Garra rufa (doctor fish): 141330949
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Entry
141330949 CDS
T11039
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141330949
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141330949
NCBI-ProteinID:
XP_073691863
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Position
3:complement(15338124..15366639)
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AA seq
618 aa
AA seq
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MSEARLMPSPICLVENVNGSLNVCKDAIEFLSRINEPVVVVSVVGLYRTGKSYLMNRLAG
QQSGFALGNTIESKTKGIWMWCVPHPNKEGHTLVLLDTEGLGDVDKGDSKNDSWIFCLAV
LLSSTLVYNSRGTIDNNALENLHYVAELADKIKISSTADEEEDENSKYVQFFPSFIWAVR
DFTLELVIDKKTVTADEYLEFALQLKKGVSSKINNYNLPRQCIRSYFPSRNCFVFPSPAS
PENMKRLESLQERDLVPDFLEITSHFCKHIFYNSVVKTLKGGHKVTGKLLGHLVEIYVDT
INSGKVPCLDNAVIALANQENQTAVQEALKVYQSGMEEVKNKFPVGVDDISSEHQKFSSL
ATREFMKCSFKDEKREYLNKLKEDIDTYYMCLLQENDMASERKCRGLLKDLFSDMNKRLQ
EGKYSQSGGYKLYCRDRDTIVQQYRREPNKGVSAEAMLNEFLNERGPEANSILYTDTKIT
ENDRKIQEEKEKNALLQQNLKEEEEKRIESERMRKAEMERQEDQIKQMQEKFNKELEQQQ
QEMEKAIECKLNEQQEMVKKGFDERADLLNEEITSLKKEKESSGGFMKEYVMPLLGTVTE
LLPAFLNYRVLMKGLKKV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccagactaatgccttcgcctatatgtttggtggagaatgtgaatggatca
cttaacgtctgtaaggacgccattgagtttctgagtaggatcaatgagccggtggtggtg
gtgtctgtggtgggcctctaccgtacagggaaatcctatcttatgaaccgcctggcagga
caacagtcaggctttgctcttggcaatactattgagtcgaaaaccaaaggcatctggatg
tggtgtgtccctcacccaaataaagaaggacacactctggtgctgttggacacggaggga
ctaggtgatgtggacaagggtgactctaagaatgacagctggatcttctgtctggctgtt
ctactcagcagcactctggtgtacaacagccgcggcaccatcgataacaatgcactggag
aatctgcactatgttgctgagcttgctgacaaaatcaagatcagttcgacagcagatgag
gaggaagatgagaattctaagtatgtgcagtttttcccatcattcatttgggctgtgaga
gatttcaccttggaattggtaattgataaaaaaacagtgactgcggacgagtaccttgaa
tttgccctccagctgaagaaaggtgtgagctccaaaatcaacaactacaacctgcctcgt
caatgcatccgaagctatttcccatcccggaactgttttgtattcccatctccagcatcg
cctgaaaacatgaaacgtttagaaagcttgcaagaacgagaccttgtacctgactttctg
gagatcacgagtcatttctgtaaacacattttttacaatagtgttgtgaaaacactgaaa
ggaggacacaaagttactggcaaattactcgggcatctggttgagatttatgtagacaca
atcaacagtggcaaagttccctgtctggacaatgcagttattgctcttgcaaatcaagag
aaccagacagctgttcaagaagctctgaaagtgtatcagagtgggatggaagaggtgaag
aacaagttcccagtaggtgtggatgatatttcctcagaacaccaaaagttcagcagtctg
gccaccagggagtttatgaaatgctcctttaaagatgaaaaaagagaatacctgaataaa
ctgaaggaagacatagatacgtactatatgtgtctgctgcaagagaatgacatggcatca
gagagaaagtgcagaggtctgctgaaggatctgttctctgacatgaataagcgactgcag
gagggaaagtacagtcagtctggaggatataaactctactgcagagacagagacaccatc
gttcagcagtaccgcagagaacccaataaaggtgtttcggctgaggccatgctgaatgag
tttctgaatgagcgaggacctgaagcaaacagcatcctctacacagacacaaaaatcact
gaaaatgacagaaagattcaagaggaaaaggaaaagaatgctctgctgcaacagaatttg
aaagaggaagaagagaaacgcatcgagagtgagcgaatgaggaaggcagagatggagcgg
caggaggaccaaattaagcagatgcaggagaagttcaacaaggagctggagcagcagcag
caggagatggagaaagccattgagtgcaaactaaatgagcagcaggagatggtaaagaaa
ggctttgatgagagagctgatctcctgaatgaagagataacgagtctaaaaaaagaaaag
gaaagttccggtggttttatgaaggaatatgtaatgcctcttttaggaactgtgacagaa
ctccttccagctttccttaattatagagtgctgatgaaaggactcaaaaaagtataa
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