Garra rufa (doctor fish): 141330844 Help Entry 141330844         CDS       T11039                                  Symbol synpo2a Name (RefSeq) synaptopodin-2   KO K24066   synaptopodin-2 Organism grf  Garra rufa (doctor fish) Pathway grf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:grf00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     141330844 (synpo2a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:grf04990]     141330844 (synpo2a) Domain-containing proteins not elsewhere classified [BR:grf04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    141330844 (synpo2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 Motif Other DBs NCBI-GeneID:  141330844 NCBI-ProteinID:  XP_073691712 LinkDB All DBs Position 3:6158155..6185075 Genome browser AA seq 1583 aa AA seqDB search MGTGEFACVTLRGGAPWGFKLHQSSQDPQHPIQVLEIEDGSPAAVAGLCENDELVSVNGK PCSNLSLSDAIDLTEASADCLQLLVKRCCSQAQESFEMVSTTFRIPSPSRPHEPQELYTS ESQDEAYYGETDSDGECAVGTRLVRTQLQIPASRNKSSDTNAQGAGDTSLDVTPGSVVEL QLSLSKTTLEEPGCTSLGSACGVVGDVYQRKTDESVNYTTTTFTPGNPLYVPRQDRQPLG QRGVLVSKPPALPGQVEVTVQQLSESSSGKEGAEAIERLDSGGEEGGHIEEAPTSSSVSF GLPSEEWDSESEREFNKPNKHRARHARLRRSESLSDKHVKEAKSKCKRIALLLSAPAPNP NNKGVLMFKKHRQRAKKYTLVSYGTGEDEPDYKDDEDDGEEHTVEFTVLATSETEIDEDF FTNATGQKSIVSFDWDTGLLEIERKLDNQQGMDALPETKGKGALMFAQRKQRMDEIVAEH EEMRSKGIPVEAVPEPETHQTYQHMEEHTYMQAQETQNYMDVNLHHSISAQKQQQQYHQY QEQYYQQQQQQQQQQQQYQDYQQQLQYQQQHHQYQQQQDYQQQKIYENMQSYNQQQQCQQ QQVQQYSHHMNGMFDQQMQNEMQPLVANRSAKPFSVQNRVPAPFSSPPSAENQEQSGYSL GQGEQIASRDERISVPAIKTGILQDTRRRSASKPMFTFKESPKVSPNPALLNLLNRNDKK AGFETCPEEDYLSLGAEACNFLQSPKMKHKVPPPVAPKPHINPVSPPWSIQQETTDEPIP QQTENSVPAPAEAPVTEANAAPAPTLSEEEPTLAPVSHNISHCPEQPPPDNAWKQPESQM ELNQQPETWNEKQPQPQINSAHPVAPPVTQSDPSVRSWDPAPTQGHQQIPVSTWGPNDVQ LQVPSQNQVPSQTQPQWMAQSQGPLEVQLQVPSKTQTQPSWVTQPQTSPPSKHQPQPQPQ PHISSWAPSPNQSTPQAPWSQPHEQAQPPISVWQQGQNQAQEHPAWTQQQEFQQSPVMPH WASPPQKQPQSSWAQPQRESQPQPPWVSQAKQQEPTQPSANAWTQPQSPIQAQPPWAQQT QPPPQPTAPVQQPMNPWPPMPAQSQPHPQWGQEPASQQHPQQVINSWTPAQNQIQPPWAP TQPQAHPPWAPKPQQQASQPPVSQWAPPQSQSQPAVNVWAPQHQQSSVAQNEPQKLPPQP IKPWSPTQTSQPAPPRRMNSYTTGTKAPSPVPASSTMSPSGYGSAFEMPALRGKGAELFA KRQSRMEKYIVDSSTVQSNKARPSSPTPSLPISWKYSPNCRAPPPLAYNPIHSPSYPPGA IKQPPSSSPSTANKNKNKDKQKPAPKPLHVLDVMKHQPYQLNSSLFTYGPAAEKLAAEKE AAEKLAAQKAAEAQAQAQAQAQAQAQAQAQIQAQAIGPPNQNQQMAYNQGPPPYGFMPQQ AQQPYGMAGQSPMHDGLYHQAPSNAYQPALNSYQQHPHQVPYQQEYHPQQAYQQPPLNPY QQAPSPPYQQSSPPPYHTGPNPVYQAGPAPAFQPAPSSYVAPSYPVAPRADSASGGSIIA APKPKFSAKKSAAQVWKPGTPEK NT seq 4752 nt NT seq  +upstreamnt  +downstreamnt atgggcacgggcgagttcgcgtgcgtgacgctgcgcggcggcgcgccttggggattcaaa ctccaccagagctctcaagacccccaacatccgatccaggtgcttgagatagaggacggt agtcctgctgctgtggctggattgtgtgagaatgatgagctggtgtcagtgaatggaaag ccttgctctaacctcagtctctcagacgctattgatctcactgaggcctcagctgactgt ctacagctgcttgtcaaaagatgctgtagtcaagctcaagagagctttgaaatggttagt accacttttcggatcccttctccatccaggcctcatgagccacaggaactatacacctct gagtcccaggatgaagcatattatggggagacagacagcgatggagagtgtgctgtgggt acccgactggtccggacccaactgcaaatacctgcttctaggaataaaagttcagacacc aatgcccagggtgctggagacaccagtttggatgtaaccccgggctctgtggtcgaattg cagctctcgctctccaagaccaccctggaagagccaggctgtacttcattaggcagtgct tgtggagttgtgggagatgtgtatcaaagaaagacggatgaaagtgtcaactataccacc accacatttactccaggtaaccccctctacgtaccccgacaagaccggcaaccccttggt cagcggggtgtgttggttagcaaaccccctgctttgccaggacaggtggaggtgacagtg cagcagttatctgaaagcagttcaggaaaggagggggcagaggccattgaacggttggat tctggtggggaagaaggagggcacattgaagaagctcccacctcctcatctgtgtccttt ggacttccctcagaggagtgggactccgaatcagagagggagttcaacaagcccaacaag caccgggcaaggcacgccaggctccggcgcagtgagagcctttcagacaagcacgtgaag gaggccaagtccaaatgcaagcgcattgctctcctgctgtcggctcctgcccccaaccct aataacaagggggtgttgatgtttaagaagcatagacagagggccaagaagtatacgctt gtaagctacggtactggtgaggacgagccagattataaggacgacgaagacgacggagag gagcacactgttgagttcactgttctagccacaagtgaaacagaaattgatgaggatttc tttaccaatgccacaggtcagaaaagcattgtaagctttgattgggatactggattactt gagatagagcgcaagcttgacaaccagcagggtatggatgcactacctgagaccaagggg aaaggagctctcatgtttgcccagcgcaaacagcgcatggatgagatagtagcagaacat gaagagatgagaagtaaggggatccccgttgaagcggtgccggagcctgagacacatcaa acataccaacacatggaggagcacacttatatgcaagcacaagagacccagaattatatg gatgtaaatttacaccacagcatttcggcacaaaagcagcaacaacaatatcatcagtac caagaacagtactatcaacaacaacaacagcagcagcagcagcagcagcagtatcaagac taccagcagcagctacaataccagcaacagcatcatcagtaccaacaacagcaagactac cagcaacaaaaaatttatgaaaacatgcaatcatataatcagcaacaacagtgccaacaa cagcaagtgcagcagtattcacatcatatgaatggcatgtttgatcagcaaatgcagaat gaaatgcagccattagtcgcaaacagaagtgccaaaccgttctcagttcagaatagagtg cctgctccattttcctccccaccaagtgcagagaatcaagaacagtctgggtattcattg ggacaaggtgaacagattgcttcccgtgatgagcgtatatctgtgcctgctatcaagact ggtatcttgcaagatacaagaaggaggagtgccagtaaacccatgttcactttcaaggag tctcccaaggtttcacctaatcctgctctgttgaatctcctgaacaggaatgacaagaag gcaggttttgagacttgtccagaagaagattatttaagcttaggagctgaagcctgcaac tttcttcagtctcctaagatgaaacacaaagttccaccaccagtagctcctaaacctcac attaaccctgtttctccaccctggtctattcagcaagaaactactgatgaacccatcccg cagcaaaccgaaaacagtgtcccagcacctgcagaagctccagtcacagaggctaatgct