KEGG   Garra rufa (doctor fish): 141330918
Entry
141330918         CDS       T11039                                 
Name
(RefSeq) B-cadherin-like isoform X1
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04371  Apelin signaling pathway
grf04514  Cell adhesion molecules
grf04520  Adherens junction
grf05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    141330918
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    141330918
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    141330918
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    141330918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:grf03036]
    141330918
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:grf04515]
    141330918
   04090 CD molecules [BR:grf04090]
    141330918
Chromosome and associated proteins [BR:grf03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    141330918
Cell adhesion molecules [BR:grf04515]
 Cadherins
  Major cadherins
   141330918
CD molecules [BR:grf04090]
 Proteins
  141330918
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_4 Cadherin_2 Glucodextran_B TM_ErbB1 PBP-Tp47_a
Other DBs
NCBI-GeneID: 141330918
NCBI-ProteinID: XP_073691819
LinkDB
Position
3:complement(13800503..13810193)
AA seq 879 aa
MACVKILRLGVIVFLCQVLSCGYAEESTCAPGFESELFVFKVHRDHLHRGKRLGRVTFNN
CDGRTRTLFESVDKRFDVNTDGTVTLKRQVTLHEGHKVFSVQAWDSNGKKYTASVKVERV
HDAVVNISFSEMELPSDQVLTFPKSSTGLRRAKRGWVIPPFHVPEHSRGPFPMKLVQIKS
DYALETQMVYTITGEGADQDPKGIFTVERLSGNLFVTQPLDREKKASYKLIAHAKARDVG
GIEEKPMDIVVNVIDQNDNKPVFTQNPFNGHVHEAAAKDYEFMTVTATDADDPDTHNGIV
NYAIISQDPPLPKSNMFDINVLSGTIRVRETGMDREQWPRYTLLIVAADMEGNGLSTTGT
AVITITDSNDSPPQFEQTSYVASVPENRVGAVVAKLTVTDGDEVGSPAWSTKYRIISGDK
GGFFNVSTGPSQLEGIITTVKPLDFEKTKQYILSVIVENDDPFVSSLPTSTATVTVDVQD
VNEPPEFNPKEKVIFKPEDVAVDTELVIYTATDPDTGKTQKITYRMGDDPAGWLSVAPDT
GVIKVRNLMDRESAYVKGGKYRAIVLAVDDDAASPATGTGTLLIELENVNDNPPVINERS
IQICNRGSAPVLLSITDKDGPPFAAPFSVETQGETSKNWSTSMNDTSTGVYLQLKTQLEQ
GEYNVVLRVYDQHRLYQDSSIHASVCECTGEEVHCINKVAAGIPLSGVLGILGGILALLL
LLLLLLLFMRKKRGTKKEPLLPEDDIRDNIYYYDEEGGGEDDQDYDLSVLHRGLDNRPEV
FRNDVAPTFLAAPQYRPRPANPEEIGTFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSDA
GSLSSLNSSSSGHDQDYDFLNEWGPRFKKLADMYGGGED
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggcgtgtgtaaagattttgcgattaggagttatcgtttttctttgtcaggtattgtcg
tgtggatatgcggaggagtcaacatgtgcacctgggtttgagtcggagttattcgttttt
aaagtgcacagagatcaccttcacagggggaaaagactaggaagagttactttcaataac
tgtgatggaagaacaagaacgctctttgagtccgttgacaagcggtttgatgtgaacacg
gatgggactgtaacactaaagagacaagtgactcttcatgaaggtcacaaagtgttttct
gtgcaagcttgggactccaatggcaagaagtacactgcatctgtcaaagttgagcgtgtc
catgatgctgttgtgaacatctccttttcagagatggaattaccctctgatcaggttctc
acttttccaaagtcttcaacgggtctaaggagagcaaagagaggatgggttattcctcct
ttccatgtacctgagcatagcagaggtcctttcccaatgaagctggtccagataaagtca
gactatgccctggaaactcaaatggtatacacaatcacgggtgaaggagcagatcaggac
ccaaaggggattttcactgttgaaagattatcagggaatctttttgtgactcagccactt
gacagagaaaaaaaagcttcatacaaacttatagctcatgctaaagcacgtgatgtgggt
ggtatagaagaaaaaccaatggatattgtcgtcaatgtgatcgaccaaaatgataataag
ccggtgttcactcaaaacccttttaatggacatgttcatgaagctgctgcaaaagattat
gagtttatgactgtcacagccactgatgcagatgaccctgatacgcacaatggtatagtc
aactatgcaattatcagccaggatccaccgcttccaaaatcaaacatgtttgatatcaat
gttttatctggaaccattcgtgtgcgagaaacaggcatggacagagagcaatggcctaga
tatactttgttaattgtggctgctgacatggaaggaaatggtttgtcaaccactggcaca
gctgttattacgattactgacagcaatgatagccctcctcagtttgaacaaacctcgtac
gtcgcatccgtcccagagaatagggtaggggctgtagtagcaaaacttacagtaactgat
ggagatgaagtaggatcccctgcctggtcaaccaagtatcggattattagtggtgacaag
ggtgggtttttcaatgtcagtactggacccagccagctggagggtatcatcaccactgta
aagcccctggactttgagaagaccaagcaatacattctgtctgtgattgttgagaacgat
gatccttttgtcagttctttgcccacttccactgccacagtcacagtcgatgtacaagat
gtaaatgaacctcccgagttcaatccaaaggagaaggttattttcaaacctgaagatgtg
gcagtcgacactgaattggttatttatacagccactgatccagacactggaaaaacacag
aagataacgtatagaatgggtgatgatcctgctggttggctaagtgtggctccagatact
ggagtaattaaagtcagaaaccttatggatagagaatctgcctatgtcaaaggcggcaaa
tacagagctattgttttggccgtagatgatgatgcagcatctcctgcgaccggcacagga
accctgctaattgaactggagaatgtaaatgacaacccacctgttattaatgaaagaagt
atacaaatttgcaatcgtggatcagcgccggttcttctctctataacggacaaagacgga
cctccttttgctgcaccctttagcgttgaaacccaaggagaaactagtaaaaactggtcc
acctcgatgaatgacacatcaactggtgtttatcttcaactcaagactcagttggagcag
ggggaatacaatgtagtcctgagagtttatgatcaacatagactgtatcaggacagctcc
attcacgcatctgtgtgtgagtgcacaggagaagaagtccactgtattaacaaagtggca
gcaggaataccactgtctggagttcttgggatcctgggaggaatcttggctctgctgttg
ctcctccttctactgctattgttcatgaggaagaagcgcggtaccaaaaaagaacccctc
cttcctgaggatgatataagagacaacatctactattatgatgaggaaggtggtggagag
gacgatcaggattatgatttgagtgtcttgcatcgtggcctggacaacagacctgaagtt
ttcagaaatgatgtggcgcccactttcctggcagcacctcagtatagaccacgaccagcc
aaccctgaggagattgggacattcattgatgataatctgaaggctgcggataacgacccc
acagcacccccatacgactccctcctggtgtttgactatgaaggaggaggctcagatgca
ggttcactcagctccctcaactcttccagctcaggacacgaccaagactatgacttcctc
aatgagtggggcccacgctttaagaagctggcagacatgtatggaggaggagaggattaa

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