Garra rufa (doctor fish): 141330917
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Entry
141330917 CDS
T11039
Symbol
spg7
Name
(RefSeq) mitochondrial inner membrane m-AAA protease component paraplegin
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141330917 (spg7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
grf03110
]
141330917 (spg7)
Peptidases and inhibitors [BR:
grf01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
141330917 (spg7)
Chaperones and folding catalysts [BR:
grf03110
]
Other chaperones and cochaperones
AAA proteases
141330917 (spg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_17
nSTAND3
RuvB_N
AAA_22
AAA_2
TIP49
AAA_16
Mg_chelatase
AAA_28
PglZ
ORC-CDC6-like
IstB_IS21
AAA_14
ABC_tran
DUF8203
NACHT
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
141330917
NCBI-ProteinID:
XP_073691818
LinkDB
All DBs
Position
3:13074410..13095880
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AA seq
791 aa
AA seq
DB search
MAALLLQRGSKCYDKQVWSLASRFRCFQTCRKLLESNVTSYLPLITPNKRGLKSGHIENI
LTKPLIPRLIGLEFHCRHKFVTNPVKLWKLLGTTHYFSTTNRRNEKKEGGKGKTPEEDEE
EKKRREQEDQMYRERLRTLFIIAVIMSLLNSINTSGGNISWNDFVNEMLAKGEVSRVQVV
PESDIVEIYLHPGAVIFGRPRLALMYRMQVANIDKFEEKLRAAEEELNIDNKDRIPVTYK
RTGFFGNALYALGMAAIGVAILWYIFRLAGMGGRDGGFSAFNQLKMAKFTIVDGKSGKGV
SFKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEA
QVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGFSN
TEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERK
EIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGYKSIDTFNFE
YAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGF
AQILPKDQYLFTKEQLFERMCMALGGRASEAITFNKVTTGAQDDLRKVTRVAYSMVKQYG
MVASVGQVSFPDSDDQGGIGRRPFSQGLQQQMDLEAKLLIAQAYRHTEKLLLDNRDKLIL
LANTLLEREVVNYDDIEALLGPSPFGPKKMIAPQSWVEAERDKQDTGEDEPRKPQRPLRK
DKDDDINLSPV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgctacttttgcagcgcggaagcaaatgttacgacaaacaggtttggtcctta
gcgtctcgtttcaggtgttttcaaacctgcagaaaacttctggagagcaatgtgacttca
tacttgcctttaataactccaaacaaacgaggtctaaaatcaggacacattgagaacatt
ttgacaaagcctttaataccgaggcttattggacttgaattccattgtcgccacaaattt
gtcacaaatcctgtgaaattgtggaaactattaggcactactcattatttcagcacaacc
aacagaagaaacgaaaagaaagagggtggaaaagggaagactccagaggaggatgaggaa
gagaaaaagagacgagagcaggaggaccagatgtatagggagcgactgcgtacactcttt
attattgctgtcatcatgagcttgctcaactccatcaacaccagtggggggaacatatcc
tggaatgattttgtaaatgaaatgttggccaaaggagaggtatcacgggtacaggtggta
ccagagagtgacattgtagagatctaccttcaccctggcgcagtcatcttcggcagacct
agacttgccctgatgtacagaatgcaggtggccaacattgacaagtttgaggagaagctt
agagcagcagaggaagagctaaatatagataacaaagacagaataccagtgacctacaag
cgcactggcttctttgggaatgctctctatgcactcggtatggctgccattggggttgcg
attctctggtacatctttcgactggcaggaatgggagggagagatggcggctttagcgca
tttaatcaattgaaaatggctaaattcactattgttgatgggaaatctgggaaaggtgta
agcttcaaagatgttgcaggaatgcatgaggccaagatggaagtcaaagagtttgtggac
tatctaaagaatccagatagataccttcagcttggggccaaagtacctaaggggtctctg
ctcttgggcccccctggctgtggtaaaactctgcttgctaaggcagtggcaacagaagct
caggtgccgttccttgccatggcaggttcagagtttgtggaggttattggaggccttggt
gctgcaagagtgcgaagtcttttcaaagaggctcgtgctcgcgcgccatgcatcgtctac
atcgatgagattgatgctgtggggaagaaacggtccacaaacatgtctggtttctcaaac
acagaggaagagcagacacttaaccagctacttgtggagatggatggaatgggtaccaca
gatcacgtgattgttctggcctccactaaccgggcagacattctggacaatgctctcatg
cgaccaggcaggcttgataggcacatatttatagacttgccaactcttcaggagagaaag
gaaatctttgagcagcacttgaagatcctaaagcttactcagccagcagacttctactcc
ctgcgtctggctgagttgacaccaggcttcagtggggctgacatcgccaacatctgcaat
gaagccgcccttcatgctgccagagaaggctacaagtctatagacacctttaactttgaa
tacgctgtggagagagtcatcgcagggagtgtgaagaagagtaaaatcttatctaaagaa
gagcagagggtggtggcttttcatgagtctggtcatgctttagtgggatggctgctggaa
cacaccgaagctgtcatgaaggtttcaattgctcccaggacgaatgctgctttgggcttt
gctcagatcctgccaaaggatcagtatttatttactaaagagcagctgtttgagaggatg
tgcatggctttgggtggacgagcgtctgaagccatcaccttcaataaggtcactacaggt
gctcaggatgacctgaggaaggtgacccgtgtggcatactccatggtgaagcagtatggc
atggttgccagtgtgggccaggtgtctttccctgactctgacgatcagggcggtattgga
cggagaccattcagccaaggactccaacagcagatggaccttgaagctaagttgctaata
gcacaggcctacaggcacacagagaaattgcttttggacaacagagacaaacttattttg
ctggctaataccctgctggagagagaagtggtcaactacgatgacattgaagctttgctg
ggaccttctccatttggacccaaaaagatgattgcccctcaaagctgggtggaggctgaa
agagacaagcaggacactggtgaagatgagccacgtaaaccccagagacccctccgcaaa
gacaaagatgatgatatcaacctgagcccagtgtga
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