gctcctgccccaacattgtctgaagaagagcctacgttggctcctgtatcccataacatt tcacactgtcctgaacagcctcctccagacaatgcctggaaacaaccagaatctcaaatg gagctgaaccagcaaccagaaacctggaatgagaaacaaccccagccgcaaatcaattct gctcatcctgtggcaccacctgttacacaatcagatccatctgtcagatcatgggatcca gctccaacccaaggtcatcagcagattccagtgagtacttggggtccaaatgatgtccaa ttgcaagtcccatctcaaaaccaagtcccatctcaaacacagccacagtggatggcgcag tctcaaggtcctctagaagtacaattgcaagtaccttctaaaacacaaacccagccttct tgggtaacacagcctcaaacttcacccccatccaaacatcagccacagcctcagccccag ccccatatcagttcttgggcaccaagtccaaatcagtcaacaccacaagctccatggtct cagccgcatgagcaggcacaaccacctatcagtgtttggcaacaaggtcaaaatcaagct caggaacatccagcctggacacaacaacaggagttccaacaatccccagtaatgccacat tgggcatccccccctcagaaacagccacagtcttcttgggctcaacctcagagggagtca cagccccaaccaccttgggtttctcaggccaagcagcaagagccaacacagccatctgca aatgcatggactcagccacagagtccaattcaagcgcagcctccgtgggctcaacagact caaccgccaccacagcccacagcaccagtccagcaacccatgaatccttggccaccaatg ccagcccagtcccaaccacatccacagtggggacaagaacctgcttctcaacaacatcct caacaagtaataaactcttggactcctgcacagaatcaaattcagcctccctgggcacca actcagcctcaggcacatcctccatgggcaccgaaacctcaacagcaggcatcacagcca cctgtgagccaatgggcaccaccacaatctcaatctcaaccagcggtaaatgtttgggca ccccaacaccagcagagttcagttgcccaaaatgaaccccagaaattgcctccccaacca atcaagccatggagtccaactcagacctctcagcccgctcctccacgacgaatgaactca tacactactgggacaaaggcaccatctcctgttccagcaagcagtactatgtcaccctct gggtatggttcagcattcgagatgccagccttgagagggaaaggagctgaactgttcgcc aagaggcaatccagaatggagaagtacattgtggattcttccacagtgcagtccaataag gcaagaccatcttcacctactccttctttgccaatttcctggaaatattcgccaaattgc cgagctcccccgcctttggcatataatccaattcattcaccgtcatatccaccaggtgct atcaagcagcctccctcgtctagcccttcaacagcaaacaagaacaaaaacaaagataag caaaaacctgccccgaaaccacttcatgttcttgatgttatgaagcatcagccctatcag ctgaattcctccctttttacttatggcccagcagcagaaaaacttgctgcagaaaaggag gcagctgaaaagcttgctgctcaaaaagcagctgaagcccaggctcaggctcaagctcaa gctcaggcccaggcccaggcccaggcccaaattcaagcccaagcaataggtcctccaaat caaaaccaacaaatggcatataaccaaggtcctcccccttacggttttatgccacaacag gcccagcaaccctacggaatggctggtcagtcacctatgcatgatggcctttaccatcaa gccccttccaatgcatatcagcctgcccttaattcttatcaacaacatcctcatcaagtc ccatatcaacaagaataccacccccaacaagcttaccaacaacctcctttaaacccttac caacaagcaccaagccctccctaccaacagtcctccccacccccctatcatacaggtcct aatccagtatatcaagctggacctgcaccggccttccaaccagcccctagttcttatgtt gccccatcttacccggtagcaccaagggctgattctgcctccggaggcagtattattgct gctccaaagcccaaattttcagccaagaagagtgctgcccaggtgtggaagccaggcact cctgaaaaatag

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