Garra rufa (doctor fish): 141330918
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Entry
141330918 CDS
T11039
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04371
Apelin signaling pathway
grf04514
Cell adhesion molecules
grf04520
Adherens junction
grf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
141330918
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141330918
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
141330918
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
141330918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141330918
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141330918
04090 CD molecules [BR:
grf04090
]
141330918
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
141330918
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141330918
CD molecules [BR:
grf04090
]
Proteins
141330918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Cadherin_2
Glucodextran_B
TM_ErbB1
PBP-Tp47_a
Motif
Other DBs
NCBI-GeneID:
141330918
NCBI-ProteinID:
XP_073691819
LinkDB
All DBs
Position
3:complement(13800503..13810193)
Genome browser
AA seq
879 aa
AA seq
DB search
MACVKILRLGVIVFLCQVLSCGYAEESTCAPGFESELFVFKVHRDHLHRGKRLGRVTFNN
CDGRTRTLFESVDKRFDVNTDGTVTLKRQVTLHEGHKVFSVQAWDSNGKKYTASVKVERV
HDAVVNISFSEMELPSDQVLTFPKSSTGLRRAKRGWVIPPFHVPEHSRGPFPMKLVQIKS
DYALETQMVYTITGEGADQDPKGIFTVERLSGNLFVTQPLDREKKASYKLIAHAKARDVG
GIEEKPMDIVVNVIDQNDNKPVFTQNPFNGHVHEAAAKDYEFMTVTATDADDPDTHNGIV
NYAIISQDPPLPKSNMFDINVLSGTIRVRETGMDREQWPRYTLLIVAADMEGNGLSTTGT
AVITITDSNDSPPQFEQTSYVASVPENRVGAVVAKLTVTDGDEVGSPAWSTKYRIISGDK
GGFFNVSTGPSQLEGIITTVKPLDFEKTKQYILSVIVENDDPFVSSLPTSTATVTVDVQD
VNEPPEFNPKEKVIFKPEDVAVDTELVIYTATDPDTGKTQKITYRMGDDPAGWLSVAPDT
GVIKVRNLMDRESAYVKGGKYRAIVLAVDDDAASPATGTGTLLIELENVNDNPPVINERS
IQICNRGSAPVLLSITDKDGPPFAAPFSVETQGETSKNWSTSMNDTSTGVYLQLKTQLEQ
GEYNVVLRVYDQHRLYQDSSIHASVCECTGEEVHCINKVAAGIPLSGVLGILGGILALLL
LLLLLLLFMRKKRGTKKEPLLPEDDIRDNIYYYDEEGGGEDDQDYDLSVLHRGLDNRPEV
FRNDVAPTFLAAPQYRPRPANPEEIGTFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSDA
GSLSSLNSSSSGHDQDYDFLNEWGPRFKKLADMYGGGED
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtgtaaagattttgcgattaggagttatcgtttttctttgtcaggtattgtcg
tgtggatatgcggaggagtcaacatgtgcacctgggtttgagtcggagttattcgttttt
aaagtgcacagagatcaccttcacagggggaaaagactaggaagagttactttcaataac
tgtgatggaagaacaagaacgctctttgagtccgttgacaagcggtttgatgtgaacacg
gatgggactgtaacactaaagagacaagtgactcttcatgaaggtcacaaagtgttttct
gtgcaagcttgggactccaatggcaagaagtacactgcatctgtcaaagttgagcgtgtc
catgatgctgttgtgaacatctccttttcagagatggaattaccctctgatcaggttctc
acttttccaaagtcttcaacgggtctaaggagagcaaagagaggatgggttattcctcct
ttccatgtacctgagcatagcagaggtcctttcccaatgaagctggtccagataaagtca
gactatgccctggaaactcaaatggtatacacaatcacgggtgaaggagcagatcaggac
ccaaaggggattttcactgttgaaagattatcagggaatctttttgtgactcagccactt
gacagagaaaaaaaagcttcatacaaacttatagctcatgctaaagcacgtgatgtgggt
ggtatagaagaaaaaccaatggatattgtcgtcaatgtgatcgaccaaaatgataataag
ccggtgttcactcaaaacccttttaatggacatgttcatgaagctgctgcaaaagattat
gagtttatgactgtcacagccactgatgcagatgaccctgatacgcacaatggtatagtc
aactatgcaattatcagccaggatccaccgcttccaaaatcaaacatgtttgatatcaat
gttttatctggaaccattcgtgtgcgagaaacaggcatggacagagagcaatggcctaga
tatactttgttaattgtggctgctgacatggaaggaaatggtttgtcaaccactggcaca
gctgttattacgattactgacagcaatgatagccctcctcagtttgaacaaacctcgtac
gtcgcatccgtcccagagaatagggtaggggctgtagtagcaaaacttacagtaactgat
ggagatgaagtaggatcccctgcctggtcaaccaagtatcggattattagtggtgacaag
ggtgggtttttcaatgtcagtactggacccagccagctggagggtatcatcaccactgta
aagcccctggactttgagaagaccaagcaatacattctgtctgtgattgttgagaacgat
gatccttttgtcagttctttgcccacttccactgccacagtcacagtcgatgtacaagat
gtaaatgaacctcccgagttcaatccaaaggagaaggttattttcaaacctgaagatgtg
gcagtcgacactgaattggttatttatacagccactgatccagacactggaaaaacacag
aagataacgtatagaatgggtgatgatcctgctggttggctaagtgtggctccagatact
ggagtaattaaagtcagaaaccttatggatagagaatctgcctatgtcaaaggcggcaaa
tacagagctattgttttggccgtagatgatgatgcagcatctcctgcgaccggcacagga
accctgctaattgaactggagaatgtaaatgacaacccacctgttattaatgaaagaagt
atacaaatttgcaatcgtggatcagcgccggttcttctctctataacggacaaagacgga
cctccttttgctgcaccctttagcgttgaaacccaaggagaaactagtaaaaactggtcc
acctcgatgaatgacacatcaactggtgtttatcttcaactcaagactcagttggagcag
ggggaatacaatgtagtcctgagagtttatgatcaacatagactgtatcaggacagctcc
attcacgcatctgtgtgtgagtgcacaggagaagaagtccactgtattaacaaagtggca
gcaggaataccactgtctggagttcttgggatcctgggaggaatcttggctctgctgttg
ctcctccttctactgctattgttcatgaggaagaagcgcggtaccaaaaaagaacccctc
cttcctgaggatgatataagagacaacatctactattatgatgaggaaggtggtggagag
gacgatcaggattatgatttgagtgtcttgcatcgtggcctggacaacagacctgaagtt
ttcagaaatgatgtggcgcccactttcctggcagcacctcagtatagaccacgaccagcc
aaccctgaggagattgggacattcattgatgataatctgaaggctgcggataacgacccc
acagcacccccatacgactccctcctggtgtttgactatgaaggaggaggctcagatgca
ggttcactcagctccctcaactcttccagctcaggacacgaccaagactatgacttcctc
aatgagtggggcccacgctttaagaagctggcagacatgtatggaggaggagaggattaa
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