Garra rufa (doctor fish): 141330831
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Entry
141330831 CDS
T11039
Symbol
myom1b
Name
(RefSeq) myomesin-1
KO
K24495
myomesin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141330831 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141330831 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
141330831 (myom1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_J_second
Tissue_fac
C2-set_3
Ig_CD22
Toxin_7
Motif
Other DBs
NCBI-GeneID:
141330831
NCBI-ProteinID:
XP_073691695
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All DBs
Position
3:4251724..4318153
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AA seq
1295 aa
AA seq
DB search
MHTPEFVIKPRSHTVWEKQCVRLHCTISGWPEPRVVWYKNNVSIDPMSKPGKYKVESSYS
VHSLEINKCDFDDTAQYRVSAMNSKGEVSAFASVVVKRFKGEIDDSLPSPRLLPCLEYGI
TFETHIVEKFGVSFGREGETMSFGCSVIIYPSLQRFQPEIEWYRDDKLLVPSKWVQMHWS
GDRATLTLTHLNKEDEGLYTIRVITKSGFETHSAYVFVRDGDAEVAGAPGAPLDVHSLDA
NKDYVIVSWKQPAVDGGTPILGYFVDRCEVGMTHWAQCNDTPVKFARFPVTGLVEGRSYV
FRVRAVNKAGMSHPSRVSEPVAAMDPADRTRKGPSAPWTGQIIVTEEEPVEGVVPGRPRD
LAVIEATKNYVVLSWKPPGEKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLA
EGKSYRFRVRCCNSAGVGEPSEPTETTTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASR
DAKELVGYYIESSISGSNTWEPCNNKPVKGTRFICHGLTTGESYVFRVRAVNAAGISEFS
QESEAITVKAAIASPAPPYGISVLECVRDSMVLAWKQPTFIGGADITGYFVDYREVIGGV
PGKWHEANIKSVSERAYRVSELKENMLYQFQVRAANMAGVGIPSMPSETFKCEEWTIAVP
GPPHDLQVQEVRKDSLVLLWKSPVYQGRDPVNGYYIDIKEADADFEMWRGVNEKATDKTF
MKIKNLKEGETYVFRVRAQNKAGVGKASDPTEAVEAVTKPGTNEIVVNVDDDGVISLNFE
CSDLTADSKFVWSKNYEEMTEPDRMTLETKGNKSKAIFKTPSEEDLGIYSCFVTHTDGAS
ASYTLSEETLKELLKISHDHKFPIIPLKTELAVELLEKGRVRFWLQAEKISANGKVEYVF
NDNVIHQGEKYKMNFDKNTGIIEMFMESLGKEDEGTFTFQLQDGKATNQSSLVLIGDVFK
QLQKESEFQKKEWIRKQGPHFVEYLGYEVTPECCVRLKCKVANMKKDSVALWYKDGREIK
VNEKLDFSEGMLTLEIAQISRKDAGIYEVVLKDDRGKDTSTLNLTDQGFKDLMNHVFSVI
ANSSTPLKIQSTEEGIRLYSFVSYYNDELHVTWHHKDAAIAFTERIKSGVVGEQLWLQIS
EPTEKDKGKYAIEFFDGKGGLRRTVELAGQAFDDAFAEFQRLKAAAIAERNRARVAGGLP
DVVTIQEGKSLNLTCNIWGDPVPEVTWLKNEREMVSNDHYILKFESGKFASFTITSVNTS
DSGKYSILVKNKYGTESGDFTVSVFIPDEEPVKKK
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcacactcccgagtttgtgatcaagccacgttcccacactgtttgggaaaaacagtgt
gtgcggctgcactgtaccatctcaggatggcctgaaccacgcgtcgtgtggtacaagaac
aatgttagcattgatccaatgtccaaaccagggaagtacaaagtggagagcagctacagc
gtccactccctggagattaacaagtgtgacttcgatgacaccgcacagtatcgtgtctct
gccatgaacagcaagggcgaggtctctgcttttgcctctgttgtcgtcaaaaggttcaaa
ggagaaattgatgattctctgccatctcccagactcctaccttgtctggagtatggcatt
acattcgagacacacatcgtggagaagtttggtgtgtcttttggacgtgagggtgagacg
atgagtttcggctgctctgttatcatctacccatcactgcagcgcttccagccggagata
gagtggtacagagatgataaactgctggtgccatcaaaatgggttcagatgcactggagc
ggcgacagagcgacactcactctcacacacctcaacaaggaggatgaaggactctacaca
attcgcgtcatcaccaaatctggctttgagacacattctgcatacgtttttgtcagagat
ggtgatgcagaggttgcaggagctcctggtgctcctttagatgttcatagtctggacgcc
aataaggattacgtcatcgtttcctggaaacagcctgctgtggacggaggaactcctatt
ttgggctactttgttgacaggtgtgaagttggcatgacccactgggcacaatgcaatgac
actccggtgaagtttgcccgtttccctgtaactggtcttgtggaaggacgcagctatgtg
