaatgtcatgttaaggatgccctctcacgcatagtagtt
gagatgatcaagagagagtggccacagcactggcctgacatgctcaaggagatggaggcc
ctgacagccatgggggacactcagacggaacttgtaatgcttgtcctactgcggttagct
gaggacgtgatcacatttcagacattacccactcaaagacgacgagatatccagcacacc
cttacacagaatatggacagcatattcaccttcctgcttgacatactgcagcttcatgtg
aatgagtacaagaagttgaaatgcattgctggtcaggagttgaaggcaaaagctcactgg
cgagttggtgtggccactctcaatactctcgctggctacattgattgggttgctctggtc
cacatcaccaatgataactgccgtcttttggagatcttctgcctgttgctgagtgaacct
gagcttcagttagaggctgcagagtgtctgctaattgccattagtaggaaaggaaagtta
gaggataggaagccatttatggtactctttgatgaagttgccatgaactacatcctgtct
gctgcacagtcagcgggtggtgcagctctgtgtaaccaatcatcaggtggcattgtggaa
agaagatacacttttttgaagaggctgtgtcaggttctctgtgccttgggtagtcaaatc
tgctctctagtgggttcagatatcgatgtacaagttcctgttaacctggataaatacacg
gaagctctttttgccttcactacccatcctagccagtttttgaggtcgtccacacaaatg
acctggggaaacctattccgacatgaaattttatcaaaggatcctgtagttggccaaatg
gcgataaaatatttaagagcggcaaggatcaatcttgttaaaactggatttccctccaag
aatgattgtccaggttgtgaattctccagagtggactttgatagtgatgaagatttcagc
tgctcctttaattcttttagggctcagcagggggaagcagttcgtctggcttgtaaaatc
gtcccatttgaggcatttcaaactgcaaaggaatgggtgcagtatcaaatctgcacacct
atagatactggaaatacaacaccggttcagtgggatgccatgactttcttcactgaaagt
gtgttcggacagctcttcaaaatccttgaaaaggagaaaattcccatagatgagggcatg
gagctgctgcagatggttgtaaactatgagacaagagatcctctcattctgtcctgtgtt
cttaccatcatatccactctctttccctttgttacacaccaaactcacttcctgcctcaa
gtactctttaagatatttccttccatcacatttgaattggttgaagaatgcaaggcaccc
cgaactcgagctgttaagaacgttagaagacatgcctgttcttccatcattaggatatgt
cgagactattccgatttaatgctgccgtgctttgacatgatgtatgagcatgcaaagagg
ttgttctcagatgagctgctgctgacacaaatggaaaagtgtgctcttatggaagccctg
atactaatcagcaatcagtttaaagactacaacaagcagaaagcctttctgaaggaactc
attgcgcctgttactgcacagtggttgtcagaggacatgagaagtgtgttatgggatcct
gctatgttcttggcatatgttggtgctgatcaggtgatcagtgaccctgaaaaagaggat
cagatgggtatcaacaggtcacggattagtttttgtgtaaacaccatacttggggttgta
aagcgtgctcgttggcctgctaatactgaggaggcaaaagcaggaggctttgtggtcagc
acaacctctgatggggcccccatctacagaaacccttgtgtggagcccttgcaggccttg
ctgcccaacctttttgctcttatcaggacccaaaatagcttgttcttgccagagaacatc
aaccgacttagcaagacttttactggggtctatgatattatggatgtggagaagaatttt
gctctaggaattcctcaacctgttttagatgcctacgacacttcagcatacagaagcatt
gttgaacgcatgcaaggcttcttctcatcactctatgataactgttaccatgtgcttggg
aatgcaggtccctgcatgcaacaagacttctatgcaatagaaggcttagcagagcagatt
gttggttctgcattcatccatctagacagtgttccagatcacaggctccgctccctagtt
cgtctgttcatgaagcagctggtcatatcctgtcctcataattattatgacagcctcatc
tgtcctttgctgggtccactgtttgcctatctgctgcagagactgaactttcggtggcag
atcatcaaccaacggaccagtctgtgtggtcaggaggaggaggcctatgaagagaaccat
gtgactcaggaagtggtggaagagcagctgttgcgtttggtcacacgagaagtaatggac
cttctaagtgtgacttgcattacaagaaagaatccagagctatctgcaaacaaagaggaa
acagagggtgacgaggagatggtgtcgatggactcctcacagggaattcaaatgaataca
ccttcagatgagctctcagaattgggcaagtgccttctgcagagtgaggagatatatatg
actctcctgactatatgttttaactccctttcctggaaggacactataaactgtcaacgg
agtgctagtgtgttctgctggactttgctaaaacaggtgcttggctgtaacctgctcccg
gaggctgtgacgtggctgtacaccagtgtactgaagggtctgcagatgcatgggcaacat
gaaggctgcaatgcagcactaactcagctggccttgctcatctacgagtctctaaggcct
cgatacactgagctgcgtttaatcatgaatcagattcctgatatccatgttgaggccctg
gagcagtttgatcagaagaccatacaatgcactgtatcaaaggctggagagaagaaaaaa
aaggagcagtttaaaaggctcattgcaggcactgttgggaaaccccttggacagcagttt
aagaaggaagtgcacatccgaaaccttccatctctgtttaagaagccaaagcctacgaaa
gatatgctggagaacactgacactgcaggtctgattgctctgttctcctccgaccatgac
aattgctaa
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