tttcgagtgcgtgcggtgaataaggcgggcatgagccatccgtcccgtgtgtctgaacca
gtagctgctatggaccctgcagaccgcacaagaaaaggtccctctgctccttggactgga
cagatcattgtaactgaggaggagcctgtggagggagtggttcctggcagacctcgggat
ctcgccgtcattgaggccactaaaaactatgtggtgttgagctggaagcctccaggcgaa
aagggccatgaaggggttatgtattacgtggagaagtgtgtatctggcacagacagctgg
cagcgagtcaacactgaaatcccagtcaaatctccacgttttgctctttttgatctggcc
gagggaaagtcttatcgcttccgcgtccgctgctgcaactcagccggtgttggtgaacca
tcagaaccgaccgaaaccactacagttggagacaagctggatatcccatcagcccctggc
cgtgtggttcctacccgcaatacagacacatctgtagtggtttcatgggaagcgtcacgt
gatgctaaagagctggtgggctactacattgagagcagcatttcagggagcaacacttgg
gagccatgcaacaacaaaccagttaaaggcacaaggtttatctgtcatggcttgaccaca
ggcgagagttacgttttccgagtaagagccgtcaatgctgcgggaatcagtgaattctct
caagaatcagaagccattacagttaaagctgctattgcttcacccgccccaccctatggg
atctctgtgttggagtgtgtgcgggactcaatggtactagcctggaagcaacccactttc
attgggggcgctgacatcactggttacttcgttgattaccgtgaggtcatcggtggagtc
ccaggaaaatggcacgaggcgaatattaagtctgtcagtgagagagcttatagagtttca
gagctgaaggaaaacatgctgtaccagttccaggtacgtgctgccaatatggctggtgtg
ggcatcccatctatgcccagtgagacattcaagtgtgaggaatggactattgctgtaccg
ggaccaccccatgacctccaagtgcaggaggtgcgtaaggactctctggttttgctctgg
aaatcgcctgtctaccagggtcgtgatcctgtcaatggatactacattgatatcaaagag
gctgacgcagactttgagatgtggagaggagtcaatgagaaagctactgacaagacattc
atgaagatcaagaatctgaaagagggggagacgtatgttttccgtgtgcgcgctcagaac
aaggctggtgtaggaaaagcatcagatccaacagaagcagttgaggcagtgactaaacca
ggtactaatgaaatagttgtgaatgttgatgatgatggcgtcatttcactgaattttgag
tgctctgacctcaccgctgactccaaattcgtctggtccaagaactatgaggaaatgaca
gaacctgaccgcatgaccttagagaccaagggtaacaagtccaaagccatctttaaaacg
ccttcagaagaagacttgggtatctactcttgttttgtgacacataccgatggagcctct
gccagctacaccctctctgaggaaactcttaaagaactcctgaagatcagccatgaccac
aaattccccatcatccctctgaagacagagctggccgtggagctgctggagaagggcaga
gttcgcttctggttgcaggctgaaaagatctctgccaatggaaaagttgaatacgtcttc
aatgacaatgtgatccaccagggagagaaatacaagatgaactttgataaaaacactggc
atcattgagatgttcatggagtctctgggcaaagaggacgagggaacgtttactttccag
cttcaggacggcaaagccactaatcagtccagtctagtgctgatcggagatgtgttcaag
cagttacagaaggaatcagagttccagaagaaagaatggataagaaagcaaggtccacac
ttcgtggagtatcttggttatgaagtcacaccggagtgctgtgtcagactgaagtgtaag
gttgctaatatgaagaaagactctgtggcgctgtggtataaagatggacgagagattaag
gtcaatgagaaactggatttctctgaaggaatgttgaccttggagatcgctcagatctcc
agaaaggatgctggtatatatgaagtagttctgaaggacgacagaggcaaagacacctcc
accctcaacctcaccgaccaaggattcaaagacctgatgaaccatgttttcagtgttatt
gcgaactcctccactccactgaagatccagagcacagaggagggaatcaggctttactcc
ttcgtcagctactacaatgatgagctgcacgtcacctggcatcacaaggacgctgcgatc
gcattcaccgagcgcattaagagcggagtagtgggagaacagctgtggctgcagatctct
gaacctactgagaaagataaaggcaaatacgccattgagttcttcgatgggaaaggaggt
ttgcgcagaactgtggaactggctggacaagcatttgacgatgcattcgctgaatttcaa
agactcaaggctgcagctattgcagagagaaatcgtgctcgtgtggcaggtggtctgcct
gatgttgtgaccatccaagagggcaagtctttgaatctgacctgcaatatctggggcgac
cctgtacccgaggtcacttggctgaagaatgagcgtgagatggtttccaacgatcactat
attctgaagtttgagtctggcaagtttgccagtttcaccattacaagcgtcaacacatct
gactcgggcaaatacagcatcctggtaaagaacaagtacggtacggagagcggcgacttc
accgtaagtgtcttcatcccagatgaggaacccgtcaagaaaaaataa
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